Sequence of DPV Pepper golden mosaic virus

Pepper golden mosaic virus cp gene for coat protein, isolate PGHUA06W2007

ACC No: HE967522

Dated: 2013-04-12 | Length: 756 | CRC: -1362462165

                
ID   HE967522; SV 1; linear; genomic DNA; STD; VRL; 756 BP.
XX
AC   HE967522;
XX
DT   05-OCT-2012 (Rel. 114, Created)
DT   12-APR-2013 (Rel. 116, Last updated, Version 2)
XX
DE   Pepper golden mosaic virus cp gene for coat protein, isolate PGHUA06W2007
XX
KW   .
XX
OS   Pepper golden mosaic virus
OC   Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
XX
RN   [1]
RP   1-756
RA   Fraile A.;
RT   ;
RL   Submitted (20-JUL-2012) to the INSDC.
RL   Biotecnologia, Centro de Biotecnologia y Genomica de Plantas UPM-, Campus
RL   de Montegancedo, E-28223 Pozuelo de Alarcon (Madrid), SPAIN.
XX
RN   [2]
RX   DOI; 10.1111/mec.12232.
RX   PUBMED; 23379795.
RA   Rodelo-Urrego M., Pagan I., Gonzalez-Jara P., Betancourt M.,
RA   Moreno-Letelier A., Ayllon M.A., Fraile A., Pinero D., Garcia-Arenal F.;
RT   "Landscape heterogeneity shapes host-parasite interactions and results in
RT   apparent plant-virus codivergence";
RL   Mol. Ecol. 22(8):2325-2340(2013).
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .756
FT                   /organism="Pepper golden mosaic virus"
FT                   /host="Capsicum annuum var. glabriusculum (chiltepin)"
FT                   /isolate="PGHUA06W2007"
FT                   /mol_type="genomic DNA"
FT                   /country="Mexico:Oaxaca, Huatulco"
FT                   /collection_date="2007"
FT                   /db_xref="taxon:223301"
FT   CDS             1. .756
FT                   /transl_table=1
FT                   /gene="cp"
FT                   /product="coat protein"
FT                   /db_xref="GOA:K0MQU9"
FT                   /db_xref="InterPro:IPR000263"
FT                   /db_xref="InterPro:IPR000650"
FT                   /db_xref="UniProtKB/TrEMBL:K0MQU9"
FT                   /protein_id="CCJ67843.1"
FT                   /translation="MVKRDAPWRLMAGTSKVSRSANYSRGTGMGPKFDKAAAWVNRPMY
FT                   RKPRIYRTYRSPDVPRGCEGPCKVQSFEQRHDISHVGKVMCISDVTRGNGITHRVGKRF
FT                   CVKSAYVLGKIWMDENIKLKNHTNSVMFWPVRDRRPYGTPMDFGQVFNMYDNEPSTATV
FT                   KNDLRDRFQVMHRFSAKVTGGQYASNEQALVRRFWKVNNYVVYNHQEAGKYENHTENAL
FT                   LLYMACTHASNPVYATLKIRIYFYDSITN"
XX
SQ   Sequence 756 BP; 200 A; 166 C; 198 G; 192 T; 0 other;

he967522 Length: 756  12-APR-2013  Type: N  Check: 5289  ..

       1  atggttaagc gggatgcccc atggcgttta atggcgggga cctctaaggt
      51  ttcccgctct gccaattatt cacgtggcac gggtatgggc cctaaattcg
     101  ataaggccgc tgcttgggtt aacaggccca tgtacaggaa gcccaggata
     151  tatcgtacgt atagaagccc agatgtgcct agaggttgtg aagggccttg
     201  taaggtccag tccttcgagc agcggcatga tatctcacat gttggcaagg
     251  tcatgtgcat ttctgacgtg acacgtggta acggcattac tcatcgtgta
     301  ggcaagcgtt tttgcgtgaa gtctgcatac gttttgggta agatatggat
     351  ggacgagaat atcaagctca agaaccacac caacagcgtc atgttctggc
     401  ccgtgcgaga taggagacca tatggtaccc ctatggactt tggtcaagtg
     451  tttaacatgt atgacaacga gcccagtaca gccactgtga agaacgatct
     501  tcgtgatcgt ttccaagtca tgcacaggtt ctcggctaag gtcacaggtg
     551  gacagtatgc cagcaacgag caggcattgg ttaggcgttt ctggaaggtg
     601  aacaactacg tagtgtacaa ccatcaggaa gctggcaaat acgagaatca
     651  tactgagaac gccctgctat tgtatatggc atgtactcat gcctctaacc
     701  ctgtgtacgc gacattgaaa attcgaatct atttttatga ttcgataaca
     751  aattaa