Sequence of DPV Ageratum enation virus
Ageratum enation virus complete genome, isolate Palampur
ACC No: HE861940
Dated: 2012-06-19 | Length: 2752 | CRC: 541073001
ID HE861940; SV 1; circular; genomic DNA; STD; VRL; 2752 BP.
XX
AC HE861940;
XX
DT 19-JUN-2012 (Rel. 113, Created)
DT 19-JUN-2012 (Rel. 113, Last updated, Version 1)
XX
DE Ageratum enation virus complete genome, isolate Palampur
XX
KW complete genome.
XX
OS Ageratum enation virus
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
XX
RN [1]
RP 1-2752
RA Singh L.;
RT ;
RL Submitted (15-JUN-2012) to the INSDC.
RL Singh L., Plant Virology Lab, CSIR IHBT, P.O. Box 6 Palampur, Himachal
RL Pradesh, INDIA.
XX
RN [2]
RA Sharma S., Singh N., Singh L., Hallan V.;
RT "Molecular characterization of Ageratum enation virus infecting soyabean
RT (Glycine max)";
RL Unpublished.
XX
FH Key Location/Qualifiers
FH
FT source 1. .2752
FT /organism="Ageratum enation virus"
FT /host="Glycine max"
FT /isolate="Palampur"
FT /mol_type="genomic DNA"
FT /country="India:Palampur"
FT /isolation_source="leaf"
FT /collected_by="Shivani Sharma"
FT /collection_date="24-Aug-2011"
FT /identified_by="Shivani Sharma"
FT /db_xref="taxon:188333"
FT CDS 56. .412
FT /gene="V2"
FT /product="pre-coat protein"
FT /protein_id="CCI71994.1"
FT /translation="MWDPLVNEFPETVHGFRCMLAVKYLQLVEKTYSPDTLGYDLIRDL
FT ISVIRARNYVEATSRYNHFHARFEGTSPSQLRQPICEPCCCPHCPRHQSKSMGEQAHEQ
FT KAQDVQDVQKSRCP"
FT CDS 216. .986
FT /gene="V1"
FT /product="coat protein"
FT /protein_id="CCI71995.1"
FT /translation="MSKRPADIIISTPASKVRRRLNFDSPYVSRAAAPIVRVTKARAWA
FT NRPMNRKPRMYRMYRSPDVPRGCEGPCKVQSFESRHDIQHIGKVMCVSDVTRGTGLTHR
FT VGKRFCVKSVYVLSKIWMDENIKTKNHTNSVMFFLVRDRRPVDKPQDFGEVFNMFDNEP
FT STATVKNVHRDRYQVLRKWHATVTGGQYASKEQALVKKFVRVNNYVVYNQQEAGKYENH
FT SENALMLYMACTHASNPVYATLKIRIYFYDSVTN"
FT CDS complement(983. .1387)
FT /gene="C3"
FT /product="replication enhancer protein"
FT /protein_id="CCI71996.1"
FT /translation="MDSRTGELITAAQAENGVFIWEIQNPLYFKITDHQNRPFLMKEDI
FT ITVQIQFNYNLRKALGIHKCFLVYRIWMTSQPQTGRFLRVFKTQVLKYLNNLGVISINN
FT VIRSVDHVLWDVLEHIVYVEPSYSIKFNIY"
FT CDS complement(1128. .1532)
FT /gene="C2"
FT /product="transcription activator protein"
FT /protein_id="CCI71997.1"
FT /translation="MRSSSPSKAHSTQVPIKVQHRLAKKGTRRRRVDLPCGCSYFIALA
FT CHNHGFTHRGTHHCSSSREWRVYLGDSKSPVFQDNRSPEPAISHERGHHHRPNTVQLQP
FT EESVGDTQVFSSLPNLDDFTASDWSFLKGL"
FT CDS complement(1435. .2520)
FT /gene="C1"
FT /product="replication-associated protein"
FT /protein_id="CCI71998.1"
FT /translation="MAPPKRFQIYAKNFFLTYPQCSLTKEEALSQIQNLQTPVNKKYIK
FT ICRELHENGEPHLHVLIQFEGKYKCQNNRFFDLVSPNRSAHFHPNIQGAKSSTDVKSYI
FT DKDGDTLEWGEFQIDGRSARGGQQTANDAAAEALNAGSKEAAMAIIKEKLPEKFIFQYH
FT NLNANLDRIFSPPLEVYVSPFLSSSFDQVPEELEEWVSENVMVAAARPLRPQSIVFDGD
FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDW
FT QSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEFLDEEKNNALRNWALKNAIFVTLEGPL
FT YSGSNQSAAQASQEGDEASTC"
FT CDS complement(2106. .2363)
FT /gene="C4"
FT /product="C4 protein"
FT /protein_id="CCI71999.1"
FT /translation="MGNLIFTCLSSSKENTNAKITDSSTWYPQTGQHISIRTFRELNQA
FT PTSSPTSTRTETPSNGENSRSMEDLHEEVNRQLMMLLQKP"
XX
SQ Sequence 2752 BP; 765 A; 535 C; 608 G; 844 T; 0 other;
he861940 Length: 2752 19-JUN-2012 Type: N Check: 6460 ..
