Sequence of DPV Bhendi yellow vein mosaic virus
Bhendi yellow vein mosaic virus [India:Bangalore:OY34:2005] segment DNA-A, complete sequence.
ACC No: GU112064
Dated: 2012-05-20 | Length: 2743 | CRC: -1328454807
ID GU112064; SV 1; circular; genomic DNA; STD; VRL; 2743 BP.
XX
AC GU112064;
XX
DT 02-JAN-2011 (Rel. 107, Created)
DT 20-MAY-2012 (Rel. 112, Last updated, Version 2)
XX
DE Bhendi yellow vein mosaic virus [India:Bangalore:OY34:2005] segment DNA-A,
DE complete sequence.
XX
KW .
XX
OS Bhendi yellow vein mosaic virus [India:Bangalore:OY34:2005]
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
XX
RN [1]
RP 1-2743
RX PUBMED; 22447131.
RA Venkataravanappa V., Lakshminarayana Reddy C.N., Jalali S.,
RA Krishna Reddy M.;
RT "Molecular characterization of distinct bipartite begomovirus infecting
RT bhendi (Abelmoschus esculentus L.) in India";
RL Virus Genes 44(3):522-535(2012).
XX
RN [2]
RP 1-2743
RA Venkataravanappa V., Lakshiminarayanareddy C.N., Devaraju, Swaranalatha P.,
RA Jalali S., Krishnareddy M.;
RT "Molecular genetic diversity of begomoviruses infecting okra in India";
RL Unpublished.
XX
RN [3]
RP 1-2743
RA Venkataravanappa V., Lakshiminarayanareddy C.N., Devaraju, Swaranalatha P.,
RA Jalali S., Krishnareddy M.;
RT ;
RL Submitted (01-OCT-2009) to the INSDC.
RL Division of Plant Pathology, Indian Institute of Horticultural Research,
RL Hessaraghatta Lake PO, Bangalore, Karnataka 560089, India
XX
FH Key Location/Qualifiers
FH
FT source 1. .2743
FT /organism="Bhendi yellow vein mosaic virus
FT [India:Bangalore:OY34:2005]"
FT /segment="DNA-A"
FT /host="Abelmoschus esculentus (okra)"
FT /isolate="OY34"
FT /mol_type="genomic DNA"
FT /country="India:Bangalore, Karnataka"
FT /isolation_source="leaf"
FT /collected_by="V.Venkataravanappa"
FT /collection_date="2005"
FT /db_xref="taxon:908087"
FT gene 121. .486
FT /gene="AV2"
FT CDS 121. .486
FT /codon_start=1
FT /gene="AV2"
FT /product="precoat protein"
FT /db_xref="GOA:E7BPQ2"
FT /db_xref="InterPro:IPR002511"
FT /db_xref="InterPro:IPR005159"
FT /db_xref="UniProtKB/TrEMBL:E7BPQ2"
FT /protein_id="ADO40926.1"
FT /translation="MWDPLLNEFPDTVHGFRCMLSVKYLQLLSQDYSPDTLGYELLRDL
FT ICILRSRNYVEASCRYRHFYARVESTPASEFRQPIHQPCCCPHCPRHKTTGMDKQAYEQ
FT ETQNVPDVQKSGCSKGM"
FT gene 281. .1051
FT /gene="AV1"
FT CDS 281. .1051
FT /codon_start=1
FT /gene="AV1"
FT /product="coat protein"
FT /db_xref="GOA:E7BPQ3"
FT /db_xref="InterPro:IPR000263"
FT /db_xref="InterPro:IPR000650"
FT /db_xref="UniProtKB/TrEMBL:E7BPQ3"
FT /protein_id="ADO40927.1"
FT /translation="MSKRAADIVISTPASKVRRRLNFGSPYTSRAAAPIVRVTKQQAWT
FT NRPMNRKPRMYRMYRSPDVPRGCEGPCKVQSFESRHDVVHIGKVMCISDVTRGVGLTHR
