Sequence of DPV Bhendi yellow vein India virus
Bhendi yellow vein India virus [India:Trichy:OY115B:2005] segment DNA-A, complete sequence.
ACC No: GU112048
Dated: 2012-05-20 | Length: 2744 | CRC: -2093098738
ID GU112048; SV 1; circular; genomic DNA; STD; VRL; 2744 BP.
XX
AC GU112048;
XX
DT 02-JAN-2011 (Rel. 107, Created)
DT 20-MAY-2012 (Rel. 112, Last updated, Version 2)
XX
DE Bhendi yellow vein India virus [India:Trichy:OY115B:2005] segment DNA-A,
DE complete sequence.
XX
KW .
XX
OS Bhendi yellow vein India virus [India:Trichy:OY115B:2005]
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus;
OC unclassified Begomovirus.
XX
RN [1]
RP 1-2744
RX PUBMED; 22447131.
RA Venkataravanappa V., Lakshminarayana Reddy C.N., Jalali S.,
RA Krishna Reddy M.;
RT "Molecular characterization of distinct bipartite begomovirus infecting
RT bhendi (Abelmoschus esculentus L.) in India";
RL Virus Genes 44(3):522-535(2012).
XX
RN [2]
RP 1-2744
RA Venkataravanappa V., Lakshiminarayanareddy C.N., Devaraju, Swaranalatha P.,
RA Jalali S., Krishnareddy M.;
RT "Molecular genetic diversity of begomoviruses infecting okra in India";
RL Unpublished.
XX
RN [3]
RP 1-2744
RA Venkataravanappa V., Lakshiminarayanareddy C.N., Devaraju, Swaranalatha P.,
RA Jalali S., Krishnareddy M.;
RT ;
RL Submitted (30-SEP-2009) to the INSDC.
RL Division of Plant Pathology, Indian Institute of Horticultural Research,
RL Hessaraghatta Lake PO, Bangalore, Karnataka 560089, India
XX
FH Key Location/Qualifiers
FH
FT source 1. .2744
FT /organism="Bhendi yellow vein India virus
FT [India:Trichy:OY115B:2005]"
FT /segment="DNA-A"
FT /host="Abelmoschus esculentus (okra)"
FT /isolate="OY115B"
FT /mol_type="genomic DNA"
FT /country="India:Trichy, Tamil Nadu"
FT /isolation_source="leaf"
FT /collected_by="V.Venkataravanappa"
FT /collection_date="2005"
FT /db_xref="taxon:908063"
FT gene 121. .486
FT /gene="AV2"
FT CDS 121. .486
FT /codon_start=1
FT /gene="AV2"
FT /product="precoat protein"
FT /db_xref="GOA:E7BPE1"
FT /db_xref="InterPro:IPR002511"
FT /db_xref="InterPro:IPR005159"
FT /db_xref="UniProtKB/TrEMBL:E7BPE1"
FT /protein_id="ADO40815.1"
FT /translation="MWDPLLNEFPDTVHGFRCMLSVKYLQLLSQEYSPDTLGYDLIRDL
FT ICIVRSRNYVEASCRYRHFYARVESTPASELRQPLHQSCCCPHCPRHKTTGMDKQAYEQ
FT ETQNVPDVQKSGCSKGM"
FT gene 281. .1051
FT /gene="AV1"
FT CDS 281. .1051
FT /codon_start=1
FT /gene="AV1"
FT /product="coat protein"
FT /db_xref="GOA:E7BPE2"
FT /db_xref="InterPro:IPR000263"
FT /db_xref="InterPro:IPR000650"
FT /db_xref="UniProtKB/TrEMBL:E7BPE2"
FT /protein_id="ADO40816.1"
FT /translation="MSKRAADIVISTPASKVRRRLNFGSPYTSRAAAPIVRVTKQQAWT
FT NRPMNRKPRMYRMYRSPDVPRGCEGPCKVQSFESRHDVVHIGKVMCISDVTRGVGLTHR
