Sequence of DPV Mesta yellow vein mosaic virus
Okra enation leaf curl virus [India:Munthal EL39:2006] segment DNA-A, complete sequence.
ACC No: GU112001
Dated: 2012-05-20 | Length: 2723 | CRC: 1633732825
ID GU112001; SV 1; circular; genomic DNA; STD; VRL; 2723 BP.
XX
AC GU112001;
XX
DT 02-JAN-2011 (Rel. 107, Created)
DT 20-MAY-2012 (Rel. 112, Last updated, Version 2)
XX
DE Okra enation leaf curl virus [India:Munthal EL39:2006] segment DNA-A,
DE complete sequence.
XX
KW .
XX
OS Okra enation leaf curl virus [India:Munthal EL39:2006]
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus;
OC unclassified Begomovirus.
XX
RN [1]
RP 1-2723
RX PUBMED; 22447131.
RA Venkataravanappa V., Lakshminarayana Reddy C.N., Jalali S.,
RA Krishna Reddy M.;
RT "Molecular characterization of distinct bipartite begomovirus infecting
RT bhendi (Abelmoschus esculentus L.) in India";
RL Virus Genes 44(3):522-535(2012).
XX
RN [2]
RP 1-2723
RA Venkataravanappa V., Lakshiminarayanareddy C.N., Devaraju, Swaranalatha P.,
RA Jalali S., Krishnareddy M.;
RT "Molecular genetic diversity of begomoviruses infecting okra in India";
RL Unpublished.
XX
RN [3]
RP 1-2723
RA Venkataravanappa V., Lakshiminarayanareddy C.N., Devaraju, Swaranalatha P.,
RA Jalali S., Krishnareddy M.;
RT ;
RL Submitted (26-SEP-2009) to the INSDC.
RL Division of Plant Pathology, Indian Institute of Horticultural Research,
RL Hessaraghatta Lake PO, Bangalore, Karnataka 560089, India
XX
FH Key Location/Qualifiers
FH
FT source 1. .2723
FT /organism="Okra enation leaf curl virus [India:Munthal
FT EL39:2006]"
FT /segment="DNA-A"
FT /host="Abelmoschus esculentus (okra)"
FT /isolate="EL39"
FT /mol_type="genomic DNA"
FT /country="India:Munthal, Haryana"
FT /isolation_source="leaf"
FT /collected_by="M.Krishnareddy"
FT /collection_date="2006"
FT /db_xref="taxon:908129"
FT gene 121. .486
FT /gene="AV2"
FT CDS 121. .486
FT /codon_start=1
FT /gene="AV2"
FT /product="precoat protein"
FT /db_xref="GOA:E7BNG7"
FT /db_xref="InterPro:IPR002511"
FT /db_xref="InterPro:IPR005159"
FT /db_xref="UniProtKB/TrEMBL:E7BNG7"
FT /protein_id="ADO40491.1"
FT /translation="MWDPLLNEFPETVHGFRCMLAIKYLQQLSEEYSPDTVGYDLIRDL
FT ISILRCRNYVEASCRYRHFYPRVEGASSTELRQPVFNPCSCPHCPRHKITNVGQQTHVP
FT EAQNVQDIQKPGCSKRM"
FT gene 281. .1039
FT /gene="AV1"
FT CDS 281. .1039
FT /codon_start=1
FT /gene="AV1"
FT /product="coat protein"
FT /db_xref="GOA:E7BNG8"
FT /db_xref="InterPro:IPR000263"
FT /db_xref="InterPro:IPR000650"
FT /db_xref="UniProtKB/TrEMBL:E7BNG8"
