Sequence of DPV Tomato leaf curl Ghana virus
Tomato leaf curl Togo virus - Fontem complete sequence, isolate TFB2
ACC No: HE659517
Dated: 2013-01-07 | Length: 2794 | CRC: 1906022927
ID HE659517; SV 1; circular; genomic DNA; STD; VRL; 2794 BP.
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AC HE659517;
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DT 07-JAN-2013 (Rel. 115, Created)
DT 07-JAN-2013 (Rel. 115, Last updated, Version 1)
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DE Tomato leaf curl Togo virus - Fontem complete sequence, isolate TFB2
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KW complete genome.
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OS Tomato leaf curl Togo virus - Fontem
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus;
OC unclassified Begomovirus.
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RN [1]
RP 1-2794
RA Leke W.N.;
RT ;
RL Submitted (29-JAN-2012) to the INSDC.
RL Leke W.N., Institute of Agricultural Research for Development (IRAD),
RL Annual Crops, Box 2123 Messa, Yaounde, CAMEROON.
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RN [2]
RA Nkeabeng L.W., Noe W.;
RT "First report of mixed infection of two newly identified West African
RT tomato infecting begomoviruses infecting tomato in Cameroon";
RL Unpublished.
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FH Key Location/Qualifiers
FH
FT source 1. .2794
FT /organism="Tomato leaf curl Togo virus - Fontem"
FT /host="Solanum lycopersicum"
FT /isolate="TFB2"
FT /mol_type="genomic DNA"
FT /country="Cameroon:South West-Fontem"
FT /collected_by="Leke Walter"
FT /identified_by="Leke Walter"
FT /db_xref="taxon:1141723"
FT CDS 166. .516
FT /gene="V2"
FT /product="pre-coat protein"
FT /protein_id="CCF77730.1"
FT /translation="MWDPLLNEFPDSVHGFRCMLGIKYLQLLEEEYEPNTLGHDLVRDL
FT ISVVRAKNYVEATRRYNNFHARLEGASTAELRQPLRQPCCCPHCPRHKQASFVDVPAHV
FT SQAKNVQDVQNS"
FT CDS complement(311. .637)
FT /gene="C5"
FT /product="hypothetical protein"
FT /protein_id="CCF77731.1"
FT /translation="MSQTRPTGHITNTTNYTHMLDIIPLLVRLDLTWAFTATGNVRSSV
FT HPVHSWLAIHGPVRPRTTLACASDSGDNSTAGVGAVEVQPSTHLRDGRGNYYIAGSLRH
FT NSWP"
FT CDS 326. .1099
FT /gene="V1"
FT /product="coat protein"
FT /protein_id="CCF77732.1"
FT /translation="MSKRPGDIIISTPVSKVRRRLNFDSPYASRAVVPTVRGTSKRRSW
FT TYRPMYRKPRMYRMYRTPDIPRGCEGPCKVQSYEQRDDVKHVGIVRCVSDVTRGSGLTH
FT RVGKRFCIKSIYILGKVWMDENIKKQNHTNNVMFFLVRDRRPYGSPSDFGQIFNMFDNE
FT PSTATIKNDLRDRYQVLRKFSATVIGGPSGCKEQALVKRFFKLNNHVVYNHQEEAKYAN
FT HTENALLLYMACTHASNPVYATLKIRIYFYDAVTN"
FT CDS complement(743. .1033)
FT /gene="C5"
FT /product="hypothetical protein"
FT /protein_id="CCF77733.1"
FT /translation="MSTSHIQQQSILSMVGIFSLLLMIINDMIVKFKKSLHQSLFLASG
FT GTTNNSCTEFTQNLITVSEIILDCSCTGFVVEHVKNLSKITRTAIRPPITD"
FT CDS complement(1096. .1500)
FT /gene="C3"
FT /product="replication enhancement protein"
FT /protein_id="CCF77734.1"
FT /translation="MDSRTGELITAHQAWNGVFIWEIQNPLYFKITNHDERPFNYQHDI
FT ITVQIRFNHNLRKALGIHKCFLNFKIWTSLRPQTGRFLRVFRFQVLKYLDNLGVISINA
FT IIRAVDHVLYNVLESTIYVLEKHEIKFNIY"
FT CDS complement(1241. .1648)
FT /gene="C2"
FT /product="transcriptional activation protein"
FT /protein_id="CCF77735.1"
FT /translation="MRPSSPSTSHCTQVPIKVQHRIAKKKLVRRKRVDLECGCSYFIHI
FT NCSNHGFTHRGTHHCASSLEWRFYLGDTKSPVFQDNQPRREAVQLPTRHNNSTNQVQPQ
FT PAEGVGDSQVFSELQDLDELTPSDWSFLKGI"
FT CDS complement(1557. .2636)
FT /gene="C1"
FT /product="replication associated protein"
FT /protein_id="CCF77736.1"
FT /translation="MAPPKRFKICAKNYFLTYPKCSLSKEEALEQLQAIQTPTNKKYIK
FT ICRELHENGEPHIHVLLQFEGKYQCTNNRFFDLVSPTRSAHFHPNIQGAKSSSDVKSYI
FT DKDGDTLEWGEFQIDGRSARGGQQTANDAYARAINSGSKQEALNLLKELAPRDFVYGFH
FT NLNSNLDRIFQAPPEVYISPFLSSSFNQVPEELEEWVSENVMGAAARPWRPISIVIEGD
FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDW
FT QSNTKYGKPIQIKGGIPTIFLCNPGPTSSYKEYLDEEKNTSLKAWAIKNATFVTLHEPL
FT YSSADQSPAPHSEEETSET"
FT CDS complement(2177. .2479)
FT /gene="C4"
FT /product="hypothetical protein"
FT /protein_id="CCF77737.1"
FT /translation="MASLISTCFSSSKANTSAQITDSSTWYPQPGQHISIRTFRELNPA
FT PTSSPISTKTATPSNGESFRSMDDLQEGVNKQPMMLTPEQLTQEVNKRLLIYLRN"
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SQ Sequence 2794 BP; 739 A; 561 C; 624 G; 870 T; 0 other;
he659517 Length: 2794 07-JAN-2013 Type: N Check: 195 ..
