Sequence of DPV Chilli leaf curl virus
Chilli leaf curl virus isolate India:Amritsar:Papaya:2009 segment DNA A, complete sequence.
ACC No: GU136803
Dated: 2009-11-18 | Length: 2763 | CRC: 1721838803
ID GU136803; SV 1; circular; genomic DNA; STD; VRL; 2763 BP.
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AC GU136803;
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DT 18-NOV-2009 (Rel. 102, Created)
DT 18-NOV-2009 (Rel. 102, Last updated, Version 1)
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DE Chilli leaf curl virus isolate India:Amritsar:Papaya:2009 segment DNA A,
DE complete sequence.
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KW .
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OS Chilli leaf curl virus
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
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RN [1]
RP 1-2763
RA Pasumarthy K., Hussain S., Mukherjee S.K.;
RT "Identification of monopartite Chilli leaf curl virus infection in Papaya
RT in northern India";
RL Unpublished.
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RN [2]
RP 1-2763
RA Pasumarthy K., Hussain S., Mukherjee S.K.;
RT ;
RL Submitted (25-OCT-2009) to the EMBL/GenBank/DDBJ databases.
RL Plant Molecular Biology, International Centre for Genetic Engineering and
RL Biotechnology, Aruna Asaf Ali Marg, New Delhi, Delhi 110067, India
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FH Key Location/Qualifiers
FH
FT source 1. .2763
FT /organism="Chilli leaf curl virus"
FT /segment="DNA A"
FT /host="papaya"
FT /isolate="India:Amritsar:Papaya:2009"
FT /mol_type="genomic DNA"
FT /country="India:northern"
FT /collection_date="11-Sep-2009"
FT /db_xref="taxon:172278"
FT stem_loop join(2743. .2763,1. .13)
FT gene 147. .512
FT /gene="AV2"
FT CDS 147. .512
FT /codon_start=1
FT /gene="AV2"
FT /product="AV2"
FT /protein_id="ACY72167.1"
FT /translation="MWDPLVNEFPETVHGFRCMLAVKYLQLVENTYSPDTLGYDLIRDL
FT ISVIRARNYVEATSRYNHFHARFEGTPPSQLRQPICQPCCCPHCPRHKGKGMGQQAHEQ
FT EAQDVQDVQEPRCSKGV"
FT gene 307. .1077
FT /gene="AV1"
FT CDS 307. .1077
FT /codon_start=1
FT /gene="AV1"
FT /product="AV1"
FT /protein_id="ACY72169.1"
FT /translation="MSKRPADIIISTPASKVRRRLNFDSPYASRAAAPIVRVTKARAWA
FT NRPMNRKPRMYRMYRSPDVPRGCEGPCKVQSFESRHDVVHIGKVMCISDVTRGTGLTHR
FT VGKRFCVKSVYVLGKIWMDENIKTKNHTNSVMFFLVRDRRPVDKPQDFGEVFNMFDNEP
FT STATVKNMHRDRYQVLRKWHATVTGGQYASKEQALVKKFVRVNNYVVYNQQEAGKYENH
FT TENALMLYMACTHASNPVYATLKIRIYFYDSVSN"
FT gene complement(1074. .1478)
FT /gene="AC3"
FT CDS complement(1074. .1478)
FT /codon_start=1
FT /gene="AC3"
FT /product="AC3"
FT /protein_id="ACY72168.1"
FT /translation="MDSRTGEPITAAQAENSVFIWEITNPLYFKITEHHNRPFLRNHDI
FT ITVQIRFNHNLRKALGIHKCFLTFRIWTTLQPQTGHFLRVFRTQVYKYLNNFAVISINN
FT VLRAVNHVLWNVLAQTIHVQSSNIIKFNLY"
FT gene complement(1219. .1623)
FT /gene="AC2"
FT CDS complement(1219. .1623)
FT /codon_start=1
FT /gene="AC2"
FT /product="AC2"
FT /protein_id="ACY72170.1"
FT /translation="MRPSSPSKAHSTQVPIKVQHRLAKKGTMRRRVDLDCGCSYFIALR
FT CHGYGFTHRGTHHCSSSREFRVYLGDNKSPVFQDNRAPQPAIPEEPRHHHRADTVQSQP
FT EESVGDTQMFSNLPNLDDLTASDWSFLKGI"
FT gene complement(1526. .2611)
FT /gene="AC1"
FT CDS complement(1526. .2611)
FT /codon_start=1
FT /gene="AC1"
FT /product="AC1"
FT /protein_id="ACY72171.1"
FT /translation="MAPPKRFQIYAKNYFLTYPQCSLTKEEALSQLQNLSTPTNKLFIR
FT VSRELHENGEPHLHVLIQFEGKFKCQNNRFFDLVSPTRPAHFHPNIQGAKSSSDVKAYV
FT EKDGDFIDFGVFQIDGRSARGGQQSANDAYAEAINSGSKAAALNILREKAPKDFVLQFH
FT NLNANLDRIFTPPLEVYVSPFTSSSFDQVPEEFDVWAAENVLGAAARPLRPISIVIEGE
FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDW
FT QSNTKYGKPVQIKGGIPAIFLCNPGPNSSYKEFLDEEKNSALKNWALKNATFITLEGPL
FT YSGSNQSAAQAGQEGDHASSG"
FT gene complement(2161. .2460)
FT /gene="AC4"
FT CDS complement(2161. .2460)
FT /codon_start=1
FT /gene="AC4"
FT /product="AC4"
FT /protein_id="ACY72172.1"
FT /translation="MRMGNLIYTSSYNSKVNSNARTTDSSTSFPQPDQHISIRTFRELK
FT ARQMSRPMWRKTETSLILEFSKSMADQLEEVSSLPTTHMPRQSIQGPKLRPSIY"
FT TATA_signal 2672. .2679
XX
SQ Sequence 2763 BP; 751 A; 562 C; 645 G; 805 T; 0 other;
gu136803 Length: 2763 18-NOV-2009 Type: N Check: 3595 ..
