Sequence of DPV Chilli leaf curl virus
Chilli leaf curl virus complete genome, isolate P-15
ACC No: HE806431
Dated: 2013-01-07 | Length: 2748 | CRC: -798916223
ID HE806431; SV 1; circular; genomic DNA; STD; VRL; 2748 BP.
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AC HE806431;
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DT 07-JAN-2013 (Rel. 115, Created)
DT 07-JAN-2013 (Rel. 115, Last updated, Version 1)
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DE Chilli leaf curl virus complete genome, isolate P-15
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KW complete genome.
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OS Chilli leaf curl virus
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
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RN [1]
RP 1-2748
RA Akhtar S.;
RT ;
RL Submitted (08-MAY-2012) to the INSDC.
RL Akhtar S., College of Agricultural and Marine, Sciences, Sultan Qaboos
RL University, Plant Biotechnology Research Lab, P.O. Box-34, Al-Khod 123,
RL OMAN.
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RN [2]
RA Khan A.J., Al-Zaidi A.M., Akhtar S.;
RT "Molecular characterization and infectivity analysis of Chilli leaf curl
RT virus from Oman";
RL Unpublished.
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FH Key Location/Qualifiers
FH
FT source 1. .2748
FT /organism="Chilli leaf curl virus"
FT /host="Capsicum annuum"
FT /isolate="P-15"
FT /mol_type="genomic DNA"
FT /country="Oman:Suaiq"
FT /isolation_source="host leaf"
FT /collected_by="Abdul Rehman Mohammed Obeid Al-Matroushi"
FT /collection_date="2011"
FT /db_xref="taxon:172278"
FT CDS 151. .516
FT /gene="V2"
FT /product="pre-coat protein"
FT /protein_id="CCH63265.1"
FT /translation="MWDPLLNEFPESVHGFRCMLAVKYLQLVENSYSPDTLGYDLIRDL
FT ISVIRARNYVETTSRYNHFHARLEGTPSSQLRQPICQPCCCPHCPRHKGKGMGQQAHES
FT EAQDVQDVQKPRCSEGM"
FT CDS 311. .1069
FT /gene="V1"
FT /product="coat protein"
FT /protein_id="CCH63266.1"
FT /translation="MSKRPADIIISTPVSKVRRRLNFDSPYASRAAAPIVRVTKAKAWA
FT NRPMNRKPRMYRMYRSPDVPRGCEGPCKVQSFESRHDVVHIGKVMCIKGTGLTHRVGKR
FT FCVKSVYVLGKIWMDENIKTKNHTNSVMFFLVRDRRPTGAPQDFGDVFNMFDNEPSTAT
FT VKNMHRDRYQVLRKWHATVTGGQYASKEQALVKKFVRVNNYVVYNQQEAGKYENHSENA
FT LMLYMACTHASNPVYATLKIRIYFYDSVSN"
FT CDS complement(1066. .1470)
FT /gene="C3"
FT /gene_synonym="REn"
FT /product="replication enhancement protein"
FT /protein_id="CCH63267.1"
FT /translation="MDSRTGEPITAAQAENGVFIWEITNPLYFKITEHHNRPFLRSQDI
FT ITVQIRFNHNLRKALGMHKCFLTYRIWTTLQPQTGHFLRVFKTQVLNVLNNFAVISINN
FT VNRAVDHVLWNVLDHVVYVNQSYSIKYNLY"
FT CDS complement(1211. .1615)
FT /gene="C2"
FT /gene_synonym="TrAP"
FT /product="transcriptional activator protein"
FT /protein_id="CCH63268.1"
FT /translation="MRPSSPSQAHSTQVPIKVQHRLAKKGTRRRRVDLDCGCSYFIALR
FT CHGYGFTHRGTHHSSSSREWRVYLGDNKSPVFQDNRAPQQAIPEKPRHHHSADTVQSQP
FT EESVGDAQMFSNLPNLDDLTASDWSFLKGI"
FT CDS complement(1518. .2603)
FT /gene="C1"
FT /gene_synonym="Rep"
FT /product="replication initiation protein"
FT /protein_id="CCH63269.1"
FT /translation="MPRAGRFNINAKNYFLTYPNCSLTKEEALSQLQNLETPVNKLFIR
FT VCRELHENGEPHLHVLVQFEGKYQCTNNRFFDLISPTRSAHFHPNIQRAKSSSDVKAYV
FT EKDGDFIDSGVFQIDGRSARGGCQSANDAYAEAINSGSKAAALNILREKAPKDYVLQFH
FT NLNANLDRIFTPPPDVYVSPFLSSSFDQVPDELEEWASVNVVGAAARPLRPMSIVIEGD
FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDASYNVIDDVDPHYLKHFKEFMGAQRDW
FT QSNTKYGKPVQIKGGIPAIFLCNPGPNSSYKEFLDEEKNSALKHWALKNATFITLTGPL
FT YSGSNQSAAQAGQEGDQASSR"
FT CDS complement(2153. .2446)
FT /gene="C4"
FT /product="C4 protein"
FT /protein_id="CCH63270.1"
FT /translation="MGNLIYTCSSNSKANINAQTTDSSTSFPQPGQHISIRTFRELRAL
FT QMSKPMWRKTETSLTLEFSRSMADQLEEVANLPTTHMPRQSIQGPRLRPSIF"
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SQ Sequence 2748 BP; 759 A; 552 C; 633 G; 804 T; 0 other;
he806431 Length: 2748 07-JAN-2013 Type: N Check: 6984 ..
