Sequence of DPV Cotton leaf curl Kokhran virus

Cotton leaf curl Kokhran virus clone jit-1 coat protein (CP) gene, complete cds.

ACC No: GU385878

Dated: 2010-06-29 | Length: 854 | CRC: 1392343545

                
ID   GU385878; SV 1; linear; genomic DNA; STD; VRL; 854 BP.
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AC   GU385878;
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DT   01-MAR-2010 (Rel. 104, Created)
DT   29-JUN-2010 (Rel. 105, Last updated, Version 2)
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DE   Cotton leaf curl Kokhran virus clone jit-1 coat protein (CP) gene, complete
DE   cds.
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KW   .
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OS   Cotton leaf curl Kokhran virus
OC   Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
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RN   [1]
RP   1-854
RX   PUBMED; 20405195.
RA   Kumar J., Kumar A., Roy J.K., Tuli R., Khan J.A.;
RT   "Identification and molecular characterization of begomovirus and
RT   associated satellite DNA molecules infecting Cyamopsis tetragonoloba";
RL   Virus Genes 41(1):118-125(2010).
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RN   [2]
RP   1-854
RA   Kumar J., Kumar A., Khan J.A.;
RT   "Molecular characterization of Cotton leaf curl virus infecting Cyamopsis
RT   tetragonolobus";
RL   Unpublished.
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RN   [3]
RP   1-854
RA   Kumar J., Kumar A., Khan J.A.;
RT   ;
RL   Submitted (04-JAN-2010) to the EMBL/GenBank/DDBJ databases.
RL   Molecular Virology Lab, National Botanical Research Institute, Rana Pratap
RL   Marg, Lucknow, Uttar Pradesh 226001, India
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FH   Key             Location/Qualifiers
FH
FT   source          1. .854
FT                   /organism="Cotton leaf curl Kokhran virus"
FT                   /host="cotton"
FT                   /isolate="Lucknow"
FT                   /mol_type="genomic DNA"
FT                   /country="India"
FT                   /isolation_source="leaf"
FT                   /clone="jit-1"
FT                   /db_xref="taxon:222464"
FT   gene            34. .804
FT                   /gene="CP"
FT   CDS             34. .804
FT                   /codon_start=1
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /note="involved in encapsidation"
FT                   /db_xref="GOA:D3Y1N0"
FT                   /db_xref="UniProtKB/TrEMBL:D3Y1N0"
FT                   /protein_id="ADC96618.1"
FT                   /translation="MSKRPADIIISTPASKVRRRLNFDSPYVSRAAAPIVRVTKAKAWA
FT                   NRPMNRKPRMYRMYRSPDVPRGCEGPCKVQSFESRHDIQHIGKVMCVSDVTRGTGLTHR
FT                   VGKRFCVKSVYVLGKIWMDENIKTKNHTNSVMFFLVRDRRPVDKPQDFGEVFNMFDNEP
FT                   STATVKNVHRDRYQVLRKWYATVTGGQYASKEQALVKKFIRVNNYVVYNQQEAGKYENH
FT                   SENALMLYTACTHASNPVYATLKIRIYFYDSVTN"
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SQ   Sequence 854 BP; 250 A; 154 C; 208 G; 242 T; 0 other;

gu385878 Length: 854  29-JUN-2010  Type: N  Check: 8258  ..

       1  gggatttgat ttcagtaata agggccagga attatgtcga agcgaccagc
      51  agatataatc atttccacgc ccgcttcgaa ggtacgtcgc cgtctcaact
     101  tcgacagccc atatgtgagc cgtgctgctg cccccattgt ccgcgtcacc
     151  aaagcaaaag catgggcgaa caggcccatg aacagaaagc ccaggatgta
     201  caggatgtac agaagtccag atgttcctag aggatgtgaa ggtccatgta
     251  aggttcagtc gtttgagtcc agacatgata ttcagcatat aggtaaagtc
     301  atgtgtgtta gtgatgttac tcgtggtact gggcttaccc atagagttgg
     351  taagagattt tgtgttaagt ctgtttatgt gttgggtaag atatggatgg
     401  atgagaacat taagaccaag aatcacacga atagtgtgat gtttttctta
     451  gttagagatc gtagacctgt tgataaacct caagattttg gagaggtgtt
     501  taacatgttt gataatgagc ccagtacggc gactgtgaag aatgttcatc
     551  gtgataggta tcaagtgctg cgcaaatggt atgcaactgt caccggtgga
     601  caatacgctt caaaggaaca agctctcgtg aagaagttta ttagagttaa
     651  taattatgtt gtgtataacc agcaagaagc tggcaagtat gagaatcatt
     701  ctgagaacgc tttaatgttg tatacggcgt gtactcacgc ctctaaccca
     751  gtgtatgcta ccttgaagat acggatctac ttctatgatt ccgtgacaaa
     801  ttaataaata ttgaatttta ttgaagatga ttggtctaca tatacaacat
     851  gctc