FT /protein_id="ADO40492.1"
FT /translation="MSKRPADIVISTPASKVRRRLNFDSPYSTRAVAPTVRVTKSRMWA
FT NRPMYRKPRMYRIYRSPDVPRGCEGPCKVQSFDAKNDIGHMGKVICLSDVTRGIGLTHR
FT VGKRFCVKSLICRENIKTKNHTYTVMFWIVRDRRPTGTPYDFQQVFNVYDNEPSTATVK
FT NDQRDRFQVLRRFQATVTGRQYACKEQFKIRKFYRVNNYWVYNHQEAGKYENHTENALL
FT LYMACTHASNPVYATLKVRSYFYDSVTNSY"
FT gene complement(1036. .1440)
FT /gene="AC3"
FT CDS complement(1036. .1440)
FT /codon_start=1
FT /gene="AC3"
FT /product="replication enhancer protein"
FT /db_xref="GOA:E7BNG9"
FT /db_xref="InterPro:IPR000657"
FT /db_xref="UniProtKB/TrEMBL:E7BNG9"
FT /protein_id="ADO40493.1"
FT /translation="MDSRTGERITAAHTRNGVFIWEVPNPLYFKILSHDDRPFTTNMDI
FT IKIRIQFNYNLRRVLGVHKCFLTFRVWTTLHPQNGIFLRVFKTQVLKYLNHLGVISINL
FT VIKAVEHVLYNVIQQTMYVDQYSDIKFDLY"
FT gene complement(1133. .1585)
FT /gene="AC2"
FT CDS complement(1133. .1585)
FT /codon_start=1
FT /gene="AC2"
FT /product="transcription activator protein"
FT /db_xref="GOA:E7BNH0"
FT /db_xref="InterPro:IPR000942"
FT /db_xref="UniProtKB/TrEMBL:E7BNH0"
FT /protein_id="ADO40494.1"
FT /translation="MRSSSPLKDHCTQVPIKVQHREAKRAHRRKRVDLECGCSYYLSIN
FT CFNHGFSHRGTHHCSSYKEWRLYLGGSKSPLFQDPQPRRPSIHDEHGHNKNQDPIQLQP
FT SESAGSAQVFSDLPGLDDLTPSEWYFLKGIQNPSPQVSQPSRCNLN"
FT gene complement(1482. .2570)
FT /gene="AC1"
FT CDS complement(1482. .2570)
FT /codon_start=1
FT /gene="AC1"
FT /product="replicase"
FT /db_xref="GOA:E7BNH1"
FT /db_xref="InterPro:IPR001191"
FT /db_xref="InterPro:IPR001301"
FT /db_xref="InterPro:IPR022690"
FT /db_xref="InterPro:IPR022692"
FT /db_xref="UniProtKB/TrEMBL:E7BNH1"
FT /protein_id="ADO40495.1"
FT /translation="MPPKRFLINSKNYFLTYPKCSLTKEEALSQIKNFQTPTSKKYIKI
FT CRELHENGEPHLHVLIQFEGKYKCQNQRFFDLVSPSRSAHFHPNIQGAKSSSDVKSYID
FT KDGDTLEWGEFQIDGRSARGGQQTANDAYAAALNAGSKSEALRVIKELAPKDYVLQFHN
FT LNANLDRIFTPPVEVYVSPFSSSSLDQVPEELEEWAAENVVDAAARPHRPQSIVIEGDS
FT RTGKTMWARSLGPHNYLCGHLDLSPKVYSNEAWYNVIDDVDPHFLKHFKEFMGAQRDWQ
FT SNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEFLDEDKNSALKNWAVKNAIFVTLEGPLY
FT SGTNQSTAQGSEESAQEEESRS"
FT gene complement(2114. .2416)
FT /gene="AC4"
FT CDS complement(2114. .2416)
FT /codon_start=1
FT /gene="AC4"
FT /product="AC4 protein"
FT /db_xref="InterPro:IPR002488"
FT /db_xref="UniProtKB/TrEMBL:E7BNH2"
FT /protein_id="ADO40496.1"
FT /translation="MGNLICTCSSSSRGNTSARISDSSTWSPQAGQHISIRTYRELNPA
FT PTSNPTSTRTGTLSSGESFRSTDDLLEGDNRQPTTLTPQRLTQAVSQRLLESLRS"
XX
SQ Sequence 2723 BP; 705 A; 582 C; 637 G; 799 T; 0 other;
gu112001 Length: 2723 20-MAY-2012 Type: N Check: 9546 ..
