Sequence of DPV Mesta yellow vein mosaic virus
Okra enation leaf curl virus [India:Munthal EL38:2006] segment DNA-A, complete sequence.
ACC No: GU112002
Dated: 2012-05-20 | Length: 2724 | CRC: 1146421377
ID GU112002; SV 1; circular; genomic DNA; STD; VRL; 2724 BP.
XX
AC GU112002;
XX
DT 02-JAN-2011 (Rel. 107, Created)
DT 20-MAY-2012 (Rel. 112, Last updated, Version 2)
XX
DE Okra enation leaf curl virus [India:Munthal EL38:2006] segment DNA-A,
DE complete sequence.
XX
KW .
XX
OS Okra enation leaf curl virus [India:Munthal EL38:2006]
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus;
OC unclassified Begomovirus.
XX
RN [1]
RP 1-2724
RX PUBMED; 22447131.
RA Venkataravanappa V., Lakshminarayana Reddy C.N., Jalali S.,
RA Krishna Reddy M.;
RT "Molecular characterization of distinct bipartite begomovirus infecting
RT bhendi (Abelmoschus esculentus L.) in India";
RL Virus Genes 44(3):522-535(2012).
XX
RN [2]
RP 1-2724
RA Venkataravanappa V., Lakshiminarayanareddy C.N., Devaraju, Swaranalatha P.,
RA Jalali S., Krishnareddy M.;
RT "Molecular genetic diversity of begomoviruses infecting okra in India";
RL Unpublished.
XX
RN [3]
RP 1-2724
RA Venkataravanappa V., Lakshiminarayanareddy C.N., Devaraju, Swaranalatha P.,
RA Jalali S., Krishnareddy M.;
RT ;
RL Submitted (26-SEP-2009) to the INSDC.
RL Division of Plant Pathology, Indian Institute of Horticultural Research,
RL Hessaraghatta Lake PO, Bangalore, Karnataka 560089, India
XX
FH Key Location/Qualifiers
FH
FT source 1. .2724
FT /organism="Okra enation leaf curl virus [India:Munthal
FT EL38:2006]"
FT /segment="DNA-A"
FT /host="Abelmoschus esculentus (okra)"
FT /isolate="EL38"
FT /mol_type="genomic DNA"
FT /country="India:Munthal, Haryana"
FT /isolation_source="leaf"
FT /collected_by="M.Krishnareddy"
FT /collection_date="2006"
FT /db_xref="taxon:908128"
FT gene 121. .486
FT /gene="AV2"
FT CDS 121. .486
FT /codon_start=1
FT /gene="AV2"
FT /product="precoat protein"
FT /db_xref="GOA:E7BNH3"
FT /db_xref="InterPro:IPR002511"
FT /db_xref="InterPro:IPR005159"
FT /db_xref="UniProtKB/TrEMBL:E7BNH3"
FT /protein_id="ADO40497.1"
FT /translation="MWDPLLNEFPETVHGFRCMLAIKYLQQLSEEYSPDTVGYDLIRDL
FT ISILRCRNYVEASCRYRHFYPRVEGASSTELRQPVFNPCSCPHCPRHKITNVGQQTHVP
FT EAQNVQDIQKPGCSKRM"
FT gene 281. .1033
FT /gene="AV1"
FT CDS 281. .1033
FT /codon_start=1
FT /gene="AV1"
FT /product="coat protein"
FT /db_xref="GOA:E7BNH4"
FT /db_xref="InterPro:IPR000263"
FT /db_xref="InterPro:IPR000650"
FT /db_xref="UniProtKB/TrEMBL:E7BNH4"