FT IGKRFCVKSVYVLGKIWMDENIKTKNHTNSVMFFLVRDRRPVDKPQDFGEVFNMFDNEP
FT STATVKNMHRDRYQVLRKWHATVTGGQYAAREQALVKKFVRVNNYVVYNQQEAGKYENH
FT TENALMLYMACTHASNPVYATLKIRIYFYDSVTN"
FT gene complement(629. .985)
FT /gene="AC5"
FT CDS complement(629. .985)
FT /codon_start=1
FT /gene="AC5"
FT /product="AC5 protein"
FT /db_xref="InterPro:IPR006892"
FT /db_xref="UniProtKB/TrEMBL:E7BPQ4"
FT /protein_id="ADO40928.1"
FT /translation="MGTSHIKHQCILGVILVFSCLLLVVNNIIVNPDKLLDQRLFPSCI
FT LTTSNGCMPFPQHLVPIPMHVLHGRRTGLVIKHIKYFTKILWFIYRSSITNKEKHHRIR
FT MVLGLNVLVHPYLT"
FT gene complement(1054. .1458)
FT /gene="AC3"
FT CDS complement(1054. .1458)
FT /codon_start=1
FT /gene="AC3"
FT /product="replication enhancer protein"
FT /db_xref="GOA:E7BPQ5"
FT /db_xref="InterPro:IPR000657"
FT /db_xref="UniProtKB/TrEMBL:E7BPQ5"
FT /protein_id="ADO40929.1"
FT /translation="MDSRTGARITAAQAKNGVYIWKVPNPLYFKILNHDNRPFTTNMDI
FT ITLRIHFNYSLRKALGIHKCFLTFRIWTTLHPQTGLFLRVFKTQVLKYLNNLGVISLNL
FT VIKAVEHVLYNVVNQTMYVDQYSDIKFKLY"
FT gene complement(1151. .1603)
FT /gene="AC2"
FT CDS complement(1151. .1603)
FT /codon_start=1
FT /gene="AC2"
FT /product="transcription activator protein"
FT /db_xref="GOA:E7BPQ6"
FT /db_xref="InterPro:IPR000942"
FT /db_xref="UniProtKB/TrEMBL:E7BPQ6"
FT /protein_id="ADO40930.1"
FT /translation="MQHSSFSPNRCTRVPIKVQHREAKRRIRRRRVDLECGCSYYLSIN
FT CHNHGFSHRGTHHCSSSKEWRLYLEGSKSPLFQDPQPRQPSIHDEHGHNNTQDPFQLQP
FT TESSGNTQVFSNLPNLDDLTPSDWSFLKGLQNPSPQISQQSRCNLT"
FT gene complement(1500. .2588)
FT /gene="AC1"
FT CDS complement(1500. .2588)
FT /codon_start=1
FT /gene="AC1"
FT /product="replicase"
FT /db_xref="GOA:E7BPQ7"
FT /db_xref="InterPro:IPR001191"
FT /db_xref="InterPro:IPR001301"
FT /db_xref="InterPro:IPR022690"
FT /db_xref="InterPro:IPR022692"
FT /db_xref="UniProtKB/TrEMBL:E7BPQ7"
FT /protein_id="ADO40931.1"
FT /translation="MPSKRFQIYSKNYFLTYPKCSLTKEEALSQIQNLQTPTNKKFIKI
FT CKELHENGEPHLHVLIQFEGKYKCQNQRFFDLVSPSRSVHFHPNIQGAKSSSDVKSYID
FT KDGDTLEWGEFQIDGRSARGGQQTANDAYAAALNAGSKSEALRVIRELAPKDYVLQFHN
FT LNANLDRIFTPPLEVYVSPFLSSSFDQVPEELEEWVSENVVEAAARPLRSLSLVLEGES
FT RTGKTQWARSLGPHNYLCGHLDLSPKVYSNDAWFNIIDDVDPHYLKHFKEFMGAQRDWQ
FT SNTKYGRPVQIKGGIPPIFLCNPGPNASYKEFLDEEKNSALKAWALKNAAFVFLTEPLY
FT SGTNQSTAQGSEETHQEEESRS"
FT gene complement(2132. .2434)
FT /gene="AC4"
FT CDS complement(2132. .2434)
FT /codon_start=1
FT /gene="AC4"
FT /product="AC4 protein"
FT /db_xref="InterPro:IPR002488"
FT /db_xref="UniProtKB/TrEMBL:E7BPQ8"
FT /protein_id="ADO40932.1"
FT /translation="MGNLIFTCSSSSRGNTSARISDSSTWSPQAGQYISIQTFRELNQA
FT QMSSPTSTRTETPSNGESFRSMDDLQEGDSKQPTTLTQQHLTQAVSQRLLESLGS"
XX
SQ Sequence 2743 BP; 728 A; 550 C; 643 G; 822 T; 0 other;
gu112064 Length: 2743 20-MAY-2012 Type: N Check: 875 ..
