Sequence of DPV Bhendi yellow vein mosaic virus
Bhendi yellow vein India virus [India:Varapamatti:OY171A:2006] segment DNA-A, complete sequence.
ACC No: GU112043
Dated: 2012-05-20 | Length: 2744 | CRC: -958382789
ID GU112043; SV 1; circular; genomic DNA; STD; VRL; 2744 BP.
XX
AC GU112043;
XX
DT 02-JAN-2011 (Rel. 107, Created)
DT 20-MAY-2012 (Rel. 112, Last updated, Version 2)
XX
DE Bhendi yellow vein India virus [India:Varapamatti:OY171A:2006] segment
DE DNA-A, complete sequence.
XX
KW .
XX
OS Bhendi yellow vein India virus [India:Varapamatti:OY171A:2006]
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus;
OC unclassified Begomovirus.
XX
RN [1]
RP 1-2744
RX PUBMED; 22447131.
RA Venkataravanappa V., Lakshminarayana Reddy C.N., Jalali S.,
RA Krishna Reddy M.;
RT "Molecular characterization of distinct bipartite begomovirus infecting
RT bhendi (Abelmoschus esculentus L.) in India";
RL Virus Genes 44(3):522-535(2012).
XX
RN [2]
RP 1-2744
RA Venkataravanappa V., Lakshiminarayanareddy C.N., Devaraju, Swaranalatha P.,
RA Jalali S., Krishnareddy M.;
RT "Molecular genetic diversity of begomoviruses infecting okra in India";
RL Unpublished.
XX
RN [3]
RP 1-2744
RA Venkataravanappa V., Lakshiminarayanareddy C.N., Devaraju, Swaranalatha P.,
RA Jalali S., Krishnareddy M.;
RT ;
RL Submitted (30-SEP-2009) to the INSDC.
RL Division of Plant Pathology, Indian Institute of Horticultural Research,
RL Hessaraghatta Lake PO, Bangalore, Karnataka 560089, India
XX
FH Key Location/Qualifiers
FH
FT source 1. .2744
FT /organism="Bhendi yellow vein India virus
FT [India:Varapamatti:OY171A:2006]"
FT /segment="DNA-A"
FT /host="Abelmoschus esculentus (okra)"
FT /isolate="OY171A"
FT /mol_type="genomic DNA"
FT /country="India:Varapamatti, Tamil Nadu"
FT /isolation_source="leaf"
FT /collected_by="V.Venkataravanappa"
FT /collection_date="2006"
FT /db_xref="taxon:908068"
FT gene 121. .486
FT /gene="AV2"
FT CDS 121. .486
FT /codon_start=1
FT /gene="AV2"
FT /product="precoat protein"
FT /db_xref="GOA:E7BPA6"
FT /db_xref="InterPro:IPR002511"
FT /db_xref="InterPro:IPR005159"
FT /db_xref="UniProtKB/TrEMBL:E7BPA6"
FT /protein_id="ADO40780.1"
FT /translation="MWDPLLNEFPDTVHGFRCMLSVKYSQLRSQEYSPDTLGYDLIRDL
FT ICIARSRNYVEASCRSRHFYARVESTPASELRQPIHQPCCCSHCPRHKTTGMDKQAYEQ
FT ETQNVPDVQKSGCSKGM"
FT gene 281. .1051
FT /gene="AV1"
FT CDS 281. .1051
FT /codon_start=1
FT /gene="AV1"
FT /product="coat protein"
FT /db_xref="GOA:E7BPA7"
FT /db_xref="InterPro:IPR000263"
FT /db_xref="InterPro:IPR000650"
FT /db_xref="UniProtKB/TrEMBL:E7BPA7"
FT /protein_id="ADO40781.1"
FT /translation="MSKRAADLVISTPASKVRRRLNFGSPYTSRAAAPIVRVTKQQAWT
FT NRPMNRKPRMYRMYRSPDVPRGCEGPCKVQSFESRHDVVHIGKVMCISDVTRGVGLTHR
