Sequence of DPV Pepper golden mosaic virus

Pepper golden mosaic virus cp gene for coat protein, isolate PGBER40W2010

ACC No: HE967553

Dated: 2013-04-12 | Length: 756 | CRC: -857914307

                
ID   HE967553; SV 1; linear; genomic DNA; STD; VRL; 756 BP.
XX
AC   HE967553;
XX
DT   05-OCT-2012 (Rel. 114, Created)
DT   12-APR-2013 (Rel. 116, Last updated, Version 2)
XX
DE   Pepper golden mosaic virus cp gene for coat protein, isolate PGBER40W2010
XX
KW   .
XX
OS   Pepper golden mosaic virus
OC   Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
XX
RN   [1]
RP   1-756
RA   Fraile A.;
RT   ;
RL   Submitted (20-JUL-2012) to the INSDC.
RL   Biotecnologia, Centro de Biotecnologia y Genomica de Plantas UPM-, Campus
RL   de Montegancedo, E-28223 Pozuelo de Alarcon (Madrid), SPAIN.
XX
RN   [2]
RX   DOI; 10.1111/mec.12232.
RX   PUBMED; 23379795.
RA   Rodelo-Urrego M., Pagan I., Gonzalez-Jara P., Betancourt M.,
RA   Moreno-Letelier A., Ayllon M.A., Fraile A., Pinero D., Garcia-Arenal F.;
RT   "Landscape heterogeneity shapes host-parasite interactions and results in
RT   apparent plant-virus codivergence";
RL   Mol. Ecol. 22(8):2325-2340(2013).
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .756
FT                   /organism="Pepper golden mosaic virus"
FT                   /host="Capsicum annuum var. glabriusculum (chiltepin)"
FT                   /isolate="PGBER40W2010"
FT                   /mol_type="genomic DNA"
FT                   /country="Mexico:Queretaro, Bernal"
FT                   /collection_date="2010"
FT                   /db_xref="taxon:223301"
FT   CDS             1. .756
FT                   /transl_table=1
FT                   /gene="cp"
FT                   /product="coat protein"
FT                   /db_xref="GOA:A7IZR7"
FT                   /db_xref="InterPro:IPR000263"
FT                   /db_xref="InterPro:IPR000650"
FT                   /db_xref="UniProtKB/TrEMBL:A7IZR7"
FT                   /protein_id="CCJ67874.1"
FT                   /translation="MVKRDAPWRLMAGTSKVSRSANYSRGTGMGPKFDKAAAWVNRPMY
FT                   RKPRIYRTYRSPDVPRGCEGPCKVQSFEQRHDISHVGKVMCISDVTRGNGITHRVGKRF
FT                   CVKSAYVLGKIWMDENIKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNMYDNEPSTATV
FT                   KNDLRDRFQVMHRFSAKVTGGQYASNEQALVRRFWKVNNYVVYNHQEAGKYENHTENAL
FT                   LLYMACTHASNPVYATLKIRIYFYDSITN"
XX
SQ   Sequence 756 BP; 200 A; 167 C; 201 G; 188 T; 0 other;

he967553 Length: 756  12-APR-2013  Type: N  Check: 3531  ..

       1  atggttaagc gggatgcccc atggcgttta atggcgggga cctctaaggt
      51  ttcccgctct gccaattatt cacgtggcac gggtatgggc cctaaattcg
     101  ataaggccgc tgcttgggtt aacaggccca tgtacaggaa gcccaggata
     151  tatcgtacgt atagaagccc agatgtgcct agaggatgtg aagggccatg
     201  taaggtccag tccttcgagc agcggcatga tatctcgcat gttggcaagg
     251  tcatgtgcat ttcggacgtg acacgtggta atggtattac tcatcgtgta
     301  ggcaagcgtt tctgcgtcaa gtctgcatac gttctgggta agatatggat
     351  ggacgagaat atcaagctca agaaccacac caacagcgtc atgttctggc
     401  tcgtgagaga taggagacca tatggtaccc ctatggactt tggtcaggtg
     451  ttcaacatgt atgacaacga gcccagtaca gctactgtga agaacgatct
     501  gcgtgatcgt ttccaagtca tgcacaggtt ctcggctaag gtcacaggtg
     551  gacagtatgc cagcaacgag caggcattgg ttaggcgttt ctggaaggtg
     601  aacaactacg tcgtgtacaa ccatcaggaa gctggcaaat acgagaacca
     651  tactgagaac gccctgctat tgtatatggc atgtactcat gcctctaacc
     701  ctgtgtacgc gacattgaaa attcgaatct atttttatga ttcgataaca
     751  aattaa