1 accggatggc cgcgattttt tgtttaccgt ggaccccgcg atgcacgtgc
51 tgacaaatac atgtggacca attaaaaacg tccctcaaag cttaattgtt
101 tcgtggtccc ctctataaac ttgggctcca agtagtgggt ttgtatcaca
151 atgtgggatc ctttactaaa tgagtttccc gaaagtgttc atgggtttag
201 gtgtatgtta gcagtgaaat atctgcaatt agtagaaaat tcatattcgc
251 cagacacatt agggtacgat ttaatcaggg atttaatttc agttattagg
301 gctagaaatt atgtcgaaac gaccagcaga tataatcatt tccacgcccg
351 tctcgaaggt acgccgtcgt ctcaacttcg acagcccata tgccagccgt
401 gctgctgccc ccattgtccg cgtcacaaag gcaaaggcat gggccaacag
451 gcccatgaat cggaagccca ggatgtacag gatgtacaga agcccagatg
501 ttccgagggg atgtgaaggc ccatgtaagg tccagtcctt tgagtctaga
551 cacgatgtag ttcatatagg gaaggttatg tgtattaagg gtaccgggtt
601 aacccataga gtaggtaagc gtttctgtgt taagtctgtt tatgtcttag
651 ggaagatatg gatggatgag aatatcaaga ctaagaatca cacgaatagt
701 gtgatgttct tccttgtccg tgatcgtcga cctacaggtg caccacaaga
751 ttttggagat gtgtttaata tgttcgacaa cgaacctagc actgccactg
801 tgaagaatat gcatagagat cgttatcagg tcttgaggaa atggcacgca
851 acggttactg gtggacagta cgcgtcgaag gaacaggcat tagttaagaa
901 gttcgttagg gttaacaatt atgttgtgta taaccagcag gaagctggaa
951 aatatgagaa tcatagtgag aatgctctga tgttgtatat ggcgtgtact
1001 cacgcctcta accctgtgta tgctacattg aagatacgta tctatttcta
1051 tgattcagta tcgaattaat aaagattata ttttattgaa tatgattggt
1101 ttacatatac aacgtgatct aatacattcc ataatacatg atcaactgct
1151 ctatttacat tgttaatact aattacagca aaattattaa gcacattcaa
1201 tacttgggtt ttaaataccc ttaagaaatg accagtctga ggctgtaagg
1251 tcgtccagat tcggtaggtt agaaaacatt tgtgcatccc caacgctttc
1301 ctcaggttgt gattgaaccg tatctgcact gtgatgatgt cttggcttct
1351 caggaatggc ctgttgtggt gctctgttat cttgaaatac aggggatttg
1401 ttatctccca gataaacacg ccattctctg cttgagctgc tgtgatgggt
1451 tcccctgtgc gtgaatccat agccgtggca acgtaatgcg atgaaatatg
1501 aacagccgca atcgaggtca acgcgacgac gcctggtccc cttcttggcc
1551 agcctgtgct gcactttgat tggaacctga gtagagtggg cctgtgaggg
1601 tgatgaaggt cgcattcttt aaagcccaat gtttgagtgc ggaattcttt
1651 tcttcatcca agaactcttt atagctggaa ttgggtcctg gattgcagag
1701 gaagatagcg ggaattccac ctttaatttg aactggcttt ccgtattttg
1751 tatttgattg ccagtccctt tgggccccca tgaattcttt aaagtgtttt
1801 agataatgcg ggtcgacgtc atcaatgacg ttatacgagg catcattgct
1851 gtacacttta gggctaaggt ctaagtgacc acataggtag ttatgtggac
1901 ccaacgacct agcccacatg gtcttcccgg ttcgactatc accctcaatt
1951 acaatactca tgggtctcaa aggccgcgca gcggcaccca ccacgttcac
2001 agaagcccat tcctcaagtt catcaggaac ttgatcaaaa gaagaagaaa
2051 gaaaaggaga aacataaaca tccggtggag gcgtaaaaat cctatctaaa
2101 ttagcattta aattatgaaa ttgtaaaaca taatctttgg gagctttctc
2151 ccttaaaata ttgagggccg cagccttgga ccctgaattg attgcctcgg
2201 catatgcgtc gttggcagat tggcaacctc ctctagctga tctgccatcg
2251 atctggaaaa ctccagagtc aatgaagtct ccgtctttct ccacataggc
2301 tttgacatct gaagagctct tagctctctg aatgttcgga tggaaatgtg
2351 ctgaccgggt tggggaaatg aggtcgaaga atctgttgtt tgtgcattga
2401 tatttgcctt cgaattggac gagcacgtgt agatgaggtt ccccattctc
2451 gtgcaattct ctgcaaaccc taataaataa tttatttact ggggtttcta
2501 agttttgtaa ttgggaaagg gcctcttctt tagtaagaga gcagttagga
2551 tatgttagga aataattttt agcatttata ttgaatctcc ccgctctagg
2601 catattggtg gacactcaaa cttactatgc aatcggtgga atgggggaca
2651 atttatatgt gtccaccaat ggcaaattgg taattgttgt tacattaaaa
2701 aaatttaaaa ttcaaattcc gacaaaagcg gccatccgca ttaatatt