Sequence of DPV Bhendi yellow vein mosaic virus
Bhendi yellow vein India virus [India:Hyderabad:OY65:2005] segment DNA-A, complete sequence.
ACC No: GU112035
Dated: 2012-05-20 | Length: 2740 | CRC: -2013161946
ID GU112035; SV 1; circular; genomic DNA; STD; VRL; 2740 BP.
XX
AC GU112035;
XX
DT 02-JAN-2011 (Rel. 107, Created)
DT 20-MAY-2012 (Rel. 112, Last updated, Version 2)
XX
DE Bhendi yellow vein India virus [India:Hyderabad:OY65:2005] segment DNA-A,
DE complete sequence.
XX
KW .
XX
OS Bhendi yellow vein India virus [India:Hyderabad:OY65:2005]
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus;
OC unclassified Begomovirus.
XX
RN [1]
RP 1-2740
RX PUBMED; 22447131.
RA Venkataravanappa V., Lakshminarayana Reddy C.N., Jalali S.,
RA Krishna Reddy M.;
RT "Molecular characterization of distinct bipartite begomovirus infecting
RT bhendi (Abelmoschus esculentus L.) in India";
RL Virus Genes 44(3):522-535(2012).
XX
RN [2]
RP 1-2740
RA Venkataravanappa V., Lakshiminarayanareddy C.N., Devaraju, Swaranalatha P.,
RA Jalali S., Krishnareddy M.;
RT "Molecular genetic diversity of begomoviruses infecting okra in India";
RL Unpublished.
XX
RN [3]
RP 1-2740
RA Venkataravanappa V., Lakshiminarayanareddy C.N., Devaraju, Swaranalatha P.,
RA Jalali S., Krishnareddy M.;
RT ;
RL Submitted (30-SEP-2009) to the INSDC.
RL Division of Plant Pathology, Indian Institute of Horticultural Research,
RL Hessaraghatta Lake PO, Bangalore, Karnataka 560089, India
XX
FH Key Location/Qualifiers
FH
FT source 1. .2740
FT /organism="Bhendi yellow vein India virus
FT [India:Hyderabad:OY65:2005]"
FT /segment="DNA-A"
FT /host="Abelmoschus esculentus (okra)"
FT /isolate="OY65"
FT /mol_type="genomic DNA"
FT /country="India:Hyderabad, Andhra Pradesh"
FT /isolation_source="leaf"
FT /collected_by="V.Venkataravanappa"
FT /collection_date="2005"
FT /db_xref="taxon:908032"
FT gene 121. .486
FT /gene="AV2"
FT CDS 121. .486
FT /codon_start=1
FT /gene="AV2"
FT /product="precoat protein"
FT /db_xref="GOA:E7BP50"
FT /db_xref="InterPro:IPR002511"
FT /db_xref="InterPro:IPR005159"
FT /db_xref="UniProtKB/TrEMBL:E7BP50"
FT /protein_id="ADO40724.1"
FT /translation="MWDPLLSEFPDTVHGFRCMLSVKYLQLLSQDYSPDTLGYELIRDI
FT ICILRSRNYVEASCRYRHFYARVESTPASELRQPLHQPCCCPHCPRHKATGMDKQAYEQ
FT ETQNVPDVQKSGCPKGM"
FT gene 281. .1051
FT /gene="AV1"
FT CDS 281. .1051
FT /codon_start=1
FT /gene="AV1"
FT /product="coat protein"
FT /db_xref="GOA:E7BP51"
FT /db_xref="InterPro:IPR000263"
FT /db_xref="InterPro:IPR000650"
FT /db_xref="UniProtKB/TrEMBL:E7BP51"
FT /protein_id="ADO40725.1"
FT /translation="MSKRAADIVISTPASKVRRRLNFDSPYTSRAAAPIVRVTKQQAWT
FT NRPMNRKPRMYRMYRSPDVPRGCEGPCKVQSFESRHDIVHIGKVMCISDVTRGVGLTHR