FT IGKRFCVKSVYVLGKIWMDENIKTKNHTNSVMFFLVRDRRPTDKPQDFGEVFNMFDNEP
FT SMATVKNVHRDRYQVLRKWHATVTGGQYASKEQALVKKFVRVNNYVVYNQQEAGKYENH
FT TENALMLYMACTHASNPVYATLKIRIYFYDSVTN"
FT gene complement(629. .985)
FT /gene="AC5"
FT CDS complement(629. .985)
FT /codon_start=1
FT /gene="AC5"
FT /product="AC5 protein"
FT /db_xref="InterPro:IPR006892"
FT /db_xref="UniProtKB/TrEMBL:E7BPA8"
FT /protein_id="ADO40782.1"
FT /translation="MGTSHIKHQRILRMILVFSCLLLVVNNIIVNPNKFLNQRLFLTRI
FT LSTSNGCMPFPQHLVPIPMHVLHGRHTGLVIKHIKYFTKILWFICRSSITNKEKHHRIR
FT MVLGLDVLVHPYLT"
FT gene complement(1054. .1458)
FT /gene="AC3"
FT CDS complement(1054. .1458)
FT /codon_start=1
FT /gene="AC3"
FT /product="replication enhancer protein"
FT /db_xref="GOA:E7BPA9"
FT /db_xref="InterPro:IPR000657"
FT /db_xref="UniProtKB/TrEMBL:E7BPA9"
FT /protein_id="ADO40783.1"
FT /translation="MDSRTGERITAAQAKNGVYIWKVPNPLYFKILNHDNRPFTTNMDI
FT ITLRIHFNYNLRKALGIHKCFLTFRIWTTLHPPTGLFLRVFKTQVLKYLNNLGVVPINL
FT VIKAVEHVLYNVTHQPMYVDQYSDKKFDPY"
FT gene complement(1151. .1603)
FT /gene="AC2"
FT CDS complement(1151. .1603)
FT /codon_start=1
FT /gene="AC2"
FT /product="transcription activator protein"
FT /db_xref="GOA:E7BPB0"
FT /db_xref="InterPro:IPR000942"
FT /db_xref="UniProtKB/TrEMBL:E7BPB0"
FT /protein_id="ADO40784.1"
FT /translation="MQHSSFSPNRCTRVPIKVQHREAKRRIRRRRVDLECGCSYYLSIN
FT CHNHGFSHRGTHHCSSSKEWRLYLEGSKSPLFQDPQPRQPSIHDEHGHNNTQDPFQLQP
FT TESSGNTQVFSNLPNLDDLTPSNWSFLKGIQNPSPQISQQSRCSSN"
FT gene complement(1500. .2591)
FT /gene="AC1"
FT CDS complement(1500. .2591)
FT /codon_start=1
FT /gene="AC1"
FT /product="replicase"
FT /db_xref="GOA:E7BPB1"
FT /db_xref="InterPro:IPR001191"
FT /db_xref="InterPro:IPR001301"
FT /db_xref="InterPro:IPR022690"
FT /db_xref="InterPro:IPR022692"
FT /db_xref="UniProtKB/TrEMBL:E7BPB1"
FT /protein_id="ADO40785.1"
FT /translation="MAAPNRFKINAKNYFLTYPKCSLTKEEALSQFLNLQTPVNKKFIR
FT ICRELHEDGNPHLHVLIQFEGKFQCRNNRFFDLTSPTRSAHFHPNIQGAKSSSDVKTYM
FT EKDGDILDHGVFKVDGRSARGGCQTANDAYAEAINAGSKAQALNILKEKAPRDFLLQFH
FT NLNSNLDRYFQEPPAPYVSPFSSSSFDQVPEELEEWACENVVDAAARPLRPQSIVIEED
FT SRTGKTMWARSLGPHNYLCGNLDLSPKVYSNDAWYNVIDDVDPHFLKHFKEFMGAQRDW
FT QSNTKYGKPVQIKGGIPTIFLCNPGPNASYKEFLDEEKNSALKAWALKNAAFVFLTEPL
FT YSGTNQSTAQGSEETHQEEESRS"
FT gene complement(2141. .2434)
FT /gene="AC4"
FT CDS complement(2141. .2434)
FT /codon_start=1
FT /gene="AC4"
FT /product="AC4 protein"
FT /db_xref="InterPro:IPR002488"
FT /db_xref="UniProtKB/TrEMBL:E7BPB2"
FT /protein_id="ADO40786.1"
FT /translation="MGILTCMFSSSSKESSSAETIDSSTSPPQLGQHISIRTFRELKAQ
FT AMSKPTWRKTETSLIMEFSKSMEDQLEEVAKLPTTHMPRQSTQGPKLRPSIY"
XX
SQ Sequence 2744 BP; 723 A; 529 C; 661 G; 831 T; 0 other;
gu112043 Length: 2744 20-MAY-2012 Type: N Check: 1479 ..
