Sequence of DPV Rice yellow mottle virus

Rice yellow mottle virus ORF1 gene for P1 protein, genomic RNA, isolate CI115

ACC No: HE795664

Dated: 2013-05-22 | Length: 474 | CRC: 196009893

                
ID   HE795664; SV 1; linear; genomic RNA; STD; VRL; 474 BP.
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AC   HE795664;
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DT   22-MAY-2013 (Rel. 116, Created)
DT   22-MAY-2013 (Rel. 116, Last updated, Version 1)
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DE   Rice yellow mottle virus ORF1 gene for P1 protein, genomic RNA, isolate
DE   CI115
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KW   .
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OS   Rice yellow mottle virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Sobemovirus.
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RN   [1]
RP   1-474
RA   Sereme D.;
RT   ;
RL   Submitted (22-MAR-2012) to the INSDC.
RL   INERA, Production Vegetale, BP 476 Ouagadougou 01, 01, BURKINA FASO.
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RN   [2]
RA   Sereme D., Lacombe S., Konate M., Bangratz M., Pinel-Galzi A., Fargette D.,
RA   Traore A.S., Konate G., Brugidou C.;
RT   "Sites under positive selection in the RNA silencing modulate the
RT   suppressor activity of Rice yellow mottle virus movement protein P1";
RL   Unpublished.
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FH   Key             Location/Qualifiers
FH
FT   source          1. .474
FT                   /organism="Rice yellow mottle virus"
FT                   /isolate="CI115"
FT                   /serotype="Ser2"
FT                   /mol_type="genomic RNA"
FT                   /country="Cote d'Ivoire"
FT                   /db_xref="taxon:31744"
FT   CDS             1. .474
FT                   /transl_table=1
FT                   /gene="ORF1"
FT                   /product="P1 protein"
FT                   /function="putative movement and gene silencing
FT                   suppression"
FT                   /protein_id="CCG97804.1"
FT                   /translation="MTRLEVLIRPTQQTVAKAIAAGYTHALTWVWHSQTWDVDAVNDPV
FT                   LSADFNPAKVGWVSVSFACTQCTAHYYTSEQVKCFTNIPPVHYDVVCADCERSVQQDDQ
FT                   IDREHDERNAEISACNARALSEGRPASLVYLSRDACDIPEHSGTCRFDKYLNF"
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SQ   Sequence 474 BP; 104 A; 131 C; 133 G; 106 T; 0 other;

he795664 Length: 474  22-MAY-2013  Type: N  Check: 7351  ..

       1  atgacacggt tggaagttct tatacgaccg actcagcaga ctgtggcaaa
      51  agccattgcc gcgggctata cgcacgcact cacctgggtt tggcattctc
     101  agacctggga cgttgacgca gtgaacgatc cagttctcag cgccgacttc
     151  aaccctgcaa aggttggctg ggtgtcagtg tcgtttgcct gtactcagtg
     201  cacagctcac tactacacga gtgagcaggt gaagtgtttc accaacatcc
     251  cgcctgtcca ctacgacgtg gtgtgtgctg attgcgagcg cagtgttcag
     301  caggacgacc agatcgaccg cgagcacgac gagcgtaacg cagagatttc
     351  cgcctgcaac gctcgggccc tgagtgaggg taggccagca agtttggttt
     401  acctttcgcg ggacgcttgt gatatacccg agcactccgg aacgtgccgg
     451  tttgacaaat acctcaactt ttga