Sequence of DPV Rice grassy stunt virus

Rice grassy stunt virus viral cRNA for P5 protein, isolate KG09-07

ACC No: HE963269

Dated: 2013-04-26 | Length: 576 | CRC: -1377414351

                
ID   HE963269; SV 1; linear; viral cRNA; STD; VRL; 576 BP.
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AC   HE963269;
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DT   26-APR-2013 (Rel. 116, Created)
DT   26-APR-2013 (Rel. 116, Last updated, Version 1)
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DE   Rice grassy stunt virus viral cRNA for P5 protein, isolate KG09-07
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KW   .
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OS   Rice grassy stunt virus
OC   Viruses; ssRNA negative-strand viruses; Tenuivirus.
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RN   [1]
RP   1-576
RA   Hebrard E.;
RT   ;
RL   Submitted (12-JUL-2012) to the INSDC.
RL   RPB, IRD, 911 av Agropolis BP64501, 34080 Montpellier, FRANCE.
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RN   [2]
RX   DOI; 10.1007/s11262-012-0845-3.
RX   PUBMED; 23132204.
RA   Ta H.A., Nguyen D.P., Causse S., Nguyen T.D., Ngo V.V., Hebrard E.;
RT   "Molecular diversity of Rice grassy stunt virus in Vietnam";
RL   Virus Genes 46(2):383-386(2013).
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FH   Key             Location/Qualifiers
FH
FT   source          1. .576
FT                   /organism="Rice grassy stunt virus"
FT                   /segment="5"
FT                   /isolate="KG09-07"
FT                   /mol_type="viral cRNA"
FT                   /db_xref="taxon:66266"
FT   CDS             1. .576
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /gene="P5"
FT                   /product="P5 protein"
FT                   /function="putative silencing suppressor"
FT                   /protein_id="CCJ28054.1"
FT                   /translation="MSGMNSEEYMVLNTMLQTVGCNAHELLKKTPGCEKAVYLFCCKST
FT                   MIRELVTVIRGIDESTINGQLLYSVCRELLKLMYLEDGSENIAIIKPLLLLLTEKNKMV
FT                   NKASTKNCWICSLYKRELAEGSPLVVTRSKTEVKHFADSVNVGFVTVQHGSELPDLPMT
FT                   IYKPVKEQKHQYGFLSDFELITADYVRA"
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SQ   Sequence 576 BP; 186 A; 101 C; 129 G; 160 T; 0 other;

he963269 Length: 576  26-APR-2013  Type: N  Check: 1551  ..

       1  atgtctggca tgaattcaga agagtacatg gtgctcaaca ccatgcttca
      51  aacagtaggg tgtaatgcac acgaactact gaaaaaaact ccaggttgtg
     101  aaaaggctgt gtatttattc tgttgtaagt ctactatgat acgtgaatta
     151  gtgactgtga tcaggggtat tgatgaaagc accatcaatg gtcaattgct
     201  atattctgtt tgcagagagc tgctaaaact aatgtatctg gaagatggct
     251  ctgagaacat agcaataatc aagccattgc tactattact cactgagaaa
     301  aataagatgg tgaacaaggc ttccacaaag aactgctgga tctgtagctt
     351  atacaaaaga gaattggcgg aagggtcccc tctagttgtt actagaagta
     401  agactgaagt gaaacacttc gcagattcag tgaatgttgg ttttgtcact
     451  gttcaacatg gttcagagtt accagacttg cctatgacaa tatataagcc
     501  agttaaagaa cagaagcacc aatatgggtt tctgtctgac tttgagctaa
     551  tcactgcaga ttacgttaga gcctag