Sequence of DPV Okra yellow mosaic Mexico virus
Okra yellow mosaic Mexico virus isolate Mezatepec 3 segment B, complete sequence.
ACC No: GU972604
Dated: 2010-04-27 | Length: 2582 | CRC: -756392880
ID GU972604; SV 1; circular; genomic DNA; STD; VRL; 2582 BP.
XX
AC GU972604;
XX
DT 27-APR-2010 (Rel. 104, Created)
DT 27-APR-2010 (Rel. 104, Last updated, Version 1)
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DE Okra yellow mosaic Mexico virus isolate Mezatepec 3 segment B, complete
DE sequence.
XX
KW .
XX
OS Okra yellow mosaic Mexico virus
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus;
OC unclassified Begomovirus.
XX
RN [1]
RP 1-2582
RA De la Torre-Almaraz R., Monsalvo-Reyes A., Ambriz-Granados S.,
RA Mauricio-Castillo J.A., Arguello-Astorga G.R.;
RT "A new okra-infecting begomovirus from Mexico with unique iterons is
RT related to Chino del tomate virus";
RL Unpublished.
XX
RN [2]
RP 1-2582
RA Mauricio-Castillo J.A., De la Torre-Almaraz R., Arguello-Astorga G.R.;
RT ;
RL Submitted (04-MAR-2010) to the EMBL/GenBank/DDBJ databases.
RL Molecular Biology, Instituto Potosino de Investigacion Cientifica y
RL Tecnologica, A.C., Camino a la presa san jose 2055, San Luis Potosi, S.L.P.
RL 78216, Mexico
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FH Key Location/Qualifiers
FH
FT source 1. .2582
FT /organism="Okra yellow mosaic Mexico virus"
FT /segment="B"
FT /host="Abelmoschus esculentus (L.) Moench"
FT /isolate="Mezatepec 3"
FT /mol_type="genomic DNA"
FT /country="Mexico"
FT /collection_date="10-May-2005"
FT /db_xref="taxon:327280"
FT CDS 441. .1211
FT /codon_start=1
FT /product="BV1 protein"
FT /note="nucleus-cytoplasm ssDNA transporter; NSP"
FT /protein_id="ADF45476.1"
FT /translation="MYPYKYKRGASFAARRFYSRNQVFKRSTISRRDDGKRRPVNSNKP
FT SDEPKMSTQRLHENQYGTEFTMAHNSAIPTYISYPNLGKTQPNRSRSYIKLKRLRFKGT
FT VKIERVPTDVAMDGTTPNTEGVFSLVIVVDRKPHLTAAGCLHTFDELFGAIIHSHGTLS
FT IVPALKDRYYIRHVFKRVLSVEKDNVMVDIEGSTALSNRRFNCWASFKDLDLDSCKGVY
FT DNINKNALLVYYSWVSDTVSKASSYVSFDLDYIG"
FT CDS complement(1249. .2130)
FT /codon_start=1
FT /product="BC1 protein"
FT /note="protein movement; plasmodesmata modifier;
FT cell-to-cell movement; MP"
FT /protein_id="ADF45477.1"
FT /translation="MDSQLVNPPNAFNYIESHRDEYQLSHDLTEIVLQFPSTASQLTAR
FT LSRSCMKIDHCVIEYRQQVPINATGTVIVEIHDKRMTDNESLQASWTFPIRCNIDLHYF
FT SASFFSLKDPIPWKLYYRVCDTNVHQRTHFAKFKGKLKLSTAKHSVDIPFRAPTVKILS
FT KQFTDKDVDFSHVDYGRWERKPIRCASMSRVGLRGPIEIRPGESWASRSAVGTGHSDAD
FT SEVGNELHPYRHLSRLGTSVLDPGESASIVGAQRAESNITMSIAQLNELVRTTVQECIK
FT SSCNAPQPKIFK"
XX
SQ Sequence 2582 BP; 652 A; 577 C; 594 G; 759 T; 0 other;
gu972604 Length: 2582 27-APR-2010 Type: N Check: 4077 ..
