Sequence of DPV Tomato yellow leaf curl China virus

Tomato yellow leaf curl China virus clone SC65-8 AV2 protein (AV2) gene, complete cds; and coat protein (AV1) gene, partial cds.

ACC No: GU199591

Dated: 2009-12-16 | Length: 519 | CRC: 625773036

                
ID   GU199591; SV 1; linear; genomic DNA; STD; VRL; 519 BP.
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AC   GU199591;
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DT   16-DEC-2009 (Rel. 103, Created)
DT   16-DEC-2009 (Rel. 103, Last updated, Version 1)
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DE   Tomato yellow leaf curl China virus clone SC65-8 AV2 protein (AV2) gene,
DE   complete cds; and coat protein (AV1) gene, partial cds.
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KW   .
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OS   Tomato yellow leaf curl China virus
OC   Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
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RN   [1]
RP   1-519
RA   Xiong Y., Qing L.;
RT   "Molecular characterization and variation of Tomato yellow leaf curl China
RT   virus on tomato in Sichuan Province";
RL   Unpublished.
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RN   [2]
RP   1-519
RA   Xiong Y., Qing L.;
RT   ;
RL   Submitted (12-NOV-2009) to the EMBL/GenBank/DDBJ databases.
RL   Plant Pathology, College of Plant Protection, Tiansheng Road 2, Chongqing
RL   400716, China
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FH   Key             Location/Qualifiers
FH
FT   source          1. .519
FT                   /organism="Tomato yellow leaf curl China virus"
FT                   /host="tomato"
FT                   /isolate="SC65"
FT                   /mol_type="genomic DNA"
FT                   /country="China"
FT                   /collection_date="12-Aug-2009"
FT                   /clone="SC65-8"
FT                   /note="PCR_primers=fwd_name: PA, rev_name: PB"
FT                   /db_xref="taxon:185793"
FT   gene            136. .483
FT                   /gene="AV2"
FT   CDS             136. .483
FT                   /codon_start=1
FT                   /gene="AV2"
FT                   /product="AV2 protein"
FT                   /protein_id="ACZ71249.1"
FT                   /translation="MWDPLLNEFPDTVHGFRCMLAIKYLQLVENTYSPDTLGHDLIRDL
FT                   ILVIRARDYGEASRRYTHFHSRLEGASPAELRQPIHGACCCPHCPRHQKANVVKQTHVS
FT                   EAHDVPDVQKP"
FT   gene            296. .>519
FT                   /gene="AV1"
FT   CDS             296. .>519
FT                   /codon_start=1
FT                   /gene="AV1"
FT                   /product="coat protein"
FT                   /protein_id="ACZ71250.1"
FT                   /translation="MAKRPADILISTPASKVRRRLNFDSPYMGRAAVPTVRVTRKQMWS
FT                   NRPMYRKPMMYRMYRSPDVPRGCEGPCKV"
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SQ   Sequence 519 BP; 134 A; 130 C; 108 G; 147 T; 0 other;

gu199591 Length: 519  16-DEC-2009  Type: N  Check: 6969  ..

       1  taatattacc tgttggccgc gcgatttttt tagcgtggtc cccatgggca
      51  tatatgtcca atcatatccg ctcctcaaag cttaattatt taatggtcca
     101  ctataaaact tagcccccaa gtattcacgt taaacatgtg ggatcctcta
     151  ctcaacgagt tccctgatac tgtacatggc tttagatgca tgctagcaat
     201  taagtatttg caattagttg aaaatactta ctctcccgac acattaggtc
     251  acgatttaat acgtgattta attttagtta tacgtgctag agattatggc
     301  gaagcgtccc gccgatatac tcatttccac tcccgcctcg aaggtgcgtc
     351  gccggctgaa cttcgacagc ccatacatgg ggcgtgctgc tgtccccact
     401  gtccgcgtca ccagaaagca aatgtggtca aacagaccca tgtatcggaa
     451  gcccatgatg taccggatgt acagaagccc tgatgttcct agaggttgtg
     501  aaggcccttg taaagtcca