FT /protein_id="ADO40498.1"
FT /translation="MSKRPADIVISTPASKVRRRLNFDSPYSTRAVAPTVRVTKSRMWA
FT NRPMYRKPRMYRIYRSPDVPRGCEGPCKVQSFDAKNDIGHMGKVICLSDVTRGIGLTHR
FT VGKRFCVKSLICRENIKTKNHTYTVMFWIVRDRRPTGTPYDFQQVFNVYDNEPSTATVK
FT NDQRDRFQVLRRFQATVTGRQYACKEQFKIRKFYRVNNYWVYNHQEAGKYENHTENALL
FT LYMACTHASNPVYATLKVRSYFYDSVTN"
FT gene complement(1037. .1441)
FT /gene="AC3"
FT CDS complement(1037. .1441)
FT /codon_start=1
FT /gene="AC3"
FT /product="replication enhancer protein"
FT /db_xref="GOA:E7BNH5"
FT /db_xref="InterPro:IPR000657"
FT /db_xref="UniProtKB/TrEMBL:E7BNH5"
FT /protein_id="ADO40499.1"
FT /translation="MDSRTGERITAAHTRNGVFIWEVPNPLYFKILSHDDRPFTTNMDI
FT IKIRIQFNYNLRRALGVHKCFLTFRVWTTLHPQNGIFLRVFKTQVLKYLNHLGVISINL
FT VIKAVEHVLYNVIQQTMYVDQYSDIKFDLY"
FT gene complement(1134. .1586)
FT /gene="AC2"
FT CDS complement(1134. .1586)
FT /codon_start=1
FT /gene="AC2"
FT /product="transcription activator protein"
FT /db_xref="GOA:E7BNH6"
FT /db_xref="InterPro:IPR000942"
FT /db_xref="UniProtKB/TrEMBL:E7BNH6"
FT /protein_id="ADO40500.1"
FT /translation="MRSSSPLKDHCTQVPIKVQHREAKRAHRRKRVDLECGCSYYLSIN
FT CFNHGFSHRGTHHCSSYKEWRLYLGGSKSPLFQDPQPRRPSIHDEHGHNKNQDPIQLQP
FT SESSGSAQVFSDLPGLDDLTPSEWYFLKGIQNPSPQVSQPSRCNLN"
FT gene complement(1483. .2571)
FT /gene="AC1"
FT CDS complement(1483. .2571)
FT /codon_start=1
FT /gene="AC1"
FT /product="replicase"
FT /db_xref="GOA:E7BNH7"
FT /db_xref="InterPro:IPR001191"
FT /db_xref="InterPro:IPR001301"
FT /db_xref="InterPro:IPR022690"
FT /db_xref="InterPro:IPR022692"
FT /db_xref="UniProtKB/TrEMBL:E7BNH7"
FT /protein_id="ADO40501.1"
FT /translation="MPPKRFLINSKNYFLTYPKCSLTKEEALSQIKNFQTPTSKKYIKI
FT CRELHENGEPHLHVLIQIEGKYKCQNQRFFDLVSPSRSAHFHPNIQGAKSSSDVKSYID
FT KDGDTLEWGEFQIDGRSARGGQQTANDADAAALNAGSKSEALRVIKELAPKDYVLQFHN
FT LNANLDRIFTPPVEVYVSPFSSSSFDQVPEELEEWAAENVVDAAARPHRPQSIVIEGDS
FT RTGKTMWARSLGPHNYLCGHLDLSPKVYSNEAWYNVIDDVDPHFLKHFKEFMGAQRDWQ
FT SNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEFLDEDKNSALKNWAVKNAIFVTLEGPLY
FT SGTNQSTAQGSEESAQEEESRS"
FT gene complement(2115. .2417)
FT /gene="AC4"
FT CDS complement(2115. .2417)
FT /codon_start=1
FT /gene="AC4"
FT /product="AC4 protein"
FT /db_xref="InterPro:IPR002488"
FT /db_xref="UniProtKB/TrEMBL:E7BNH8"
FT /protein_id="ADO40502.1"
FT /translation="MGNLICTCSSRSRGNTSARISDSSTWSPQAGQHISIRTYRELNPA
FT PTSNPTSTRTGTLSSGESFRSTDDLLEGDNRQPTTLTPQRLTQAVSQRLLESLRS"
XX
SQ Sequence 2724 BP; 706 A; 579 C; 638 G; 801 T; 0 other;
gu112002 Length: 2724 20-MAY-2012 Type: N Check: 3940 ..
