Sequence of DPV Pepper huasteco yellow vein virus
Pepper huasteco yellow vein virus isolate Guanajuato1 segment DNA A, complete sequence.
ACC No: GU128150
Dated: 2009-11-23 | Length: 2629 | CRC: 399607705
ID GU128150; SV 1; circular; genomic DNA; STD; VRL; 2629 BP.
XX
AC GU128150;
XX
DT 23-NOV-2009 (Rel. 102, Created)
DT 23-NOV-2009 (Rel. 102, Last updated, Version 1)
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DE Pepper huasteco yellow vein virus isolate Guanajuato1 segment DNA A,
DE complete sequence.
XX
KW .
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OS Pepper huasteco yellow vein virus
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
XX
RN [1]
RP 1-2629
RA Carrillo-Tripp J., Hernandez-Sandoval M., Perez-Gomez M.J.,
RA Rivera-Bustamante R.F.;
RT "Cloning and characterization of geminiviruses from Guanajuato using a
RT rolling circle amplification protocol";
RL Unpublished.
XX
RN [2]
RP 1-2629
RA Carrillo-Tripp J., Hernandez-Sandoval M., Perez-Gomez M.J.,
RA Rivera-Bustamante R.F.;
RT ;
RL Submitted (22-OCT-2009) to the EMBL/GenBank/DDBJ databases.
RL Ingenieria Genetica, Cinvestav Irapuato, Apdo. Postal 629, Irapuato, GTO
RL 36500, Mexico
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FH Key Location/Qualifiers
FH
FT source 1. .2629
FT /organism="Pepper huasteco yellow vein virus"
FT /segment="DNA A"
FT /host="tomato"
FT /isolate="Guanajuato1"
FT /mol_type="genomic DNA"
FT /country="Mexico"
FT /db_xref="taxon:223303"
FT gene 209. .964
FT /gene="av1"
FT CDS 209. .964
FT /codon_start=1
FT /gene="av1"
FT /product="coat protein"
FT /note="CP"
FT /protein_id="ACY95457.1"
FT /translation="MPKRDAPWRLTAGTAKISRTGNSSRALIMGPTTSRASAWVNRPMY
FT RKPRIYRMYRSPDVPKGCEGPCKVQSFEQRHDVSHVGKVICISDVTRGNGITHRVGKRF
FT CVKSVYILGKIWMDENIKLKNHTNSVMXWLVRDRRPYGTPMDFGQVFNMYDNEPSTATV
FT KNDLRDRYQVMHRFYAKVTGGQYASNEQALVRRFWKVNNHVVYNHQEAGKYENHTENAL
FT LLYMACTHASNPVYATLKIRVYFYDSIMN"
FT gene complement(961. .1359)
FT /gene="ac3"
FT CDS complement(961. .1359)
FT /codon_start=1
FT /gene="ac3"
FT /product="replication enhancer protein"
FT /protein_id="ACY95458.1"
FT /translation="MDLRTGVPITAAQAANGVFIWELQNPLYFKIRLVETPMYTHSRVF
FT HIQVRANHNMRRALGLHKAYFNFQVWTTLTTISGQIYLNRFKLLVMFYLDNLGVISVNN
FT VIRAVSFATDKRYVNAVLENHEIIYKLY"
FT gene complement(1106. .1522)
FT /gene="ac2"
FT CDS complement(1106. .1522)
FT /codon_start=1
FT /gene="ac2"
FT /product="transcription activator protein"
FT /protein_id="ACY95459.1"
FT /translation="MTGSKKTPSTSPSKKLSSPPAIKLRHRFAKRQTRRRRIDLACGCS
FT IYIHINCVNNGFTHRGTHHCSSSSEWRFYMGASKSPIFQNKVSGDPNVHTQQGVSHSGQ
FT SQPQHEESAGSPQSLLQLPSLDDVDDDFWADLLK"
FT gene complement(1443. .2492)
FT /gene="ac1"
FT CDS complement(1443. .2492)
FT /codon_start=1
FT /gene="ac1"
FT /product="replication associated protein"
FT /protein_id="ACY95460.1"
FT /translation="MPLPKRFRLNAKNYFLTYPQCSISKEDALAQLQNLSTPVNKKYIK
FT ICKESHEDGQPHLHVLIQFEGKYQCTNIRFFDLVSSTRSAYFHPNIQGAKSSSDVKTYI
FT DKDGDTVEWGEFQIDGRSARGGQQSANDTYAKALNSASAEDALQIIKEEQPQHFFLQFH
FT NIVSNANRIFQTPPEPWVPPFQQASFNNVPEIMTQWVSENVCDAAARPLRPLSLVVEGP
FT SRTGKTLWARSLGPHNYICGHMDLSPKIYSNNAWYNVIDDIPPHYVKHFKEFMGAQRDW
FT QSNCKYGKPIQIKGGIPTIFLCNPGPQSSYKEYLNEEKNRSLNDWVQKNAIYVTIEEAI
FT FTTSNQASP"
XX
SQ Sequence 2629 BP; 670 A; 523 C; 637 G; 798 T; 1 other;
gu128150 Length: 2629 23-NOV-2009 Type: N Check: 8520 ..