1 accggatggc cgcgcgattt tttacccccc ctcgtgcgta atcgcgcgct
51 ccctccctgg tggcccccct ccccgctcct ggtgtccccc tgtacgtggc
101 cactcgttac tgtctcactc tctgtacaat gggccatgtt gtcggtgaat
151 tattgttgac tgacccttta attcaaatta aaggttaact cttttatgcc
201 gcgcgatatc aattcaaatt tgaattattg attcgcgttt cttgagtgtg
251 tcccattgta cttcatggtc gacgtggacg atttgagacc atgctgctga
301 gtcaagttaa gctcttcttt gaataatcct tttctatata ttgggcccga
351 atcatatatg atagtcgaag tgactcagca gtccaccacg tttatttgaa
401 tagctatatt gatcgtataa tcacgtgtta gtctttgatt atgtatcctt
451 ataagtataa acgtggtgcg tcattcgctg cacgacgatt ttattcacgt
501 aatcaggtgt tcaagcgttc aaccatctcc agacgagatg acgggaaacg
551 aaggccggtt aattcaaata agccaagtga tgagccgaag atgtcaaccc
601 aacgcctgca cgagaatcaa tatggcacag aatttacaat ggcccataat
651 tctgccattc caacctatat ctcatatcct aatctgggta agacgcaacc
701 caatcgatcc aggtcgtata tcaagctgaa acgcctacgt ttcaaaggaa
751 ctgttaagat cgagcgtgtt cctactgacg tggcgatgga cggtactact
801 cccaatacag agggagtgtt ctcattggtc attgtcgttg accgaaaacc
851 tcatttgact gcagctggat gcctacacac gttcgacgag ctgttcggtg
901 ccataatcca cagccatgga accttgtcta tagttcccgc attgaaggat
951 cgttactaca tacggcatgt atttaaacgg gtactgtccg tcgagaagga
1001 taacgtaatg gtggatattg aaggatccac tgctctctct aacaggcgtt
1051 ttaattgttg ggctagtttt aaagatctcg acttggattc gtgtaagggt
1101 gtttatgaca acataaacaa gaacgccctg ttagtttatt attcatgggt
1151 ctctgatact gtgtctaaag catccagtta tgtatcgttc gaccttgatt
1201 atattggata atcaataata acaagtaatt tgtaaataat aaatcttatt
1251 atttgaatat ttttggttga ggtgcattac aactactctt gatacattct
1301 tggaccgtag tccttactag ttcgtttaat tgggctatgg acatggtaat
1351 gttggattcc gctctctggg cccccacaat cgaagcagac tctcccgggt
1401 ctaacacgct ggtccccagc cgacttaggt gcctgtaagg gtggagctcg
1451 ttccccacct ctgagtccgc atctgaatgc cccgtcccca ccgcactcct
1501 ggaagcccat gactcaccag gccttatttc aattgggcct ctgagcccaa
1551 ccctggacat ggatgcgcat ctgatgggct tcctttccca tcttccgtag
1601 tcgacgtgcg aaaagtcgac atccttgtcg gtgaactgtt tggaaaggat
1651 cttcactgtc ggtgcccgga aagggatatc cacggaatgt ttcgccgtcg
1701 acagtttcag tttccctttg aatttcgcga agtgggttct ctgatgaaca
1751 ttcgtatcgc agactctgta gtagagtttc catggaattg ggtccttcaa
1801 cgagaagaac gaagcggaaa agtagtggag atctatgttg cacctgatcg
1851 gaaaagtcca cgacgcctgc agagattcgt tgtccgtcat ccttttgtcg
1901 tggatctcca ctatcaccgt ccccgtggcg ttaatcggta cctgctgcct
1951 gtattctatg acgcagtggt cgattttcat gcagctccgg ctaagcctcg
2001 ccgtcaactg agacgccgtc gatgggaatt gcagaactat ctcggtcaga
2051 tcatgggaaa gctgatactc gtcccggtgg gactctatgt aattgaaggc
2101 gttcggagga tttactaact gagaatccat atgaagaaga aaggccgcgc
2151 agcggcactg attgctgaag ttgaacggct gacgaagaaa ttagggtttg
2201 tttgggaaaa cactcgatga acaactgttg aagatgaaga agattttctg
2251 ggtttcccag aatttagctg aagaacggaa gaacagtcgt ttagtttttc
2301 ttgaatatat gaattgtttt tgagaaagag gagaattctg ggaatatttt
2351 gaagatgata atggtttaga tctcttagtc tttatataga acctcagtac
2401 tctgttttga tatcgttcgg gagaagtttg tgtctaggcg gtggcatatt
2451 tgtaaataag agagtgtgta ccaattgagc tctctctaaa cttagcaaat
2501 gaattggtac acaggtacac aatatatagt agaaccctca ttaacggatt
2551 tgcaacacgt ggcggccatc cgctataata tt