1 aattgttttg tggtccctta tttaaacttg ctcagcaagt agtgcactcc
51 gcactatgtg ggatccatta gttaacgagt ttcctgaaac cgttcacggc
101 tttaggtgta tgttagcagt taaatatcta cagttagtag agaagactta
151 ttctcctgac acattagggt acgatttaat tagggattta atttcagtaa
201 ttagggccag aaattatgtc gaagcgacca gcagatataa tcatttccac
251 gcccgcttcg aaggtacgtc gccgtctcaa cttcgacagc ccatatgtga
301 gccgtgctgc tgcccccatt gtccgcgtca ccaaagcaag agcatgggcg
351 aacaggccca tgaacagaaa gcccaggatg tacaggatgt acagaagtcc
401 agatgtccct agaggatgtg aaggcccatg taaggtccag tcgtttgagt
451 ccagacatga cattcagcat ataggtaaag tcatgtgtgt cagtgatgtt
501 acccgtggaa ctgggctgac ccaccgagtg ggtaaaaggt tttgtgttaa
551 atccgtttat gtcttgagta agatatggat ggacgagaat attaagacta
601 aaaatcacac gaatagtgtg atgttttttt tagttaggga tcgtagacct
651 gtggataaac ctcaagattt tggagaggtt tttaacatgt ttgataatga
701 gcccagcacg gccactgtga agaatgttca tcgtgatagg tatcaagtgc
751 ttcggaaatg gcatgcaact gttacgggtg gacaatatgc gtcaaaggaa
801 caagctcttg tgaagaagtt tgttagggtt aataattatg ttgtgtataa
851 ccagcaagaa gctggcaagt atgaaaatca ttctgagaat gcgttaatgt
901 tgtatatggc atgtacgcat gcctctaacc cagtgtatgc tactttgaag
951 atacggatct atttttatga ttccgtaaca aattaataaa tattaaattt
1001 tattgaatat gatggttcta catatacaat gtgttctaat acatcccata
1051 aaacatgatc aactgatctg attacattat taatactgat aactcctaaa
1101 ttatttaaat attttaaaac ttgagtctta aagaccctta agaaacgacc
1151 agtctgaggc tgtgaagtca tccagattcg gtagactaga aaacacttgt
1201 gtatccccaa cgctttcctc aggttgtaat tgaactgtat ttggacggtg
1251 atgatgtcct ctttcatgag aaatggccgg ttctggtgat ctgttatctt
1301 gaaatacagg ggattttgaa tctcccagat aaacacgcca ttctctgctt
1351 gagctgcagt gatgagttcc cctgtgcgtg aatccatggt tgtggcaggc
1401 taatgctatg aagtatgaac acccacaagg gagatcaaca cgtcgacgcc
1451 tcgtcccctt cttggctagc ctgtgctgca ctttgattgg aacctgagta
1501 gagtgggcct tcgagggtga cgaagatcgc attctttaaa gcccaatttc
1551 tgagtgcatt attcttctct tcatccaaga actctttata acttgaatta
1601 ggtcctggat tgcagaggaa gatagtggga attccgcctt taatttgaac
1651 tggctttccg tatttggtat ttgattgcca gtccctttgg gcccccatga
1701 attctttaaa atgctttagg tagtggggat ctacgtcatc gatgacgtta
1751 taccacgcat cattgctgta aactttgggg cttagatcta aatgaccgca
1801 taggtaatta tgaggcccta atgacctagc ccacatcgtt ttacccgtac
1851 gactgtctcc gtcaaatact atactttgag gcctcagagg ccgcgcagcg
1901 gcaaccatga cattttctga gacccattct tcaagttctt caggaacttg
1951 atcaaaagaa gaagataaaa aaggcgaaac ataaacctcc aacggaggac
2001 taaaaatcct atctaaatta gcatttaaat tatgatattg aaaaataaat
2051 ttttctggga gtttctcctt tattatagcc attgcagctt ctttagaacc
2101 tgcatttagg gcttctgcag cagcatcatt agctgtctgt tgacctcctc
2151 gtgcagatct tccatcgatc tggaattctc cccattcgag ggtgtctccg
2201 tccttgtcga tgtaggactt gacgtcggtg cttgatttag ctccctgaat
2251 gttcggatgg aaatgtgctg acctgtttgg ggataccagg tcgaagaatc
2301 tgttattttg gcatttgtat tttccttcga actggataag cacgtgaaga
2351 tgaggttccc cattttcgtg aagctctctg cagattttga tatatttttt
2401 gtttactggg gtttgtaggt tttggatttg ggaaagtgct tcttctttag
2451 taagagagca ttgtggataa gtgagaaaga aatttttggc atatatttga
2501 aatcgttttg gaggagccat tgacttggtc aatcggtact cagctctagt
2551 cttatgtcaa ttggtgatca gtactcaata tatagtgagt accgaatggc
2601 attattcgta attctgaaaa gaaattcaaa attcaaattt gaaatccaaa
2651 agcggccatc cgtataatat taccggatgg ccgcgatttt ttaaagtggt
2701 ccccacaact gacaaagaca tgtccaccaa tcaaaaccgt cgctcaaagc
2751 tt