1 accggatggc cgcgattttt tttccttaca cgctccaaag caaaagtaaa
51 gtaatcagtg gaccccgtgc actagtttat gttggccaat catatcgcag
101 cctgaaaggc tagataatac attttgtcct tatatacttc cgctccaagt
151 tgtcgttatt gcaacatgtg ggatccatta ttgaacgagt tcccggactc
201 agttcatggg tttcgttgta tgctgggtat aaaatatctg cagcttttag
251 aggaggagta cgagcccaat actttgggcc acgatttagt tagagatctc
301 atttctgtcg ttagggccaa gaattatgtc gaagcgaccc ggcgatataa
351 taatttccac gcccgtctcg aaggtgcgtc gacggctgaa cttcgacagc
401 ccctacgcca gccgtgctgt tgtccccact gtccgaggca caagcaagcg
451 tcgttcgtgg acgtaccggc ccatgtatcg caagccaaga atgtacagga
501 tgtacagaac tcctgacatt ccccgtggct gtgaaggccc atgtaaggtc
551 cagtcttacg agcagaggga tgatgtcaag catgtgggta tagttcgttg
601 tgttagtgat gtgacccgtg ggtctggtct gactcataga gtagggaaga
651 gattttgcat taagtctatt tacattttag gtaaagtctg gatggacgaa
701 aatatcaaga agcagaatca tactaacaat gttatgtttt ttttagtccg
751 tgatcggagg ccttatggca gtcctagtga ttttggacag atttttaaca
801 tgttcgacaa cgaacccagt acagctacaa tcaagaatga tctcagagac
851 cgttatcaag ttctgcgtaa attcagtgca actgttattg gtggtccctc
901 cggatgcaag gaacaggctt tggtgaagag attttttaaa cttaacaatc
951 atgtcgttta taatcatcag gaggaggcta aatatgccaa ccatactgag
1001 aatgctttgt tgttgtatat ggcttgtact catgcctcta accctgtgta
1051 tgctactctg aaaatacgca tctatttcta cgatgcagtt acgaattaat
1101 aaatattaaa ttttatttca tgtttttcta atacatagat tgtactttca
1151 agtacgttgt acaatacatg atcaactgct ctaataattg cattaattga
1201 aattacaccc aaattatcta gatactttaa cacctgaaac ctaaataccc
1251 ttaagaaacg accagtctga gggcgtaagc tcgtccagat cttgaagttc
1301 agaaaacact tgtgaatccc caacgccttc cgcaggttgt ggttgaacct
1351 gatttgtact gttattatgt cgtgttggta attgaacggc ctctcgtcgt
1401 ggttggttat cttgaaatac aggggatttt gtatctccca gataaaaacg
1451 ccattccaag cttgatgcgc agtgatgagt tcccctgtgc gtgaatccat
1501 gattactgca gttaatatgt atgaagtatg aacaaccgca ctctaagtcc
1551 acccttttac gtctcactag tttcttcttc gctatgcggt gctggacttt
1601 gatcggcact tgagtacaat ggctcgtgga gggtgacgaa ggtcgcattt
1651 tttatagccc aggcttttag tgatgtattc ttttcctcgt ccagatattc
1701 tttatatgat gatgttggac ctggattgca gaggaagata gtgggaattc
1751 cacctttaat ttgaatgggc ttcccgtact tggtgttgct ttgccagtct
1801 ctttgggccc ccataaactc tttaaagtgt ttgagatagt ggggatcgac
1851 gtcatcaatg acgttatacc aagcatcgtt tgaatacacc tttggactca
1901 gatctagatg cccacacaag taattgtgtg gacctaatga tctggcccac
1951 attgtcttgc ctgtacgact atcaccttca ataactatac ttatgggtct
2001 ccatggccgc gcagcggcac ccatgacgtt ctcagaaacc cattcttcaa
2051 gttcttcggg aacttgatta aaagaagaag ataaaaaagg agaaatatac
2101 acttcaggcg gagcctgaaa aatcctatct aaattactgt ttaaattatg
2151 aaaaccataa acaaaatctc taggagctag ttccttaagt aaattaagag
2201 cctcttgttt acttcctgag ttaattgctc tggcgtaagc atcattggct
2251 gtttgttgac cccctcttgc agatcgtcca tcgatctgaa actctcccca
2301 ttcgagggtg tcgccgtctt tgtcgatata ggacttgacg tcggagctgg
2351 atttagctcc ctgaatgttc ggatggaaat gtgctgaccg ggttggggat
2401 accaagtcga agaatctgtt atttgtgcac tggtatttgc cttcgaactg
2451 gagaagcacg tggatatgag gctcgccatt ttcgtgaagt tctctgcaga
2501 ttttgatata ttttttattt gttggtgttt gaatagcctg aagttgttcg
2551 agtgcttcct cttttgatag agagcatttg gggtatgtga gaaaataatt
2601 ctttgcacat attttaaagc gttttggagg tgccatttgg tcaatgtact
2651 ccgattgacc agttatttca tttgacgcct gcaatcggag taatggagta
2701 caatatatag tgaggggtgt aatggcataa atgtaattag ataaaagtaa
2751 tatgctttaa tttgaattgg taaagcggcc atccgtataa tatt