1 accggatggc cgcgcgattt tttttagtgg tgggtccaga acgcacgacg
51 atgcagactc aaagcttaga taacgctcct ttcgctataa gtacttgcgc
101 actaagtttc aaactgaaac atgtgggatc cattgttaaa cgagttccct
151 gagacggttc acgggtttcg ttgcatgctt gctattaaat atcttcaaca
201 actgtctgag gaatactctc ctgatacggt tgggtacgat ctaattcgcg
251 atctaatttc tattttacgt tgtaggaatt atgtcgaagc gtcctgccga
301 tatcgtcatt tctacccccg cgtcgaaggt gcgtcgtcga ctgaacttcg
351 acagcccgta ttcaacccgt gcagttgccc ccactgtccg cgtcacaaaa
401 tcacgaatgt gggccaacag acccatgtac cggaagccca gaatgtacag
451 gatatacaga agcccggatg ttccaagagg atgtgaaggc ccatgtaagg
501 tgcagtcttt tgatgcgaag aacgatattg gtcacatggg taaggttatc
551 tgtctatctg atgttactag gggtattggg ctgacccatc gagtagggaa
601 acgtttctgc gtgaagtcat tgatttgcag ggagaacatc aagactaaga
651 accatacgta caccgttatg ttttggatcg tgagagacag gcgtcctaca
701 ggcaccccct acgatttcca gcaagtgttc aatgtttatg acaacgagcc
751 ttctacggct actgtaaaga acgaccagcg tgatcgattc caggttttga
801 ggaggtttca ggcaacagtt actggacgac agtatgcttg taaggaacaa
851 tttaaaatta ggaaattcta tcgtgttaac aattactggg tgtataatca
901 ccaggaagct gggaagtatg aaaatcacac tgagaatgct ttgttgttgt
951 atatggcatg tactcatgcc tctaaccctg tgtatgctac tttgaaagtt
1001 aggagttact tctacgattc tgtaacgaat tcgtattaat aaagatcgaa
1051 ttttatatct gaatattgat ccacatacat tgtttgttga attacattgt
1101 acaatacgtg ttctacagcc ttaattacta aattaattga gattacacct
1151 agatggttga gatacttgag gacttgggtt ttgaataccc ttaagaaaat
1201 accattctga gggtgtaagg tcgtccagac ccggaaggtc agaaaacact
1251 tgtgcactcc cagcactctc cgaaggttgt agttgaattg gatcctgatt
1301 tttattatgt ccatgttcgt cgtgaatgga cggtcgtcgt ggctgaggat
1351 cttgaaatag aggggatttg gaacctccca gataaagacg ccattccttg
1401 tatgagctgc agtgatgcgt tcccctgtgc gagaatccat ggttgaagca
1451 gttaatggat agataataag aacacccgca ttcaagatct actctcttcc
1501 tcctgtgcgc tctcttcgct tccctgtgct gtactttgat tggtacctga
1551 gtacaatggt ccttcaaggg tgacgaagat cgcatttttc actgcccagt
1601 tctttagtgc tgagttctta tcctcgtcta agaactcttt ataactgctg
1651 ttgggaccag gattgcagag gaagattgtt ggtatgccgc ctttaatttg
1701 aactggcttt ccgtactttg tgttggattg ccagtccctt tgggccccca
1751 tgaactcttt aaagtgtttg aggaagtggg gatctacgtc atcaatgacg
1801 ttataccagg cctcgttact gtagaccttt ggactaaggt ctagatgccc
1851 acacaaatag ttatgtggac ccagtgatct agcccacatc gtcttcccgg
1901 tacgactatc tccctcaatc actatacttt gtggtctatg tggccgcgca
1951 gcggcgtcga caacgttctc ggcagcccat tcctcaagtt cttccggaac
2001 ttgatccaaa gaagaagaag aaaaaggaga aacataaacc tccacaggag
2051 gtgtaaaaat cctatctaaa ttagcattta aattatggaa ttgtaataca
2101 taatcttttg gagctaactc cttaatgact ctaagagcct ctgacttact
2151 gcctgcgtta agcgctgcgg cgtaagcgtc gttggctgtc tgttgtcccc
2201 ctctagcaga tcgtccgtcg atctgaaact ctccccactc gagagtgtcc
2251 ccgtccttgt cgatgtagga tttgacgtcg gagctggatt tagctccctg
2301 tatgttcgga tggaaatgtg ctgacctgct tggggagacc aggtcgaaga
2351 atcgctgatt ctggcacttg tatttcccct cgaactggat gagcacgtgc
2401 agatgaggtt ccccattttc atgaagttct ctgcagattt taatatattt
2451 ttttgaagtg ggggtttgga aattcttgat ttgggaaagt gcttcttctt
2501 tggtgagaga gcacttggga taagtgagga aataattttt ggagttaata
2551 aggaaacgct taggaggcat gttgactaag atagaggacc cgattgaccg
2601 ctcttgcaac tctcccctgt atatcgggtc tcaatatata gtgagaccca
2651 aatggcaaaa ttgtaattgt gggaataaat tcaaaatcct cacgctccaa
2701 aaagcggcca tccgtataat att