FT IGKRFCVKSVYVLGKIWMDENIKTKNHTNSVMFFLVRDRRPTDKPQDFGEVFNMFDNEP
FT STATVKNMHRDRYQVLRKWHATVTGGQCASTEQALVKKFVRLYNYVVYNQQEAGKYENH
FT TENALMLYMACTHASNPVYATLKIRIYFYDSVTN"
FT gene complement(629. .985)
FT /gene="AC5"
FT CDS complement(629. .985)
FT /codon_start=1
FT /gene="AC5"
FT /product="AC5 protein"
FT /db_xref="InterPro:IPR006892"
FT /db_xref="UniProtKB/TrEMBL:E7BP52"
FT /protein_id="ADO40726.1"
FT /translation="MGTSHIKHQRILRMILVFSCLLLVVNNIIVKPNKFLNQRLFRTRT
FT LSTSNGCMPFPQHLVPIPMHVLHGRRTGLVIKHIKYFTKILWFICRSSITNKEKHHRIR
FT MVLGLDVLVHPYLT"
FT gene complement(1054. .1458)
FT /gene="AC3"
FT CDS complement(1054. .1458)
FT /codon_start=1
FT /gene="AC3"
FT /product="replication enhancer protein"
FT /db_xref="GOA:E7BP53"
FT /db_xref="InterPro:IPR000657"
FT /db_xref="UniProtKB/TrEMBL:E7BP53"
FT /protein_id="ADO40727.1"
FT /translation="MDSRTGARITAAQAKNGVYIWKVPNPLYFKILNHDNRPFTTNMDI
FT ITLRIHFNYNLRKALGVHKCFLTFRIWTTLHPQTGLFLRVFKTQVLKYLNNLGVVSINL
FT VIKAVEHVLYNVINQTMYVDQYSDIKFNLY"
FT gene complement(1151. .1603)
FT /gene="AC2"
FT CDS complement(1151. .1603)
FT /codon_start=1
FT /gene="AC2"
FT /product="transcription activator protein"
FT /db_xref="GOA:E7BP54"
FT /db_xref="InterPro:IPR000942"
FT /db_xref="UniProtKB/TrEMBL:E7BP54"
FT /protein_id="ADO40728.1"
FT /translation="MQHSSFSPNRCTRVPIKVQHREAKRAHRRRRVDLECGCSYYLSIN
FT CHNHGFSHRGTHHCSSSKEWRLYLEGSKSPLFQDPQPRQPSIHDEHGHNNTQDPFQLQP
FT TESSGSTQVFSNLPNLDDLTPSDWSFLKGIQNPSPQISQQSRCSFN"
FT gene complement(1500. .2588)
FT /gene="AC1"
FT CDS complement(1500. .2588)
FT /codon_start=1
FT /gene="AC1"
FT /product="replicase"
FT /db_xref="GOA:E7BP55"
FT /db_xref="InterPro:IPR001191"
FT /db_xref="InterPro:IPR001301"
FT /db_xref="InterPro:IPR022690"
FT /db_xref="InterPro:IPR022692"
FT /db_xref="UniProtKB/TrEMBL:E7BP55"
FT /protein_id="ADO40729.1"
FT /translation="MPSKRFKIYSKNYFLTYPKCSLTKEEALSQFLNLQTPVNKKFIRI
FT CRELHEDGNPHLHVLIQFEGKFQCRNNRFFDLTSPTRSAHFHPNIQGAKSSSDVKTYME
FT KDGDILDHGVFQVDGRSARGGCQTANDAYAEAINAGSKAQALNILKEKAPRDFLLQFHN
FT LNSNLDRYFQEPPAPYVSPFSSSSFDQVPEELEEWACENVVDAAARPLRPQSIVIEGDS
FT RTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHFLKHFKEFMGAQRDWQ
FT SNTTYGKPVQIRRGIPALFLCDLCLWFYILQFLDEEKKHCLNTWALKNAAFVFLTEPLY
FT SGTNQSTAQGSEESAQEEESRS"
FT gene complement(2141. .2434)
FT /gene="AC4"
FT CDS complement(2141. .2434)
FT /codon_start=1
FT /gene="AC4"
FT /product="AC4 protein"
FT /db_xref="InterPro:IPR002488"
FT /db_xref="UniProtKB/TrEMBL:E7BP56"
FT /protein_id="ADO40730.1"
FT /translation="MGILTCMFSSSSKESSSAGTIDSSTSPPQLGQHISIRTFRELKAQ
FT AMSKPTWRKTETSLIMEFSKSMEDQLEEVAKLPTTHMPRQSTQGPKLRPSIY"
XX
SQ Sequence 2740 BP; 731 A; 543 C; 654 G; 812 T; 0 other;
gu112035 Length: 2740 20-MAY-2012 Type: N Check: 1036 ..