FT IGKRFCVKSVYVLGKIGRDENIKTKNHTNSVMFFLVRDRQPTDKPQNFGEVFNMFDNEP
FT ITATVKNMHRDRYQGLRKWLATVTGGQNASKEKALVKKFIRVNNYVVYNHQEAGKYENH
FT TENALMLYMACTHANNPVYATLKIRIYFYDSVTN"
FT gene complement(629. .985)
FT /gene="AC5"
FT CDS complement(629. .985)
FT /codon_start=1
FT /gene="AC5"
FT /product="AC5 protein"
FT /db_xref="InterPro:IPR006892"
FT /db_xref="UniProtKB/TrEMBL:E7BPE3"
FT /protein_id="ADO40817.1"
FT /translation="MGTSHIKHQCILGVILVFSCLLVVVNNIIVYPDKLFNQRLFLTRI
FT LAPSNGCKPFPQPLVPIPMHVFNGGRNWLIIKHIKYFTKILWFICRLSITDKEKHHRIR
FT MVLGLDVLVPPNLT"
FT gene complement(1054. .1458)
FT /gene="AC3"
FT CDS complement(1054. .1458)
FT /codon_start=1
FT /gene="AC3"
FT /product="replication enhancer protein"
FT /db_xref="GOA:E7BPE4"
FT /db_xref="InterPro:IPR000657"
FT /db_xref="UniProtKB/TrEMBL:E7BPE4"
FT /protein_id="ADO40818.1"
FT /translation="MDSRTGARITAAQAKNGVYIWKVPNPLYFKILNHDNRPFTTNMDI
FT ITLRIQFNYNLRRALGVHKCFLTFRIWTTLHPPIGLFLRVFKTQVLKYFNNLGVISIKL
FT VIKAVGHGLYNVIYQTKYVGQLSDLKLKPY"
FT gene complement(1151. .1603)
FT /gene="AC2"
FT CDS complement(1151. .1603)
FT /codon_start=1
FT /gene="AC2"
FT /product="transcription activator protein"
FT /db_xref="GOA:E7BPE5"
FT /db_xref="InterPro:IPR000942"
FT /db_xref="UniProtKB/TrEMBL:E7BPE5"
FT /protein_id="ADO40819.1"
FT /translation="MQHSSFSPNRCTRVPIKIQHREAKRRIRRRRVDLECGCSYYLSIN
FT CHNHGFSHRGTHHCSSSKEWRLYLEGSKSPLFQDPQPRQPSIHDEHGHNNTQDPIQLQP
FT SESSGSAQVFSNLPNLDDLTPSDWSFLKGIQNPSPQVFQQFRCNLN"
FT gene complement(1500. .2591)
FT /gene="AC1"
FT CDS complement(1500. .2591)
FT /codon_start=1
FT /gene="AC1"
FT /product="replicase"
FT /db_xref="GOA:E7BPE6"
FT /db_xref="InterPro:IPR001191"
FT /db_xref="InterPro:IPR001301"
FT /db_xref="InterPro:IPR022690"
FT /db_xref="InterPro:IPR022692"
FT /db_xref="UniProtKB/TrEMBL:E7BPE6"
FT /protein_id="ADO40820.1"
FT /translation="MAAPNRFKINAKNYFLTYPKCSLTKEEALSLVLNLQTPIDEKFIK
FT ICRELHEDGNPHLHVLIQFEGKFQCKNNRFFDLTSPTRSAHFHPNIQGAKSSSDVKTYM
FT EKDGDILDHGVFQVDGRSARGGCQTANDAYAEAINAGSKAQALNILKEKAPRDFLLQFH
FT NLNSNLDRYFQEPPAPYVSPFSSSSFDQVPEELEEWACENVVDAAARPLIPQSIVIEGD
FT SPTGKTMRARSLGPHNDLCGPLELSPKVYSNDAWYNPLVDADPHFLKHFKEFMGVQRDW
FT QSNTKYGKPVQIKGGIPTIFLCNPGPNASYKEFLDEEKNSALKAWALKNAAFVFLTEPL
FT YSGTNQNTAQGSEETHQEEESRS"
FT gene complement(2141. .2434)
FT /gene="AC4"
FT CDS complement(2141. .2434)
FT /codon_start=1
FT /gene="AC4"
FT /product="AC4 protein"
FT /db_xref="InterPro:IPR002488"
FT /db_xref="UniProtKB/TrEMBL:E7BPE7"
FT /protein_id="ADO40821.1"
FT /translation="MGILTCMFSSSSKESSSAKTIDSSTSPPQLGQHISIRTFRELKAQ
FT AMSKPTWRKTETSLIMEFSKSMEDQLEEVAKLPTTHMPRQSTQGPKLRPSIY"
XX
SQ Sequence 2744 BP; 734 A; 538 C; 647 G; 825 T; 0 other;
gu112048 Length: 2744 20-MAY-2012 Type: N Check: 3633 ..