1 accggatggc cgcgcgattt ttttaagtgg tgggtccaga acgcacgatg
51 atgcagactc aaagcctaga taacgctcct tcggctataa gtacgtgcgc
101 actaagttac aattcaaaaa atgtgggatc cactattaaa cgaatttccg
151 gatacggttc acgggtttcg ttgtatgcta tctgtaaaat atttgcaact
201 tttgtcgcag gattattctc cagatacgct tgggtacgag ttattacggg
251 atttaatttg tattttacgc tctcgtaatt atgtcgaagc gagctgccga
301 tatcgtcatt tctacgcccg cgtcgaaagt acgccggcgt ctgaatttcg
351 gcagcccata caccagccgt gctgctgccc ccattgtccg cgtcacaaaa
401 caacaggcat ggacaaacag gcctatgaac aggaaaccca gaatgtaccg
451 gatgtacaga agtccggatg ttccaagggg atgtgagggt ccctgtaagg
501 tacagtcttt tgaatctcga cacgatgtcg ttcatattgg taaggtaatg
551 tgtatatctg atgttacgcg tggagtcggt ttgacccatc gtataggtaa
601 gcgtttttgt gtcaagtcag tttatgtttt aggtaagata tggatggacg
651 agaacattaa gaccaagaac catacgaatt cggtgatgtt tttccttgtt
701 cgtgatcgac gaccggtaga taaaccacaa gattttggtg aagtatttaa
751 tatgtttgat aacgagccca gtacggcgac cgtgaagaac atgcataggg
801 atcggtacca ggtgttgagg aaatggcatg caaccgttac tggtggtcaa
851 tatgcagcta gggaacaggc gttggtcaag aagtttgtca gggttaacaa
901 ttatgttgtt tacaaccagc aggaggcagg aaaatacgag aatcacaccg
951 agaatgcatt gatgctttat atggcttgta cccatgctag taacccagtg
1001 tatgctacgc ttaagattcg tatttatttt tatgactctg taacgaattg
1051 aaattaataa agtttgaatt ttatatctga atattggtct acatacattg
1101 tctgattaac tacattgtac aatacatgtt cgacggcttt aataactaaa
1151 ttaagtgaga ttacacctag attgttgaga tatttgagga cttgggtttt
1201 gaagaccctt aagaaaagac cagtctgagg gtgtaaggtc gtccagattc
1251 ggaaggttag aaaacacttg tgtattccca gagctttccg taggctgtag
1301 ttgaaatgga tcctgagtgt tattatgtcc atgttcgtcg tgaatggacg
1351 gttgtcgtgg ttgaggatct tgaaatagag gggatttgga accttccaga
1401 tatagacgcc attctttgct tgagctgcag tgatgcgtgc ccctgtgcga
1451 gaatccatgg ttgtggcagt tgatagagag ataataagaa cacccgcatt
1501 caagatctac tctcctcctc ctgatgcgtc tcttcgcttc cctgtgctgt
1551 actttgattg gtacccgagt acaacggttc ggtgagaaag acgaatgctg
1601 cattttttaa agcccacgct ttcaaagctg agttcttttc ctcgtccaag
1651 aattctttat agcttgcgtt ggggcctgga ttgcatagga agattggtgg
1701 aatgcctcct ttaatttgaa ctggcctccc gtactttgtg tttgattgcc
1751 agtccctttg ggcccccatg aattctttaa agtgtttcag ataatgcggg
1801 tcaacatcat ctataatgtt gaaccacgca tcgtttgaat acactttagg
1851 gcttagatcc aagtgcccac ataaataatt atgtggcccc aaggaacggg
1901 cccattgtgt tttcccagtt ctagactccc cctctagaac taaactcaaa
1951 gaacgcagag gccgcgcagc ggcttccacg acgttttccg atacccattc
2001 ctcaagttct tctggaactt gatcgaaaga agaagataaa aaaggagaaa
2051 cataaacctc caagggaggt gtaaaaatcc tatctaaatt ggcatttaaa
2101 ttatgaaatt gtaatacata atccttaggt gctaactccc taatgactct
2151 aagagcctct gacttactgc ctgcgttaag tgctgctgcg taagcgtcgt
2201 tggctgtttg ctgtccccct cttgcagatc gtccatcgat ctgaaactct
2251 ccccattcga gggtgtctcc gtccttgtcg atgtaggact tgacatctga
2301 gcttgattta gctccctgaa tgtttggatg gaaatgtact gacctgcttg
2351 gggagaccag gtcgaagaat cgctgattct ggcacttgta tttcccctcg
2401 aactggatga gcacgtgaag atgaggttcc ccattctcgt gaagctcttt
2451 gcagattttg atgaattttt tatttgttgg ggtttgtagg ttttggattt
2501 gggaaagtgc ttcctcttta gtaagagagc attttggata agtaaggaaa
2551 taatttttgg aatatatttg aaagcgttta gaaggcatgt tgactaaaat
2601 tgaggacccg attgaccgct cttgcaactc tctctggtat atcggtaccc
2651 aatatatagt gagtaccaaa tggcatatgt gtaattattg taactgaaat
2701 tcaaaatcct cacgctccaa aaagcggcca tccgtataat att