Sequence of DPV Rice yellow mottle virus

Rice yellow mottle virus ORF1 gene for P1 protein, genomic RNA, isolate Ma210

ACC No: HE795653

Dated: 2013-05-22 | Length: 474 | CRC: -690526766

                
ID   HE795653; SV 1; linear; genomic RNA; STD; VRL; 474 BP.
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AC   HE795653;
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DT   22-MAY-2013 (Rel. 116, Created)
DT   22-MAY-2013 (Rel. 116, Last updated, Version 1)
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DE   Rice yellow mottle virus ORF1 gene for P1 protein, genomic RNA, isolate
DE   Ma210
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KW   .
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OS   Rice yellow mottle virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Sobemovirus.
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RN   [1]
RP   1-474
RA   Sereme D.;
RT   ;
RL   Submitted (22-MAR-2012) to the INSDC.
RL   INERA, Production Vegetale, BP 476 Ouagadougou 01, 01, BURKINA FASO.
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RN   [2]
RA   Sereme D., Lacombe S., Konate M., Bangratz M., Pinel-Galzi A., Fargette D.,
RA   Traore A.S., Konate G., Brugidou C.;
RT   "Sites under positive selection in the RNA silencing modulate the
RT   suppressor activity of Rice yellow mottle virus movement protein P1";
RL   Unpublished.
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FH   Key             Location/Qualifiers
FH
FT   source          1. .474
FT                   /organism="Rice yellow mottle virus"
FT                   /isolate="Ma210"
FT                   /serotype="Ser-sa"
FT                   /mol_type="genomic RNA"
FT                   /country="Mali"
FT                   /db_xref="taxon:31744"
FT   CDS             1. .474
FT                   /transl_table=1
FT                   /gene="ORF1"
FT                   /product="P1 protein"
FT                   /function="putative movement and gene silencing
FT                   suppression"
FT                   /protein_id="CCG97793.1"
FT                   /translation="MTRLEVLIRPTERTAAKANNVGYTHALTWVWHSQTWDVDAVSDPV
FT                   LSGDFNPDKVGWVSVSFACTQCTAHYFTGEQVKYFTNIPSVHYDVVCADCERRVQLDDE
FT                   VDREHQERNAEISACNARALSEGRPASLVYLSRDACDIPEHSETCRFDKYLNF"
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SQ   Sequence 474 BP; 103 A; 121 C; 136 G; 114 T; 0 other;

he795653 Length: 474  22-MAY-2013  Type: N  Check: 899  ..

       1  atgacacggt tggaagttct tatacgaccg actgagcgaa ctgcggcaaa
      51  agccaacaac gtgggctata cgcacgcact cacctgggtt tggcattctc
     101  agacctggga cgttgacgct gtgagcgatc cagttctcag tggcgacttc
     151  aaccctgata aggttggttg ggtgtctgtg tcatttgcct gtactcagtg
     201  cacggctcac tactttactg gtgagcaggt gaaatatttc accaacatcc
     251  cgtcggttca ttacgacgtg gtgtgtgctg attgcgagcg acgtgttcag
     301  ctggacgacg aggtcgaccg ggaacaccaa gagcgtaacg cagagatttc
     351  tgcctgcaac gctcgggccc tgagtgaagg gaggccagcc agtctggtgt
     401  acctctctcg ggacgcttgc gatatacctg agcactccga gacgtgtcgg
     451  tttgataagt acctcaactt ctga