Sequence of DPV Potato virus X

Potato virus X isolate Sam-12-PVX coat protein (cp) gene, complete cds.

ACC No: GU144354

Dated: 2010-09-07 | Length: 925 | CRC: 1615525080

                
ID   GU144354; SV 1; linear; genomic RNA; STD; VRL; 925 BP.
XX
AC   GU144354;
XX
DT   23-DEC-2009 (Rel. 103, Created)
DT   07-SEP-2010 (Rel. 106, Last updated, Version 2)
XX
DE   Potato virus X isolate Sam-12-PVX coat protein (cp) gene, complete cds.
XX
KW   .
XX
OS   Potato virus X
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Tymovirales;
OC   Alphaflexiviridae; Potexvirus.
XX
RN   [1]
RP   1-925
RA   Mortensen R.J., Shen X., Reid A., Mulholland V.;
RT   "Characterization of Viruses Infecting Potato Plants from a Single Location
RT   in Shetland, an Isolated Scottish Archipelago";
RL   J. Phytopathol. 158(9):633-640(2010).
XX
RN   [2]
RP   1-925
RA   Mortensen R.J., Shen X., Reid A., Mulholland V.;
RT   ;
RL   Submitted (29-OCT-2009) to the EMBL/GenBank/DDBJ databases.
RL   Diagnostics and Molecular Biology Section, SASA (Science and Advice for
RL   Scottish Agriculture), Roddinglaw Road, Edinburgh, Midlothian EH12 9FJ, UK
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .925
FT                   /organism="Potato virus X"
FT                   /host="potato, Marfona cultivar"
FT                   /isolate="Sam-12-PVX"
FT                   /mol_type="genomic RNA"
FT                   /country="United Kingdom:Scotland"
FT                   /db_xref="taxon:12183"
FT   gene            151. .864
FT                   /gene="cp"
FT   CDS             151. .864
FT                   /codon_start=1
FT                   /gene="cp"
FT                   /product="coat protein"
FT                   /db_xref="GOA:Q77LU0"
FT                   /db_xref="InterPro:IPR000052"
FT                   /db_xref="UniProtKB/TrEMBL:Q77LU0"
FT                   /protein_id="ADA57754.1"
FT                   /translation="MSAPASTTQATGSTTSTTTKTAGATPATASGLFTIPDGDFFSTAR
FT                   AIVASNAVATNEDLSKIEAIWKDMKVPTDTMAQAAWDLVRHCADVGSSAQTEMIDTGPY
FT                   SNGISRARLAAAIKEVCTLRQFCMKYAPVVWNWMLTNNSPPANWQAQGFKPEHKFAAFD
FT                   FFNGVTNPAAIMPKEGLIRPPSEAEMNAAQTAAFVKITKARAQSNDFASLDAAVTRGRI
FT                   TGTTTAEAVVTLPPP"
XX
SQ   Sequence 925 BP; 257 A; 248 C; 212 G; 208 T; 0 other;

gu144354 Length: 925  07-SEP-2010  Type: N  Check: 927  ..

       1  tgggcttgag gactgaacct tgtgtcatca agattactgg agaatcaatc
      51  acagtgttgg cttgcaaatt agatgcagaa actatcagag ccattgccga
     101  tctcaagcca ctctccgttg aacggttaag tttccattga tactcgaaag
     151  atgtcagcac cagctagcac aacacaggcc acagggtcaa ctacctcaac
     201  taccaccaaa actgcaggcg caactcctgc cacagcttca ggactgttca
     251  ccatcccgga tggggatttc tttagtacag cccgtgctat agtagccagc
     301  aatgccgttg caacaaatga ggacctcagc aagattgagg ctatctggaa
     351  ggacatgaag gtgcccacag acactatggc acaggctgct tgggacttag
     401  tcagacactg cgctgatgtg ggctcatctg ctcaaacaga gatgatagat
     451  acaggtccct attccaacgg cattagcaga gccagactgg cagcagcaat
     501  taaagaggtg tgcacactta ggcaattctg catgaagtat gccccagtgg
     551  tatggaactg gatgctgact aacaacagtc cacctgctaa ctggcaagca
     601  caaggtttca agcctgagca caaattcgct gcattcgact ttttcaacgg
     651  agtcaccaac ccagctgcca tcatgcctaa agaggggctc atccggccac
     701  cgtctgaagc tgaaatgaat gctgcccaaa ctgctgcctt tgtgaagatt
     751  acgaaggcca gggcacaatc caacgacttt gccagcctag atgcagctgt
     801  cactcgaggt cgtatcactg gaacaacaac cgctgaggct gttgtcaccc
     851  ttccaccacc ataactacgt ctacataacc gacgcctacc ccagtttcat
     901  agtattttct ggtttgattg tatga