Sequence of DPV Bhendi yellow vein mosaic virus
Bhendi yellow vein India virus [India:Jalgov:OY124:2006] segment DNA-A, complete sequence.
ACC No: GU112033
Dated: 2012-05-20 | Length: 2743 | CRC: 59352492
ID GU112033; SV 1; circular; genomic DNA; STD; VRL; 2743 BP.
XX
AC GU112033;
XX
DT 02-JAN-2011 (Rel. 107, Created)
DT 20-MAY-2012 (Rel. 112, Last updated, Version 2)
XX
DE Bhendi yellow vein India virus [India:Jalgov:OY124:2006] segment DNA-A,
DE complete sequence.
XX
KW .
XX
OS Bhendi yellow vein India virus [India:Jalgov:OY124:2006]
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus;
OC unclassified Begomovirus.
XX
RN [1]
RP 1-2743
RX PUBMED; 22447131.
RA Venkataravanappa V., Lakshminarayana Reddy C.N., Jalali S.,
RA Krishna Reddy M.;
RT "Molecular characterization of distinct bipartite begomovirus infecting
RT bhendi (Abelmoschus esculentus L.) in India";
RL Virus Genes 44(3):522-535(2012).
XX
RN [2]
RP 1-2743
RA Venkataravanappa V., Lakshiminarayanareddy C.N., Devaraju, Swaranalatha P.,
RA Jalali S., Krishnareddy M.;
RT "Molecular genetic diversity of begomoviruses infecting okra in India";
RL Unpublished.
XX
RN [3]
RP 1-2743
RA Venkataravanappa V., Lakshiminarayanareddy C.N., Devaraju, Swaranalatha P.,
RA Jalali S., Krishnareddy M.;
RT ;
RL Submitted (30-SEP-2009) to the INSDC.
RL Division of Plant Pathology, Indian Institute of Horticultural Research,
RL Hessaraghatta Lake PO, Bangalore, Karnataka 560089, India
XX
FH Key Location/Qualifiers
FH
FT source 1. .2743
FT /organism="Bhendi yellow vein India virus
FT [India:Jalgov:OY124:2006]"
FT /segment="DNA-A"
FT /host="Abelmoschus esculentus (okra)"
FT /isolate="OY124"
FT /mol_type="genomic DNA"
FT /country="India:Jalgov, Maharashtra"
FT /isolation_source="leaf"
FT /collected_by="V.Venkataravanappa"
FT /collection_date="2006"
FT /db_xref="taxon:908036"
FT gene 121. .486
FT /gene="AV2"
FT CDS 121. .486
FT /codon_start=1
FT /gene="AV2"
FT /product="precoat protein"
FT /db_xref="GOA:E7BP36"
FT /db_xref="InterPro:IPR002511"
FT /db_xref="InterPro:IPR005159"
FT /db_xref="UniProtKB/TrEMBL:E7BP36"
FT /protein_id="ADO40710.1"
FT /translation="MWDPLLNEFPDTVHGFRCMLSVKYLQLLSQDYSPDTLGYDLIRDL
FT ICILRSRNYVEASCRYRHFYARVESTSASELRQPIHQPCCCAHCPRHKTTGMDKQAYEQ
FT EAQNVSDVQKSGCSKGL"
FT gene 281. .1051
FT /gene="AV1"
FT CDS 281. .1051
FT /codon_start=1
FT /gene="AV1"
FT /product="coat protein"
FT /db_xref="GOA:E7BP37"
FT /db_xref="InterPro:IPR000263"
FT /db_xref="InterPro:IPR000650"
FT /db_xref="UniProtKB/TrEMBL:E7BP37"
FT /protein_id="ADO40711.1"
FT /translation="MSKRAADIVISTPASKVRRRLNFGSPYTSRVAAPIVRVTKQQAWT
FT NRLMNRKPRMYRMYRSPDVPRGCEGPCKVQSFESRHDVVHIGKVMCISDVTRGVGLTHR
