Sequence of DPV Pepper golden mosaic virus

Pepper golden mosaic virus cp gene for coat protein, isolate PGHUA210W2008

ACC No: HE967524

Dated: 2013-04-12 | Length: 756 | CRC: -2016038944

                
ID   HE967524; SV 1; linear; genomic DNA; STD; VRL; 756 BP.
XX
AC   HE967524;
XX
DT   05-OCT-2012 (Rel. 114, Created)
DT   12-APR-2013 (Rel. 116, Last updated, Version 2)
XX
DE   Pepper golden mosaic virus cp gene for coat protein, isolate PGHUA210W2008
XX
KW   .
XX
OS   Pepper golden mosaic virus
OC   Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
XX
RN   [1]
RP   1-756
RA   Fraile A.;
RT   ;
RL   Submitted (20-JUL-2012) to the INSDC.
RL   Biotecnologia, Centro de Biotecnologia y Genomica de Plantas UPM-, Campus
RL   de Montegancedo, E-28223 Pozuelo de Alarcon (Madrid), SPAIN.
XX
RN   [2]
RX   DOI; 10.1111/mec.12232.
RX   PUBMED; 23379795.
RA   Rodelo-Urrego M., Pagan I., Gonzalez-Jara P., Betancourt M.,
RA   Moreno-Letelier A., Ayllon M.A., Fraile A., Pinero D., Garcia-Arenal F.;
RT   "Landscape heterogeneity shapes host-parasite interactions and results in
RT   apparent plant-virus codivergence";
RL   Mol. Ecol. 22(8):2325-2340(2013).
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .756
FT                   /organism="Pepper golden mosaic virus"
FT                   /host="Capsicum annuum var. glabriusculum (chiltepin)"
FT                   /isolate="PGHUA210W2008"
FT                   /mol_type="genomic DNA"
FT                   /country="Mexico:Oaxaca, Huatulco"
FT                   /collection_date="2008"
FT                   /db_xref="taxon:223301"
FT   CDS             1. .756
FT                   /transl_table=1
FT                   /gene="cp"
FT                   /product="coat protein"
FT                   /db_xref="GOA:A7IZR7"
FT                   /db_xref="InterPro:IPR000263"
FT                   /db_xref="InterPro:IPR000650"
FT                   /db_xref="UniProtKB/TrEMBL:A7IZR7"
FT                   /protein_id="CCJ67845.1"
FT                   /translation="MVKRDAPWRLMAGTSKVSRSANYSRGTGMGPKFDKAAAWVNRPMY
FT                   RKPRIYRTYRSPDVPRGCEGPCKVQSFEQRHDISHVGKVMCISDVTRGNGITHRVGKRF
FT                   CVKSAYVLGKIWMDENIKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNMYDNEPSTATV
FT                   KNDLRDRFQVMHRFSAKVTGGQYASNEQALVRRFWKVNNYVVYNHQEAGKYENHTENAL
FT                   LLYMACTHASNPVYATLKIRIYFYDSITN"
XX
SQ   Sequence 756 BP; 199 A; 165 C; 198 G; 194 T; 0 other;

he967524 Length: 756  12-APR-2013  Type: N  Check: 6814  ..

       1  atggttaagc gggatgcccc atggcgttta atggcgggga cctctaaggt
      51  ttcccgctct gccaattatt cacgtggcac gggtatgggc cctaaattcg
     101  ataaggccgc tgcttgggtt aacaggccca tgtacaggaa gcccaggata
     151  tatcgtactt atcgaagccc agatgtgcct agaggttgtg aagggccttg
     201  taaggtccag tccttcgagc agcggcatga tatctcacat gttggcaagg
     251  tcatgtgcat ttcagacgtg acacgtggta atggtattac ccatcgtgta
     301  ggcaagcgtt tctgcgtcaa gtctgcatat gttctgggta agatatggat
     351  ggacgagaat atcaagctca agaaccacac taacagcgtc atgttctggc
     401  tcgtgagaga taggagacca tatggtactc ccatggattt tggtcaagtg
     451  ttcaacatgt atgacaacga gcctagcaca gccaccgtga agaacgatct
     501  gcgtgatcgt ttccaagtta tgcacaggtt ctccgctaag gtcacaggtg
     551  gacagtatgc cagtaacgag caggcgttgg ttaggcgctt ctggaaggtg
     601  aacaactacg tggtctataa ccaccaggaa gctggcaaat acgagaatca
     651  tacggagaac gccctgttat tgtatatggc atgtactcat gcctctaatc
     701  ctgtgtacgc gacattgaaa attcgaatct atttttatga ttcgataaca
     751  aattaa