Sequence of DPV Rice grassy stunt virus

Rice grassy stunt virus viral cRNA for P5 protein, isolate BT09-02

ACC No: HE963268

Dated: 2013-04-26 | Length: 576 | CRC: -1214708045

                
ID   HE963268; SV 1; linear; viral cRNA; STD; VRL; 576 BP.
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AC   HE963268;
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DT   26-APR-2013 (Rel. 116, Created)
DT   26-APR-2013 (Rel. 116, Last updated, Version 1)
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DE   Rice grassy stunt virus viral cRNA for P5 protein, isolate BT09-02
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KW   .
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OS   Rice grassy stunt virus
OC   Viruses; ssRNA negative-strand viruses; Tenuivirus.
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RN   [1]
RP   1-576
RA   Hebrard E.;
RT   ;
RL   Submitted (12-JUL-2012) to the INSDC.
RL   RPB, IRD, 911 av Agropolis BP64501, 34080 Montpellier, FRANCE.
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RN   [2]
RX   DOI; 10.1007/s11262-012-0845-3.
RX   PUBMED; 23132204.
RA   Ta H.A., Nguyen D.P., Causse S., Nguyen T.D., Ngo V.V., Hebrard E.;
RT   "Molecular diversity of Rice grassy stunt virus in Vietnam";
RL   Virus Genes 46(2):383-386(2013).
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FH   Key             Location/Qualifiers
FH
FT   source          1. .576
FT                   /organism="Rice grassy stunt virus"
FT                   /segment="5"
FT                   /isolate="BT09-02"
FT                   /mol_type="viral cRNA"
FT                   /db_xref="taxon:66266"
FT   CDS             1. .576
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /gene="P5"
FT                   /product="P5 protein"
FT                   /function="putative silencing suppressor"
FT                   /protein_id="CCJ28053.1"
FT                   /translation="MSGMNSEEYMVLNTMLQTVGCNAHELLKKTPGCEKAVYLFCCKST
FT                   MIRELVTVIRGIDESTINGQLLYSVCRELLKLMYLEDGSENIAIIKPLLLLLTEKNKMV
FT                   NKVSTKNCWICSLYKRELAEGSPLVVTKSKTEVKHFADSVNVGFVTVQHGSELPDLPMT
FT                   IYKPVKEQKHQYGFLSDSKLITADYVRI"
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SQ   Sequence 576 BP; 191 A; 101 C; 124 G; 159 T; 1 other;

he963268 Length: 576  26-APR-2013  Type: N  Check: 469  ..

       1  atgtctggca tgaattcaga agagtacatg gtgctcaaca ccatgcttca
      51  aacagtaggg tgtaatgcac acgaactact gaaaaaaact ccaggttgtg
     101  aaaaggctgt gtatttattc tgttgtaagt ctactatgat acgtgaatta
     151  gtgactgtga tcaggggtat tgatgaaagc accatcaatg gtcaattgct
     201  ataytctgtt tgcagagagc tgctaaaact aatgtatctg gaagatggct
     251  ctgagaacat agcaataatc aagccattgc tactattact cactgagaaa
     301  aataagatgg tgaacaaggt ttccacaaag aactgctgga tctgtagctt
     351  atacaaaaga gaattggcag aagggtcccc tctagttgtt actaaaagta
     401  agactgaagt gaaacacttc gcagactcag tgaatgttgg ttttgtcact
     451  gttcaacatg gttcagagtt accagacttg cctatgacaa tatataaacc
     501  agttaaagaa cagaagcacc aatatgggtt tctgtctgac tctaagctaa
     551  tcactgcaga ttacgttaga atctag