FT IGKRFCVKSVYVLGKIWMDENIKTKNHTNSVMFFLVRDRRPVDKPQDFGEVFNMFDNEP
FT STATVKNSHRDRYQVLRKWHATVTGGQYASKEQALVKKFVKVNNYVVYNQQEAGKYENH
FT TENALMLYMACTHASNPVYATLKIRIYFYDSVTN"
FT gene complement(629. .985)
FT /gene="AC5"
FT CDS complement(629. .985)
FT /codon_start=1
FT /gene="AC5"
FT /product="AC5 protein"
FT /db_xref="InterPro:IPR006892"
FT /db_xref="UniProtKB/TrEMBL:E7BP38"
FT /protein_id="ADO40712.1"
FT /translation="MGTSHIKHQRILRMILVFSCFLLIVNNIIVNLDKLLDQRLFLTRI
FT LTTRDGCMPFPQHLVTIPMTILHGSRTGFVVKHVKYLTKILGFIYRSSITNKEKHHRIR
FT MVLGLDVLVHPYLT"
FT gene complement(1054. .1458)
FT /gene="AC3"
FT CDS complement(1054. .1458)
FT /codon_start=1
FT /gene="AC3"
FT /product="replication enhancer protein"
FT /db_xref="GOA:E7BP39"
FT /db_xref="InterPro:IPR000657"
FT /db_xref="UniProtKB/TrEMBL:E7BP39"
FT /protein_id="ADO40713.1"
FT /translation="MDSRTGARITAAQAKNGVYIWKVPNPLYFKILNHDHRPFTTNMDI
FT ITLRIHFNYNLRKALGIHKCFLTFRIWTTLHPQTGLFLRVFKTQVLKYLNNLGVVSINL
FT VIKAVEHVLYNVINQTMYVDQYSDIKFNLY"
FT gene complement(1151. .1603)
FT /gene="AC2"
FT CDS complement(1151. .1603)
FT /codon_start=1
FT /gene="AC2"
FT /product="transcription activator protein"
FT /db_xref="GOA:E7BP40"
FT /db_xref="InterPro:IPR000942"
FT /db_xref="UniProtKB/TrEMBL:E7BP40"
FT /protein_id="ADO40714.1"
FT /translation="MQHSSFSPNRCTRVPIKVQHREAKRRIRRRRVDLECGCSYYLSIN
FT CHNHGFSHRGTHHCSSSKEWRLYLEGSKSPLFQDPQPRPPSIHDEHGHNNTQDPFQLQP
FT TESSGNTQVFSNLPNLDDLTPSDWSFLKGIQNPSPQISQQSRCSFN"
FT gene complement(1500. .2588)
FT /gene="AC1"
FT CDS complement(1500. .2588)
FT /codon_start=1
FT /gene="AC1"
FT /product="replicase"
FT /db_xref="GOA:E7BP41"
FT /db_xref="InterPro:IPR001191"
FT /db_xref="InterPro:IPR001301"
FT /db_xref="InterPro:IPR022690"
FT /db_xref="InterPro:IPR022692"
FT /db_xref="UniProtKB/TrEMBL:E7BP41"
FT /protein_id="ADO40715.1"
FT /translation="MPSKRFQIYSKNYFLTYPKCSLTKEEALSQIQNLHTPVNKKFIRI
FT CRELHEDGNPHLHVLIQFEGKFQCRNNRFFYLTSPTRSAHFHPNIQGAKSSSDVKTYME
FT KDGDILDHGVFQVDGRSARGGCQTANDAYAEAINAGSKAQALNILKEKAPRDFLLQFHN
FT LNSNLDRYFQEPPAPYVSPFSSSSFDQVPEELEEWACENVVDAAARPLRPQSIVIEEDS
FT RTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHFLKHFKEFMGAQRDWQ
FT SNTKYGKPVQIKGGIPTIFLCNPGPNASYKEFLDEEKNSALKAWALKNAAFVFLTEPLY
FT SGTNQSTAQGSEETHQEEESRS"
FT gene complement(2141. .2434)
FT /gene="AC4"
FT CDS complement(2141. .2434)
FT /codon_start=1
FT /gene="AC4"
FT /product="AC4 protein"
FT /db_xref="InterPro:IPR002488"
FT /db_xref="UniProtKB/TrEMBL:E7BP42"
FT /protein_id="ADO40716.1"
FT /translation="MGILTCMFSSSSKESSSAGTIDSSTSPPQLGQHISIRTFRELKAQ
FT AMSKPTWRKTETSLIMEFSKSMEDQLEEVAKLPTTHMPRQSTQGPKLRPSIY"
XX
SQ Sequence 2743 BP; 728 A; 530 C; 651 G; 834 T; 0 other;
gu112033 Length: 2743 20-MAY-2012 Type: N Check: 3715 ..