1 accggatggc cgcgcgattt ttttaagtgg tgggtccaga acgcacgacg
51 aagcagactc aaagcttaga taacgctcct tcgactataa gtacgtgcgc
101 actaagtttc aattcaaaaa atgtgggatc cactattaaa cgagttcccg
151 gatacggttc acggttttcg ttgtatgctt tctgtgaaat atttgcaact
201 tttgtcgcag gagtattcac cagatacgct tggttacgat ttaatacggg
251 atttaatttg tattgtccgt tctcgtaatt atgtcgaagc gagctgcaga
301 tatcgtcatt tctacgcccg cgtcgaaagt acgccggcgt ctgaacttcg
351 gcagccctta caccagtcgt gctgctgccc ccattgtccg cgtcacaaaa
401 caacaggcat ggacaaacag gcctatgaac aggaaaccca gaatgtaccg
451 gatgtacaga agtccggatg ttccaagggg atgtgagggt ccctgtaagg
501 tacagtcgtt tgaatctcga cacgatgttg tccatattgg taaggtaatg
551 tgtatttctg atgttacgcg tggagtcggt ttgacccatc gtataggtaa
601 gcgtttttgt gtcaagtcag tttatgtttt aggtaagatt gggagggacg
651 agaacatcaa gaccaagaac catacgaatt cggtgatgtt tttccttgtc
701 cgtgatcgac aaccgacaga taaaccacaa aattttggtg aagtatttaa
751 tatgtttgat aatgagccaa ttacggccac cgttaaaaac atgcataggg
801 atcggtacca ggggttgagg aaatggcttg caaccgttac tgggggccaa
851 aatgcgagta aggaaaaggc gttggttaaa aagtttatca gggtaaacaa
901 ttatgttgtt tacaaccacc aggaggcagg aaaatacgag aatcacaccg
951 agaatgcatt gatgctttat atggcttgta cccatgctaa taacccagtt
1001 tatgctaccc ttaaaattcg aatatatttt tatgactctg taacaaattg
1051 aaattaataa ggttttaatt ttaaatctga taattggcct acatactttg
1101 tttgataaat tacattgtac aaaccatgtc caacggcttt aataactaat
1151 ttaattgaga ttacacctaa attgttgaaa tacttgagga cttgggtttt
1201 gaataccctt aagaaaagac caatcggagg gtgtaaggtc gtccagattc
1251 ggaaggttag aaaacacttg tgcactccca gagctctccg aaggttgtag
1301 ttgaattgga tcctgagtgt tattatgtcc atgttcgtcg tgaatggacg
1351 gttgtcgtgg ttgaggatct tgaaatagag gggatttgga accttccaga
1401 tatagacgcc attctttgct tgagctgcag tgatgcgtgc ccctgtgcga
1451 gaatccatgg ttgtggcagt tgatagagag ataataagaa cacccgcatt
1501 caagatctac tctcctcctc ctgatgcgtc tcttcgcttc cctgtgctgt
1551 attttgattg gtacccgagt acaacggttc ggtgagaaag acgaatgctg
1601 cattttttaa agcccacgct ttcaaagctg agttcttttc ctcgtccaag
1651 aattctttat agcttgcgtt gggccctgga ttgcagagga agattgttgg
1701 tatgccgcct ttaatttgaa ctggcttccc gtactttgtg tttgattgcc
1751 agtccctttg gacccccatg aattctttaa agtgcttgag gaagtgcgga
1801 tcagcgtcaa ccagggggtt ataccaagcg tcgttactgt acacctttgg
1851 gctaagttcc agaggcccgc ataaatcgtt atgtgggcct aaagacctag
1901 cccgcattgt ttttccagtg gggctatctc cttcaattac tatactttga
1951 ggtatcaggg gccgcgcagc ggcatcgaca acgttctcgc acgcccactc
2001 ttcaagttct tctggaactt gatcaaatga agaagaagaa aaaggagaaa
2051 cataaggagc tggaggctcc tgaaaatatc tatctaaatt agaatttaaa
2101 ttatgaaatt gaagtagaaa gtctcttggg gctttctcct tcagtatatt
2151 gagggcctga gctttggacc ctgcgttgat tgcctcggca tatgcgtcgt
2201 tggcagtttg gcaacctcct ctagctgatc ttccatcgac ttggaaaact
2251 ccatgatcaa ggatgtctcc gtctttctcc atgtaggttt tgacatcgct
2301 tgagctttta gctccctgaa tgttcggatg gaaatgtgct gacctagttg
2351 gggaggtgag gtcgaagaat ctattgtttt tgcactggaa ctttccttcg
2401 aactggatga gaacatgcaa gtgaggattc ccatcttcat gaagttctct
2451 gcagatttta atgaattttt cgtctattgg ggtttggaga tttaagacta
2501 gggaaagtgc ttcttcttta gtcagagagc acttgggata agtgagaaaa
2551 taatttttgg catttatttt aaaccgattg ggtgctgcca tgttgactta
2601 gtcaatcggt gtctctcaac tctctctatg tatcggtgta ttggagtcct
2651 atatatatgg agactctaat ggcataaatg taaataaaag aactttaatt
2701 tgaaattcaa aggaaaaggc taaagcggcc atccgtctaa tatt