Sequence of DPV Potato virus X

Potato virus X isolate Sam-15-PVX coat protein (cp) gene, complete cds.

ACC No: GU144351

Dated: 2010-09-07 | Length: 924 | CRC: -526352682

                
ID   GU144351; SV 1; linear; genomic RNA; STD; VRL; 924 BP.
XX
AC   GU144351;
XX
DT   23-DEC-2009 (Rel. 103, Created)
DT   07-SEP-2010 (Rel. 106, Last updated, Version 2)
XX
DE   Potato virus X isolate Sam-15-PVX coat protein (cp) gene, complete cds.
XX
KW   .
XX
OS   Potato virus X
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Tymovirales;
OC   Alphaflexiviridae; Potexvirus.
XX
RN   [1]
RP   1-924
RA   Mortensen R.J., Shen X., Reid A., Mulholland V.;
RT   "Characterization of Viruses Infecting Potato Plants from a Single Location
RT   in Shetland, an Isolated Scottish Archipelago";
RL   J. Phytopathol. 158(9):633-640(2010).
XX
RN   [2]
RP   1-924
RA   Mortensen R.J., Shen X., Reid A., Mulholland V.;
RT   ;
RL   Submitted (29-OCT-2009) to the EMBL/GenBank/DDBJ databases.
RL   Diagnostics and Molecular Biology Section, SASA (Science and Advice for
RL   Scottish Agriculture), Roddinglaw Road, Edinburgh, Midlothian EH12 9FJ, UK
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .924
FT                   /organism="Potato virus X"
FT                   /host="potato, Romano cultivar"
FT                   /isolate="Sam-15-PVX"
FT                   /mol_type="genomic RNA"
FT                   /country="United Kingdom:Scotland"
FT                   /db_xref="taxon:12183"
FT   gene            148. .861
FT                   /gene="cp"
FT   CDS             148. .861
FT                   /codon_start=1
FT                   /gene="cp"
FT                   /product="coat protein"
FT                   /db_xref="GOA:Q77LU0"
FT                   /db_xref="InterPro:IPR000052"
FT                   /db_xref="UniProtKB/TrEMBL:Q77LU0"
FT                   /protein_id="ADA57751.1"
FT                   /translation="MSAPASTTQATGSTTSTTTKTAGATPATASGLFTIPDGDFFSTAR
FT                   AIVASNAVATNEDLSKIEAIWKDMKVPTDTMAQAAWDLVRHCADVGSSAQTEMIDTGPY
FT                   SNGISRARLAAAIKEVCTLRQFCMKYAPVVWNWMLTNNSPPANWQAQGFKPEHKFAAFD
FT                   FFNGVTNPAAIMPKEGLIRPPSEAEMNAAQTAAFVKITKARAQSNDFASLDAAVTRGRI
FT                   TGTTTAEAVVTLPPP"
XX
SQ   Sequence 924 BP; 258 A; 248 C; 212 G; 206 T; 0 other;

gu144351 Length: 924  07-SEP-2010  Type: N  Check: 8944  ..

       1  tggtgaggac tgaaccttgt gtcatcaaga ttactggaga atcaatcaca
      51  gtgttggctt gcaaattaga tgcagaaacc atcagagcca ttgccgatct
     101  caagccactc tccgctgaac ggttaagttt ccattgatac tcgaaagatg
     151  tcagcaccag ctagcacaac acaggccaca gggtcaacta cctcaactac
     201  cacaaaaact gcaggcgcaa ctcctgccac agcttcagga ctgttcacca
     251  tcccggatgg ggatttcttt agtacagccc gcgctatagt agccagcaat
     301  gccgttgcaa caaatgagga cctcagcaag attgaggcta tctggaagga
     351  catgaaggtg cccacagaca ctatggcaca ggctgcttgg gacttagtca
     401  gacactgcgc tgatgtgggc tcatctgctc aaacagaaat gatagatacg
     451  ggtccctatt ccaacggcat cagcagagcc agactggcag cagcaatcaa
     501  agaggtgtgc acacttaggc aattttgcat gaagtatgcc ccggtggtat
     551  ggaactggat gctgactaac aacagtccac ctgctaactg gcaagcacaa
     601  ggtttcaagc ctgagcacaa atttgctgca ttcgacttct tcaatggagt
     651  caccaaccca gctgccatca tgcccaaaga ggggcttatc cggccaccgt
     701  ctgaagctga aatgaatgct gcccaaactg ctgcctttgt gaagattacg
     751  aaggctaggg cacaatccaa cgactttgcc agcctagatg cagctgtcac
     801  tcgaggtcgt atcactggaa caacaaccgc tgaggctgtt gtcactctcc
     851  caccaccata actacgtcta cataaccgac gcctacccca gtttcatagt
     901  attttctggt ttgattgtat gaat