1 accggatggc cgcgcgattt tttaaagtgg tgggtccaga acgcacgacg
51 atgcagactc aaagcttaga taacgctcct tcggctataa gtacttgcgc
101 actaagtttc aattcaaaaa atgtgggatc cactattaaa cgaatttccg
151 gatacggttc acgggtttcg ttgtatgcta tctgtaaaat atttgcaact
201 tttgtcgcag gattattctc cagatacgct tgggtacgat ttaatacggg
251 atttaatttg tattttacgc tcccgtaatt atgtcgaagc gagctgccga
301 tatcgtcatt tctacgcccg cgtcgaaagt acgtcggcgt ctgaacttcg
351 gcagcccata caccagccgt gttgctgcgc ccattgtccg cgtcacaaaa
401 caacaggcat ggacaaacag gcttatgaac aggaagccca gaatgtatcg
451 gatgtacaga agtccggatg ttccaagggg ttgtgagggt ccctgtaagg
501 tacaatcctt tgagtctaga cacgatgttg ttcatattgg taaggtaatg
551 tgtatttctg atgttacgcg tggagtcggt ttgacccacc gtataggtaa
601 gcgtttctgt gtcaagtcag tttatgtttt aggtaagata tggatggacg
651 agaacatcaa gaccaagaac catacgaatt cggtgatgtt tttccttgtt
701 cgtgatcgac gaccggtaga taaaccccag gattttggtg aggtatttaa
751 catgtttgac aacgaaccca gtacggctac cgtgaagaat agtcataggg
801 atcgttacca ggtgttgagg aaatggcatg caaccgtcac gggtggtcaa
851 tatgcgagta aggaacaggc gttggtcaag aagtttgtca aggttaacaa
901 ttatgttgtt tacaatcaac aggaagcagg aaaatacgag aatcatacgg
951 agaatgcgtt gatgctttat atggcttgta cccatgctag taacccagtg
1001 tatgctacgc ttaagattcg tatttatttt tatgactctg taacgaattg
1051 aaattaataa agattgaatt ttatatctga atattggtct acatacattg
1101 tttgattaat tacattgtac aaaacatgtt cgacagcttt aataactaaa
1151 ttaattgaaa ctacacctag attgttgaga tatttgagga cttgggtttt
1201 gaataccctt aagaaaagac cagtctgagg gtgtaaggtc gtccagattc
1251 ggaaggttag aaaacacttg tgtattccca gagctttccg taggttgtag
1301 ttgaaatgga tcctgagtgt tattatgtcc atgttcgtcg tgaatggacg
1351 gtggtcgtgg ttgaggatct tgaaatagag gggatttgga accttccaga
1401 tatagacgcc attctttgct tgagctgcag tgatgcgtgc ccctgtgcga
1451 gaatccatgg ttgtggcagt tgatagagag ataataagaa cacccgcatt
1501 caagatctac tctcctcctc ctgatgcgtc tcttcgcttc cctgtgctgt
1551 actttgattg gtacccgagt acaacggttc ggtgagaaag acgaatgctg
1601 cattttttaa agcccacgct ttcaaagctg agttcttttc ctcgtccaag
1651 aattctttat agcttgcgtt ggggcctgga ttgcagagga agattgttgg
1701 aatgccgcct ttaatttgaa ctggcttccc gtactttgtg tttgattgcc
1751 agtccctttg ggcccccatg aattctttaa agtgttttag gaagtgtgga
1801 tcgacgtcat caatgacgtt ataccaagcg tcgttactgt acacctttgg
1851 gctaaggtcc agatgcccgc ataaatagtt atgtgggcct aaagacctag
1901 cccacattgt ttttccagta cgactatctt cctcaattac tatactttga
1951 ggtctcaggg gccgcgcagc ggcatcgaca acgttctcgc acgcccactc
2001 ttcaagttct tctggaactt gatcaaatga agaagaagaa aaaggagaaa
2051 cataaggagc tggaggctcc tgaaaatatc tatctaaatt agaatttaaa
2101 ttatgaaatt gaagtagaaa gtctcttggg gctttctcct tcagtatatt
2151 gagggcctga gctttggacc ctgcgttgat tgcctcggca tatgcgtcgt
2201 tggcagtttg gcaacctcct ctagctgatc ttccatcgac ttggaaaact
2251 ccatgatcaa ggatgtctcc gtctttctcc atgtaggttt tgacatcgct
2301 tgagctttta gctccctgaa tgttcggatg gaaatgtgct gacctagttg
2351 gggaggtgag gtagaagaat ctattgttcc tgcactggaa ctttccttcg
2401 aactggatga gaacatgcaa gtgaggattc ccatcttcat gaagttctct
2451 gcagattcta atgaattttt tgtttactgg ggtgtgtagg ttttgtattt
2501 gggaaagtgc ttcctctttg gtaagagagc atttgggata agtaaggaaa
2551 taatttttgg aatatatttg aaagcgttta gaaggcatgt tgactaaaat
2601 tgagtaccga ttgactcgct ttggcaactc tctctggtat atcggtaccc
2651 aatatatagt gagtaccaaa tggcataatt gtaattattg caactgaaat
2701 tcaaaatcct cacgctccaa aaagcggcca tccgtataat att