Sequence of DPV Potato virus X

Potato virus X isolate Sam-04-PVX coat protein (cp) gene, complete cds.

ACC No: GU144355

Dated: 2010-09-07 | Length: 931 | CRC: 593538808

                
ID   GU144355; SV 1; linear; genomic RNA; STD; VRL; 931 BP.
XX
AC   GU144355;
XX
DT   23-DEC-2009 (Rel. 103, Created)
DT   07-SEP-2010 (Rel. 106, Last updated, Version 2)
XX
DE   Potato virus X isolate Sam-04-PVX coat protein (cp) gene, complete cds.
XX
KW   .
XX
OS   Potato virus X
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Tymovirales;
OC   Alphaflexiviridae; Potexvirus.
XX
RN   [1]
RP   1-931
RA   Mortensen R.J., Shen X., Reid A., Mulholland V.;
RT   "Characterization of Viruses Infecting Potato Plants from a Single Location
RT   in Shetland, an Isolated Scottish Archipelago";
RL   J. Phytopathol. 158(9):633-640(2010).
XX
RN   [2]
RP   1-931
RA   Mortensen R.J., Shen X., Reid A., Mulholland V.;
RT   ;
RL   Submitted (29-OCT-2009) to the EMBL/GenBank/DDBJ databases.
RL   Diagnostics and Molecular Biology Section, SASA (Science and Advice for
RL   Scottish Agriculture), Roddinglaw Road, Edinburgh, Midlothian EH12 9FJ, UK
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .931
FT                   /organism="Potato virus X"
FT                   /host="potato, Desiree cultivar"
FT                   /isolate="Sam-04-PVX"
FT                   /mol_type="genomic RNA"
FT                   /country="United Kingdom:Scotland"
FT                   /db_xref="taxon:12183"
FT   gene            149. .862
FT                   /gene="cp"
FT   CDS             149. .862
FT                   /codon_start=1
FT                   /gene="cp"
FT                   /product="coat protein"
FT                   /db_xref="GOA:Q77LU0"
FT                   /db_xref="InterPro:IPR000052"
FT                   /db_xref="UniProtKB/TrEMBL:Q77LU0"
FT                   /protein_id="ADA57755.1"
FT                   /translation="MSAPASTTQATGSTTSTTTKTAGATPATASGLFTIPDGDFFSTAR
FT                   AIVASNAVATNEDLSKIEAIWKDMKVPTDTMAQAAWDLVRHCADVGSSAQTEMIDTGPY
FT                   SNGISRARLAAAIKEVCTLRQFCMKYAPVVWNWMLTNNSPPANWQAQGFKPEHKFAAFD
FT                   FFNGVTNPAAIMPKEGLIRPPSEAEMNAAQTAAFVKITKARAQSNDFASLDAAVTRGRI
FT                   TGTTTAEAVVTLPPP"
XX
SQ   Sequence 931 BP; 259 A; 251 C; 216 G; 205 T; 0 other;

gu144355 Length: 931  07-SEP-2010  Type: N  Check: 6884  ..

       1  gggttgagga ctgaaccttg tgtcatcaag attactggag aatcaatcac
      51  agtgttggct tgcaaattag atgcagaaac catcagagcc attgccgatc
     101  tcaagccact ctccgctgaa cggttaagtt tccattgata ctcgaaagat
     151  gtcagcacca gctagcacaa cacaggccac agggtcaact acctcaacta
     201  ccacaaaaac tgcaggcgca actcctgcca cagcttcagg actgttcacc
     251  atcccggatg gggatttctt tagtacagcc cgcgctatag tagccagcaa
     301  tgccgttgca acaaatgagg acctcagcaa gattgaggct atctggaagg
     351  acatgaaggt gcccacagac actatggcac aggctgcttg ggacttagtc
     401  agacactgcg ctgatgtggg ctcatctgct caaacagaaa tgatagatac
     451  gggtccctat tccaacggca tcagcagagc cagactggca gcagcaatca
     501  aagaggtgtg cacacttagg caattttgca tgaagtatgc cccggtggta
     551  tggaactgga tgctgactaa caacagtcca cctgctaact ggcaagcaca
     601  aggtttcaag cctgagcaca aatttgctgc attcgacttc ttcaatggag
     651  tcaccaaccc agctgccatc atgcccaaag aggggcttat ccggccaccg
     701  tctgaagctg aaatgaatgc tgcccaaact gctgcctttg tgaagattac
     751  gaaggctagg gcacaatcca acgactttgc cagcctagat gcagctgtca
     801  ctcgaggtcg tatcactgga acaacaaccg ctgaggctgt tgtcactctc
     851  ccaccaccat aactacgtct acataaccga cgcctacccc agtttcatag
     901  tattttctgg tttgattgga tgacgcagtc a