1 accggatggc cgcgcgattt tttttagtgg tgggtccaga acgcacgacg
51 atgcagactc aaagcttaga taacgctcct ttcgctataa gtacttgcgc
101 actaagtttc aaattgaaac atgtgggatc cattgttaaa cgagttccct
151 gagacggttc acgggtttcg ttgcatgctt gctattaaat atcttcaaca
201 actgtctgag gaatactctc ctgatacggt tgggtacgat ctaattcgcg
251 atctaatttc tattttacgt tgtaggaatt atgtcgaagc gtcctgccga
301 tatcgtcatt tctacccccg cgtcgaaggt gcgtcgtcga ctgaacttcg
351 acagcccgta ttcaacccgt gcagttgccc ccactgtccg cgtcacaaaa
401 tcacgaatgt gggccaacag acccatgtac cggaagccca gaatgtacag
451 gatatacaga agcccggatg ttccaagagg atgtgaaggc ccatgtaagg
501 tgcagtcttt tgatgcgaag aacgatattg gtcacatggg taaggttatc
551 tgtctatctg atgttactag gggtattggg ctgacccatc gagtagggaa
601 acgtttctgc gtgaagtcat tgatttgcag ggagaacatc aagactaaga
651 accatacgta caccgttatg ttttggatcg tgagagacag gcgtcctaca
701 ggcaccccct acgatttcca gcaagtgttc aatgtttatg acaacgagcc
751 ttctacggct actgtaaaga acgaccagcg tgatcgattc caggttttga
801 ggaggtttca ggcaacagtt actggacgac agtatgcttg taaggaacaa
851 tttaaaatta ggaaattcta tcgtgttaac aattactggg tgtataatca
901 ccaggaagct gggaagtatg aaaatcacac tgagaatgct ttgttgttgt
951 atatggcatg tactcatgcc tctaaccctg tgtatgctac tttgaaagtt
1001 aggagttact tctacgattc tgtaacgaat taagtattaa taaagatcga
1051 attttatatc tgaatattga tccacataca ttgtttgttg aattacattg
1101 tacaatacgt gttctacagc cttaattact aaattaattg agattacacc
1151 tagatggttg agatacttga ggacttgggt tttgaatacc cttaagaaaa
1201 taccattctg agggtgtaag gtcgtccaga cccggaaggt cagaaaacac
1251 ttgtgcactc ccagagctct ccgaaggttg tagttgaatt ggatcctgat
1301 ttttattatg tccatgttcg tcgtgaatgg acggtcgtcg tggctgagga
1351 tcttgaaata gaggggattt ggaacctccc agataaagac gccattcctt
1401 gtatgagctg cagtgatgcg ttcccctgtg cgagaatcca tggttgaagc
1451 agttaatgga tagataataa gaacacccgc attcaagatc tactctcttc
1501 ctcctgtgcg ctctcttcgc ttccctgtgc tgtactttga ttggtacctg
1551 agtacaatgg tccttcaagg gtgacgaaga tcgcattttt cactgcccag
1601 ttctttagtg ctgagttctt atcctcgtct aagaactctt tataactgct
1651 gttgggacca ggattgcaga ggaagattgt tggtatgccg cctttaattt
1701 gaactggctt tccgtacttt gtgttggatt gccagtccct ttgggccccc
1751 atgaactctt taaagtgttt gaggaagtgg ggatctacgt catcaatgac
1801 gttataccag gcctcgttac tgtagacctt tggactaagg tctagatgcc
1851 cacacaaata gttatgtgga cccagtgatc tagcccacat cgtcttcccg
1901 gtacgactat ctccctcaat cactatactt tgtggtctat gtggccgcgc
1951 agcggcgtcg acaacgttct cggcagccca ttcctcaagt tcttccggaa
2001 cttgatcaaa agaagaagaa gaaaaaggag aaacataaac ctccacagga
2051 ggtgtaaaaa tcctatctaa attagcattt aaattatgga attgtaatac
2101 ataatctttt ggagctaact ccttaatgac tctaagagcc tctgacttac
2151 tgcctgcgtt aagcgctgcg gcgtcagcgt cgttggctgt ctgttgtccc
2201 cctctagcag atcgtccgtc gatctgaaac tctccccact cgagagtgtc
2251 cccgtccttg tcgatgtagg atttgacgtc ggagctggat ttagctccct
2301 gtatgttcgg atggaaatgt gctgacctgc ttggggagac caggtcgaag
2351 aatcgctgat tctggcactt gtatttcccc tcgatctgga tgagcacgtg
2401 cagatgaggt tccccatttt catgaagttc tctgcagatt ttaatatatt
2451 tttttgaagt gggggtttgg aaattcttga tttgggaaag tgcttcttct
2501 ttggtgagag agcacttggg ataagtgagg aaataatttt tggagttaat
2551 aaggaaacgc ttaggaggca tgttgactaa gatagaggac ccgattgacc
2601 gctcttgcaa ctctcccctg tatatcgggt ctcaatatat agtgagaccc
2651 aaatggcaaa attgtaattg tgggaataaa ttcaaaatcc tcacgctcca
2701 aaaagcggcc atccgtataa tatt