1 accggatggc cgcgcgattc ttttaagtgg tgagtccaga acgcacgacg
51 atgctgtctc atagcttaga taacgctcct tcggctataa gtacttgcgc
101 gctaagttta aattcaaaca atgtgggatc cactattgag cgaattcccg
151 gatacggttc acgggtttcg ttgtatgcta tctgtcaaat atttgcaact
201 tttgtcgcag gattattctc cagataccct tgggtacgag ttaatacggg
251 atataatttg tattttacgc tcccgtaatt atgtcgaagc gagctgccga
301 tatcgtcatt tctacgcccg cgtcgaaagt acgccggcgt ctgaacttcg
351 acagccctta caccagccgt gctgctgccc ccattgtccg cgtcacaaag
401 caacaggcat ggacaaacag gcctatgaac aggaaaccca gaatgtaccg
451 gatgtacaga agtccggatg tcccaagggg atgtgagggt ccctgtaagg
501 tacagtcgtt tgaatctcga cacgatatcg ttcatattgg taaggtaatg
551 tgtatttcgg atgttacgcg tggagtcggt ttgacccatc gtataggtaa
601 gcgtttttgt gtcaagtcag tttatgtttt aggtaagata tggatggacg
651 agaacatcaa gaccaagaac catacgaatt cggtgatgtt tttccttgtt
701 cgtgatcgac gaccgacaga taaaccacaa gattttggtg aagtatttaa
751 tatgtttgat aacgagccca gtacggcgac cgtgaagaac atgcataggg
801 atcggtacca ggtgttgagg aaatggcatg caaccgttac tggtggacaa
851 tgtgcgagta cggaacaggc gttggttaag aaatttgtta ggctttacaa
901 ttatgttgtt tacaaccagc aggaggcagg aaaatacgag aatcatacgg
951 agaatgcgtt gatgctttat atggcttgta cccatgctag caacccagtt
1001 tatgctacgc tgaagattag gatatatttt tatgactctg taacgaattg
1051 aaattaataa agattgaatt ttatatctga atattggtct acatacattg
1101 tttgattaat tacattgtac aaaacatgtt cgacagcttt aataactaaa
1151 ttaattgaaa ctacaccgag attgttgaga tatttgagga cttgggtttt
1201 gaataccctt aagaaaagac cagtctgagg gtgtaaggtc gtccagattc
1251 ggaaggttag aaaacacttg tgtactccca gagctttccg taggttgtag
1301 ttgaaatgga tcctgagtgt tattatgtcc atgttcgtcg tgaatggacg
1351 gttgtcgtgg ttgaggatct tgaaatagag gggatttgga accttccaga
1401 tatagacgcc attctttgct tgagctgcag tgatgcgtgc ccctgtgcga
1451 gaatccatgg ttgtggcagt tgatagagag ataataagaa cacccgcatt
1501 caagatctac tctcctcctc ctgtgcgctc tcttcgcttc cctgtgctgt
1551 actttgattg gtacccgagt acaacggttc ggtgagaaag acgaatgctg
1601 cattttttaa agcccacgta ttcaaacagt gtttcttttc ctcgtctaag
1651 aattgcagga tataaaacca aaggcaaaga tcgcagagga agagagccgg
1701 aattccgcgt ctaatttgaa ccggcttccc gtatgtggtg ttagattgcc
1751 agtccctttg ggcccccatg aattctttaa agtgttttag gaagtgtgga
1801 tcgacgtcat caatgacgtt ataccaagcg tcgttactgt acacctttgg
1851 gctaaggtcc agatgcccgc ataaatagtt atgtgggcct aaagacctag
1901 cccacattgt ttttccagta cgactatctc cctcaattac tatactttga
1951 ggtctcaggg gccgcgcagc ggcatcgaca acgttctcgc acgcccactc
2001 ttcaagttct tctggaactt gatcaaatga agaagaagaa aaaggagaaa
2051 cataaggagc tggaggctcc tgaaaatatc tatctaaatt agaatttaaa
2101 ttatgaaatt gaagtagaaa gtctcttggg gctttctcct tcagtatatt
2151 gagggcctga gctttggacc ctgcgttgat tgcctcggca tatgcgtcgt
2201 tggcagtttg gcaacctcct ctagctgatc ttccatcgac ttggaaaact
2251 ccatgatcaa ggatgtctcc gtctttctcc atgtaggttt tgacatcgct
2301 tgagctttta gctccctgaa tgttcggatg gaaatgtgct gacctagttg
2351 gggaggtgag gtcgaagaat ctattgttcc tgcactggaa ctttccttcg
2401 aactggatga gaacatgcaa gtgaggattc ccatcttcat gaagttctct
2451 gcagattcta atgaattttt tgtttactgg ggtttggaga tttaagaatt
2501 gggaaagtgc ttcttcttta gtcagagagc atttgggata agtgaggaaa
2551 taatttttgg aatatatttt aaagcgttta gaaggcatgt tggctaacat
2601 tgactaccga ttgactcgct ctggcaactc tctctggtgt atcggaaccc
2651 aatatatagg gagacccaaa tggcatatgt gtaattttgt aatgtaattt
2701 ttaatcctca cgctccaaaa gcggccatcc gtataatatt