Sequence of DPV Potato virus X

Potato virus X isolate Sam-24-PVX coat protein (cp) gene, complete cds.

ACC No: GU144363

Dated: 2010-09-07 | Length: 926 | CRC: -1261090765

                
ID   GU144363; SV 1; linear; genomic RNA; STD; VRL; 926 BP.
XX
AC   GU144363;
XX
DT   23-DEC-2009 (Rel. 103, Created)
DT   07-SEP-2010 (Rel. 106, Last updated, Version 2)
XX
DE   Potato virus X isolate Sam-24-PVX coat protein (cp) gene, complete cds.
XX
KW   .
XX
OS   Potato virus X
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Tymovirales;
OC   Alphaflexiviridae; Potexvirus.
XX
RN   [1]
RP   1-926
RA   Mortensen R.J., Shen X., Reid A., Mulholland V.;
RT   "Characterization of Viruses Infecting Potato Plants from a Single Location
RT   in Shetland, an Isolated Scottish Archipelago";
RL   J. Phytopathol. 158(9):633-640(2010).
XX
RN   [2]
RP   1-926
RA   Mortensen R.J., Shen X., Reid A., Mulholland V.;
RT   ;
RL   Submitted (29-OCT-2009) to the EMBL/GenBank/DDBJ databases.
RL   Diagnostics and Molecular Biology Section, SASA (Science and Advice for
RL   Scottish Agriculture), Roddinglaw Road, Edinburgh, Midlothian EH12 9FJ, UK
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .926
FT                   /organism="Potato virus X"
FT                   /host="potato, Merlin cultivar"
FT                   /isolate="Sam-24-PVX"
FT                   /mol_type="genomic RNA"
FT                   /country="United Kingdom:Scotland"
FT                   /db_xref="taxon:12183"
FT   gene            148. .861
FT                   /gene="cp"
FT   CDS             148. .861
FT                   /codon_start=1
FT                   /gene="cp"
FT                   /product="coat protein"
FT                   /db_xref="GOA:D2JYR3"
FT                   /db_xref="InterPro:IPR000052"
FT                   /db_xref="UniProtKB/TrEMBL:D2JYR3"
FT                   /protein_id="ADA57763.1"
FT                   /translation="MSAPASTTQATGSTTSTTTKTAGATPATASGLFTIPDGDFFSTAR
FT                   AIVASNAVATNEDLCKIEAIWKDMKVPTDTMAQAAWDLVRHCADVGSSAQTEMIDTGPY
FT                   SNGISRARLAAAIKEVCTLRQFCMKYAPVVWNWMLTNNSPPANWQAQGFKPEHKFAAFD
FT                   FFNGVTNPAAIMPKEGLIRPPSEAEMNAAQTAAFVKITKARAQSNDFASLDAAVTRGRI
FT                   TGTTTAEAVVTLPPP"
XX
SQ   Sequence 926 BP; 261 A; 249 C; 208 G; 208 T; 0 other;

gu144363 Length: 926  07-SEP-2010  Type: N  Check: 2103  ..

       1  acttgaggac tgaaccttgt gtcatcaaga ttactggaga atcaatcaca
      51  gtgttggctt gcaaattaga tgcagaaacc atcagagcca ttgccgatct
     101  caagccactc tccgttgaac ggttaagttt ccattgatac tcgaaagatg
     151  tcagcaccag ctagcacaac acaggccaca gggtcaacta cctcaactac
     201  cacaaaaact gcaggcgcaa ctcctgccac agcttcagga ctgttcacca
     251  tcccggatgg ggatttcttt agtacagccc gtgctatagt agccagcaat
     301  gccgttgcaa caaatgagga cctctgcaag attgaggcta tctggaagga
     351  catgaaggtg cccacagaca ctatggcaca ggctgcttgg gacttagtca
     401  gacactgcgc tgatgtgggc tcatctgctc aaacagaaat gatagacaca
     451  ggtccctatt ccaacggcat cagcagagcc agactggcag cagcaattaa
     501  agaggtgtgc acacttaggc aattttgcat gaagtatgct ccagtggtat
     551  ggaactggat gctgactaac aacagtccac ctgctaactg gcaagcacaa
     601  ggtttcaagc ctgagcacaa attcgctgca ttcgacttct ttaatggagt
     651  caccaaccca gctgccatca tgcccaaaga ggggctcatc cggccaccgt
     701  ctgaagctga aatgaatgct gcccaaactg ctgcctttgt gaagattacg
     751  aaggccaggg cacaatccaa cgactttgcc agcctagatg cagctgttac
     801  tcgaggtcgt atcactggaa caacaaccgc tgaggctgtt gtcactctcc
     851  caccaccata actacgtcta cataaccgac gcctacccca gtttcatagt
     901  attttctggt ttgattgtat gaaacc