1 accggatggc tgcgattttt ttttatgtgg gccccaccgc gcacgtgctg
51 acaaagacat gtgcaccaat taaaatcgtc cctcatagct taattattgc
101 atggtccccc ctataaactt gggttccaag tagtgcactc ttaccaatgt
151 gggatccatt agtaaacgag tttcctgaaa ccgttcacgg ttttaggtgt
201 atgttagcag ttaaatatct gcagctagta gaaaatacat attccccaga
251 cactctgggc tacgatttaa tcagggatct aatttcagtt attagggcta
301 gaaattatgt cgaagcgacc agcagatata atcatttcca cgcccgcttc
351 gaaggtacgc cgccgtctca acttcgacag cccatatgcc agccgtgctg
401 ctgcccccat tgtccgcgtc acaaaggcaa gggcatgggc caacaggccc
451 atgaacagga agcccaggat gtacaggatg tacaggagcc cagatgttcc
501 aagggggtgt gaaggcccat gtaaggtcca gtcttttgag tctagacacg
551 atgtagttca tatagggaag gttatgtgta ttagtgatgt tacccgtggt
601 actgggttaa cccatagagt aggtaagcgt ttctgtgtta agtctgtgta
651 tgtattaggg aagatatgga tggatgagaa tatcaagact aagaatcaca
701 cgaatagtgt gatgttcttc cttgtccgtg atcgtcgtcc tgttgataaa
751 ccacaagatt ttggagaggt gttcaacatg tttgacaacg agcctagcac
801 tgccactgtg aagaatatgc atagagatcg ttatcaggta ttgaggaaat
851 ggcacgcaac ggttactggt ggacagtacg cgtcgaagga acaggcatta
901 gttaagaagt tcgttagggt taataattat gttgtgtata accagcagga
951 agctggtaaa tatgagaatc ataccgagaa tgcattgatg ttatacatgg
1001 cgtgtaccca cgcctctaat cctgtgtatg ctaccttaaa gatacggatc
1051 tatttctatg attcagtatc gaattaataa agattgaatt ttattatatt
1101 tgaactttgt acatgaattg tttgtgctaa tacattccat aatacatggt
1151 tgacagctct aagtacattg tttatactaa ttacagcaaa attatttaaa
1201 tacttataca cttgggtcct aaataccctt aagaaatgac cagtctgagg
1251 ctgtaaggtc gtccagattc ggaaggttag aaaacatttg tgtatcccca
1301 acgctttcct caggttgtga ttgaaccgta tctgcacggt gatgatgtcg
1351 tggttcctca ggaatggccg gttgtggtgc tcggttatct tgaaatacag
1401 gggatttgtt atctcccaga taaacacgga attctctgct tgagctgcag
1451 tgatgggttc ccctgtgcgt gaatccatag ccgtggcagc gtaatgcgat
1501 gaaatatgaa caaccgcagt ctaggtcaac ccgacgacgc atggtcccct
1551 tcttggccag cctgtgctgc actttgattg gaacctgagt agagtgggcc
1601 ttcgagggtg atgaaggtcg cattctttaa agcccaattt ttgagtgcgc
1651 tatttttctc ttcatccaag aactctttat agctagaatt gggtcctgga
1701 ttgcagagga agatagcggg aattccacct ttaatttgaa ctggctttcc
1751 gtactttgta tttgattgcc agtccctttg ggcccccatg aattccttaa
1801 agtgctttag gtagtgcgga tcaacgtcat caatgacgtt gtaccaggcg
1851 tcattactgt agacctttgg gctaaggtct agatgtccac acaaatagtt
1901 gtgtggaccc aacgaccgag cccacatcgt cttccccgtt ctactctcac
1951 cctctatgac aatacttatg ggtcttaatg gccgcgcagc ggcaccgaga
2001 acattctcgg cagcccatac gtcaaattcc tcgggaactt gatcaaaaga
2051 agaagaagta aaaggagaaa cataaacctc caacggaggt gtaaaaatcc
2101 tatctaaatt agcatttaaa ttatgaaatt gtaatacaaa atctttggga
2151 gctttctccc ttaatatatt gagggccgca gctttggacc ctgaattgat
2201 tgcctcggca tatgcgtcgt tggcagactg ctgacctcct ctagctgatc
2251 tgccatcgat ttggaaaact ccaaaatcaa tgaagtctcc gtctttctcc
2301 acataggcct tgacatctga cgagctttta gctccctgaa tgttcggatg
2351 gaaatgtgct ggtctggttg gggaaacgag gtcgaagaat ctgttgttct
2401 ggcatttgaa tttaccttcg aattgtatga ggacgtgtag atgaggttcc
2451 ccattctcat gtaattcgcg agaaaccctg atgaataatt tattagtggg
2501 ggtgcttagg ttttgaagtt gggaaagtgc ctcttcttta gtgagggaac
2551 actgtggata tgttaagaaa taatttttag catatatttg aaaacgtttt
2601 ggaggagcca ttttgacttg gtcaattggt actcaacaaa cttggctatg
2651 caatcggtga atggtactca atatatagtg tgagtaccaa atggcatagt
2701 cgtaattttg gaagaaagtt caaaattcaa attccgacaa aagcggccat
2751 ccgcactaat att