Sequence of DPV Rice grassy stunt virus

Rice grassy stunt virus viral cRNA for Pc3 protein, isolate HG09-06

ACC No: HE963247

Dated: 2013-04-26 | Length: 819 | CRC: -1666397132

                
ID   HE963247; SV 1; linear; viral cRNA; STD; VRL; 819 BP.
XX
AC   HE963247;
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DT   26-APR-2013 (Rel. 116, Created)
DT   26-APR-2013 (Rel. 116, Last updated, Version 1)
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DE   Rice grassy stunt virus viral cRNA for Pc3 protein, isolate HG09-06
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KW   .
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OS   Rice grassy stunt virus
OC   Viruses; ssRNA negative-strand viruses; Tenuivirus.
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RN   [1]
RP   1-819
RA   Hebrard E.;
RT   ;
RL   Submitted (12-JUL-2012) to the INSDC.
RL   RPB, IRD, 911 av Agropolis BP64501, 34080 Montpellier, FRANCE.
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RN   [2]
RX   DOI; 10.1007/s11262-012-0845-3.
RX   PUBMED; 23132204.
RA   Ta H.A., Nguyen D.P., Causse S., Nguyen T.D., Ngo V.V., Hebrard E.;
RT   "Molecular diversity of Rice grassy stunt virus in Vietnam";
RL   Virus Genes 46(2):383-386(2013).
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FH   Key             Location/Qualifiers
FH
FT   source          1. .819
FT                   /organism="Rice grassy stunt virus"
FT                   /segment="3"
FT                   /isolate="HG09-06"
FT                   /mol_type="viral cRNA"
FT                   /db_xref="taxon:66266"
FT   CDS             1. .819
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /gene="Pc3"
FT                   /product="Pc3 protein"
FT                   /protein_id="CCJ28032.1"
FT                   /translation="MFSLSDFLSEIGNVIREVEDKDNKEYEDQIREIQNLHRDMNHVEL
FT                   KVSENIKKACPEVTEIEANLNSNNTIIDLKDDALTEYKEIVWRTDNDESVEMSKDTVKE
FT                   MEFKYKDDEFIISFNLDLNYNVCNRNSDCDISNDKKSENGENVLEAHTDMIQPIVTSDC
FT                   YHINEIINNGAYEKIAIFSNPSTINLDDGRKLIKVTIEDENIKKKIEASVKDITCIPIY
FT                   KLGNGGDCDSIISNCMSMDGVIKKLTETLIIYCSLDDVFSWLILKSVPND"
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SQ   Sequence 819 BP; 318 A; 103 C; 166 G; 232 T; 0 other;

he963247 Length: 819  26-APR-2013  Type: N  Check: 9272  ..

       1  atgttttcac tttcagactt tctgtctgaa ataggcaatg ttatccgtga
      51  agttgaggat aaagataaca aggagtatga agaccagatt cgtgaaatac
     101  agaacctaca tagagatatg aatcatgttg aattaaaagt cagtgaaaac
     151  ataaagaagg cctgtcctga ggttactgag attgaggcaa atttaaattc
     201  aaataataca ataattgatt tgaaagatga tgcactaaca gagtataaag
     251  aaatagtgtg gagaactgat aatgatgaat cagttgagat gtccaaggac
     301  acagtaaagg agatggaatt taagtataag gatgatgagt tcattatatc
     351  ctttaactta gatcttaatt ataatgtctg caataggaat tctgactgtg
     401  atatttctaa tgataaaaaa agtgaaaatg gagaaaatgt tctggaagca
     451  cacactgaca tgatacaacc aattgtcact tcagattgtt atcatatcaa
     501  tgagattatc aacaatggag catatgaaaa aatagcaatc tttagcaatc
     551  ctagtacaat aaatttagat gatggtcgaa agctaataaa agtgacaata
     601  gaagatgaaa acatcaagaa gaagatagag gctagtgtca aagacatcac
     651  atgcattccc atctataaat taggaaatgg gggtgattgt gatagtatta
     701  ttagcaattg tatgagcatg gatggtgtta ttaagaaact cactgagaca
     751  ttaatcatat actgctcact agatgatgtg ttcagctggc taatactgaa
     801  atcagtgcct aatgattga