1 accggatggc cgaccgcttc cattctctat ccgtaccgct ttaatttgaa
51 ttaaagatgt cacttttaga ctgaccaatg aggatgcgtc tggcgagctt
101 agataaccgt tccagacgtg gggaccaagt agtggaagac cacttttttg
151 actggcagct ttataaaatg aactacatca ttagtggtcc attaaccttt
201 aattcaaaat gcctaagcgt gatgctcctt ggcgattaac ggcggggacc
251 gccaagatta gtcgaactgg caatagttcg cgggctctta tcatgggccc
301 gactaccagc agggcctcag cttgggttaa tcgcccaatg tacaggaagc
351 cccggattta tcgtatgtac agatctccgg atgtgccgaa aggttgtgaa
401 gggccgtgta aggtccaatc gtttgagcaa cgacatgatg tctctcatgt
451 tggtaaggtt atttgtatat ccgacgtcac tcgtggtaat ggtattaccc
501 atcgtgttgg caaacgattc tgcgttaagt ccgtctatat tctgggcaaa
551 atctggatgg atgaaaatat taagttgaag aatcacacca acagcgtcat
601 gttstggttg gttagggata ggagacccta cggtacgcct atggattttg
651 gccaagtgtt taacatgtac gacaacgagc ccagtaccgc tactgtgaag
701 aacgatcttc gtgatcgtta tcaagttatg cacagattct atgctaaggt
751 cacgggtgga caatatgcca gcaacgagca agccttggtt aggcgtttct
801 ggaaggttaa caaccatgtt gtgtacaacc atcaggaggc tggcaaatat
851 gagaaccaca cggagaatgc gctattattg tatatggcat gtactcatgc
901 atctaatccc gtgtatgcaa cactgaaaat tcgggtctat ttttacgact
951 cgataatgaa ttaataaagt ttgtatatta tttcatggtt ctcaagtaca
1001 gcattgacat atcgtttgtc cgtagcaaac gaaacagctc gaattacatt
1051 gttaacggaa ataacaccta agttatctaa ataaaacatt acaagcaact
1101 taaatctatt taagtaaatc tgcccagaaa tcgtcgtcaa cgtcgtccag
1151 acttggaagt tgaagtaggc tttgtggaga cccagcgctc tcctcatgtt
1201 gtggttggct ctgacctgaa tgtgaaacac cctgctgtgt gtgtacattg
1251 gggtctccac taaccttatt ttgaaatata ggggattttg aagctcccat
1301 ataaaaacgc cattcgctgc ttgagctgca gtgatgggta cccctgtgcg
1351 taaatccatt gttaacacag ttaatatgta tgtatattga acagccgcaa
1401 gcgagatcaa tccttctacg tctcgtttgt ctcttcgcaa atctatggcg
1451 aagcttgatt gctggtggtg aagatagctt cttcgatggt gacgtagatg
1501 gcgttttttt ggacccagtc attgaggctc ctatttttct cctcgttgag
1551 gtactcttta taggaggact gggggcccgg attgcaaaga aagatagtgg
1601 gtattccacc tttaatttga attggtttgc cgtatttaca gtttgattgc
1651 caatcccgtt gggcccccat aaactccttg aagtgcttta cgtagtgcgg
1701 agggatgtca tcaatgacgt tgtaccatgc attattggag tagatttttg
1751 ggctgagatc catatgacca catatgtaat tgtgtgggcc gagacttcgg
1801 gcccataatg ttttgccggt ccgtgaagga ccctcaacca ctaatgacaa
1851 tggtctcagc ggccgcgcag cggcatcaca cacattttca gacacccatt
1901 gtgtcattat ttctggtaca ttattgaacg acgcctgctg aaatggagga
1951 acccatggtt ccggaggtgt ttggaatatc cggttagcgt ttgacacaat
2001 gttatgaaat tgtaggaaga aatgttgggg ttgttcttcc tttattatct
2051 gcagagcgtc ttctgcagat gctgaattta acgctttagc atatgtgtcg
2101 ttagcagatt gctggcctcc tctagcagat ctgccgtcta tttggaattc
2151 tccccattct acggtatcgc cgtctttgtc gatgtaggtc ttgacatcgg
2201 agcttgattt agctccctga atgttcggat ggaaatatgc tgatctggtt
2251 gaggatacga ggtcaaagaa tcggatgttc gtgcattggt attttccttc
2301 gaattgaata agcacgtgca gatgaggttg cccatcttca tgagattctt
2351 tgcatatttt gatgtatttt ttgtttaccg gcgtcgagag gttttgtaat
2401 tgagcgagag cgtcttcttt ggaaatggaa cattgaggat atgtgaggaa
2451 atagttcttg gcatttaaac gaaatcgttt aggcagtggc atatttgtaa
2501 taagagaggt gtacaccgat tggagctctt taacctgggc tgattgtatc
2551 ggtgtattgg tagccaatat atagtatatg ggagttatct aggatcttcg
2601 tacacgtgga ggccatccgt tataatatt