1 accggatggc cgcgcgattt ttttaagtgg tgggtccaga acgcacgacg
51 atgcagactc aaagcttaga taacgctcct tcgactataa gtacgtgcgc
101 actaagtttc aattcaaaaa atgtgggatc cactgttaaa cgagttccca
151 gatacggttc acggttttcg ttgtatgctt tctgtgaaat attcgcaact
201 tcggtcgcag gagtattcac cagatacgct tggttacgat ctaatacgag
251 atttaatttg tattgcacgc tctcgtaatt atgtcgaagc gagctgcaga
301 tctcgtcatt tctacgcccg cgtcgaaagt acgccggcgt ctgaacttcg
351 gcagcccata caccagccgt gctgctgctc ccattgtccg cgtcacaaaa
401 caacaggcat ggacaaacag gcctatgaac aggaaaccca gaatgtaccg
451 gatgtacaga agtccggatg ttccaagggg atgtgagggt ccctgtaagg
501 tacagtcgtt tgaatctcga cacgatgtcg ttcatattgg taaggtaatg
551 tgtatttcgg atgttacgcg tggagtcggt ttgacccatc gtataggtaa
601 gcgtttttgt gtcaagtcag tttatgtttt aggtaagata tggatggacg
651 agaacatcaa gaccaagaac catacgaatt cggtgatgtt tttccttgtt
701 cgtgatcgac gaccgacaga taaaccacaa gattttggtg aagtatttaa
751 tatgtttgat aacgagccca gtatggcgac cgtgaagaac gtgcataggg
801 atcggtacca ggtgttgagg aaatggcatg caaccgttac tggtggacaa
851 tatgcgagta aggaacaggc gttggttaag aaatttgtta gggttaacaa
901 ttatgttgtt tacaaccagc aggaggcagg aaaatacgag aatcatacgg
951 agaatgcgtt gatgctttat atggcttgta cccatgctag caatccagtt
1001 tatgctacgc tgaagattag gatatatttt tatgactctg taacgaattg
1051 aaattaataa ggatcgaatt ttttatctga atattggtct acatacattg
1101 gttgatgagt tacattgtac aatacatgtt cgacagcttt aataactaaa
1151 ttaattggaa ctacaccgag attgttgaga tatttgagga cttgggtttt
1201 gaataccctt aagaaaagac cagttggagg gtgtaaggtc gtccagattc
1251 ggaaggttag aaaacacttg tgtattccca gagctttccg taggttgtag
1301 ttgaaatgga tcctgagtgt tattatgtcc atgttcgtcg tgaatggacg
1351 gttgtcgtgg ttgaggatct tgaaatagag gggatttgga accttccaga
1401 tatagacgcc attctttgct tgagctgcag tgatgcgttc ccctgtgcga
1451 gaatccatgg ttgtggcagt tgatagagag ataataagaa cagccgcatt
1501 caagatctac tctcctcctc ctgatgcgtc tcttcgcttc cctgtgctgt
1551 actttgattg gtacccgagt acaacggttc ggtgagaaag acgaatgctg
1601 cattttttaa agcccacgct ttcaaagctg agttcttttc ctcgtccaag
1651 aattctttat agcttgcgtt gggccctgga ttgcagagga agattgttgg
1701 tatgccgcct ttaatttgaa ctggcttccc gtactttgtg tttgattgcc
1751 agtccctttg ggcccccatg aattctttaa agtgttttag gaagtgtgga
1801 tcgacgtcat caatgacgtt ataccaagcg tcgttactgt acacctttgg
1851 gctaaggtcc agattcccgc ataaatagtt atgtgggcct aaagacctag
1901 cccacattgt ttttccagta cgactatctt cctcaattac tatactttga
1951 ggtctcaggg gccgcgcagc ggcatcgaca acgttctcgc acgcccactc
2001 ttcaagttct tctggaactt gatcaaatga agaagaagaa aaaggagaaa
2051 cataaggagc tggaggctcc tgaaaatatc tatctaaatt agaatttaaa
2101 ttatgaaatt gaagtagaaa gtctcttggg gctttctcct tcagtatatt
2151 gagggcctga gctttggacc ctgcgttgat tgcctcggca tatgcgtcgt
2201 tggcagtttg gcaacctcct ctagctgatc ttccatcgac tttgaaaact
2251 ccatgatcaa ggatgtctcc gtctttctcc atgtaggttt tgacatcgct
2301 tgagctttta gctccctgaa tgttcggatg gaaatgtgct gacctagttg
2351 gggaggtgag gtcgaagaat ctattgtttc tgcactggaa ctttccttcg
2401 aactggatga gaacatgcaa gtgaggattc ccatcttcat gaagttctct
2451 gcagattcta atgaattttt tgtttactgg ggtttggaga tttaagaatt
2501 gggaaagtgc ttcttcttta gtcagggagc acttgggata agtgagaaaa
2551 taatttttgg catttatttt aaaccgattg ggtgctgcca tgttgactta
2601 gtcaatcggt gtctctcaac tctctctatg tatcggtgta ttggagtcct
2651 atatatatgg agactctaat ggcataaatg taaataaaag aactttaatt
2701 tgaaattcaa aggaaaaggc taaagcggcc atccgtctaa tatt