Sequence of DPV Cymbidium mosaic virus

Cymbidium mosaic virus isolate SCJJC7 coat protein gene, complete cds.

ACC No: GU295168

Dated: 2011-01-02 | Length: 672 | CRC: 145078211

                
ID   GU295168; SV 1; linear; genomic RNA; STD; VRL; 672 BP.
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AC   GU295168;
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DT   02-JAN-2011 (Rel. 107, Created)
DT   02-JAN-2011 (Rel. 107, Last updated, Version 1)
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DE   Cymbidium mosaic virus isolate SCJJC7 coat protein gene, complete cds.
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KW   .
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OS   Cymbidium mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Tymovirales;
OC   Alphaflexiviridae; Potexvirus.
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RN   [1]
RP   1-672
RA   Wang T.;
RT   "Analysis of sequence variability of coat protein gene of Cymbidium mosaic
RT   virus";
RL   Unpublished.
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RN   [2]
RP   1-672
RA   Wang T.;
RT   ;
RL   Submitted (10-DEC-2009) to the EMBL/GenBank/DDBJ databases.
RL   Chinese Academy of Forestry, Research Institute of Forestry, Beijing
RL   100091, China
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FH   Key             Location/Qualifiers
FH
FT   source          1. .672
FT                   /organism="Cymbidium mosaic virus"
FT                   /host="Cymbidium ensifolium"
FT                   /isolate="SCJJC7"
FT                   /mol_type="genomic RNA"
FT                   /country="China:Sichuan"
FT                   /collection_date="Sep-2009"
FT                   /db_xref="taxon:12178"
FT   CDS             1. .672
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /note="cp"
FT                   /protein_id="ADR51234.1"
FT                   /translation="MGEPTPTPAATYSAADPTSAPKLADLAAIKYSPVTSSIATPEEIK
FT                   AITQLWVNNLGLPADTVGTAAIDLARAYADVRASKSATLLGFCPTKPDVRRAALAAQIF
FT                   VANVTPRQFCAYYAKVVWNLMLATNDPPANWAKAGFQEDTRFAAFDFFDAVDSTAALEP
FT                   AEWQRRPTDRERAAHSIGKYGALARQRIQNGNLITNIAEVTKGHLGSTNTLYALPAPPT
FT                   E"
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SQ   Sequence 672 BP; 129 A; 245 C; 160 G; 138 T; 0 other;

gu295168 Length: 672  02-JAN-2011  Type: N  Check: 2639  ..

       1  atgggagagc ccactccaac tccagctgcc acttactccg ctgccgaccc
      51  cacttctgca cccaagttgg ccgacctggc tgccattaag tactcgcctg
     101  tcacctcctc catcgccacc cccgaggaaa tcaaggccat aacccaattg
     151  tgggttaaca accttggcct ccccgctgac accgtaggta ccgcggccat
     201  tgacctggcc cgcgcctatg ctgacgtcag ggcgtccaag agtgctaccc
     251  tgctcggttt ctgccctacg aaacctgatg tccgccgcgc cgctcttgcc
     301  gcgcagatct tcgtggccaa cgtcaccccc cgccagtttt gcgcttacta
     351  cgcaaaagtg gtgtggaatc tgatgctggc cactaacgat ccgcccgcca
     401  actgggccaa ggctggtttc caggaggata cccggtttgc cgcctttgac
     451  ttcttcgatg ccgtcgattc cactgccgcg ctggagcctg ctgaatggca
     501  gcgccgccct actgaccgag aacgtgctgc gcactcgatc gggaagtacg
     551  gcgcccttgc ccgtcagcgt atccaaaacg gcaacctcat caccaacatt
     601  gccgaggtca ccaagggcca tcttggctcc actaacaccc tctatgctct
     651  gcctgcacct cctactgaat aa