Sequence of DPV Pepper golden mosaic virus

Pepper golden mosaic virus cp gene for coat protein, isolate PGBER113W2008

ACC No: HE967558

Dated: 2013-04-12 | Length: 756 | CRC: -113371955

                
ID   HE967558; SV 1; linear; genomic DNA; STD; VRL; 756 BP.
XX
AC   HE967558;
XX
DT   05-OCT-2012 (Rel. 114, Created)
DT   12-APR-2013 (Rel. 116, Last updated, Version 2)
XX
DE   Pepper golden mosaic virus cp gene for coat protein, isolate PGBER113W2008
XX
KW   .
XX
OS   Pepper golden mosaic virus
OC   Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
XX
RN   [1]
RP   1-756
RA   Fraile A.;
RT   ;
RL   Submitted (20-JUL-2012) to the INSDC.
RL   Biotecnologia, Centro de Biotecnologia y Genomica de Plantas UPM-, Campus
RL   de Montegancedo, E-28223 Pozuelo de Alarcon (Madrid), SPAIN.
XX
RN   [2]
RX   DOI; 10.1111/mec.12232.
RX   PUBMED; 23379795.
RA   Rodelo-Urrego M., Pagan I., Gonzalez-Jara P., Betancourt M.,
RA   Moreno-Letelier A., Ayllon M.A., Fraile A., Pinero D., Garcia-Arenal F.;
RT   "Landscape heterogeneity shapes host-parasite interactions and results in
RT   apparent plant-virus codivergence";
RL   Mol. Ecol. 22(8):2325-2340(2013).
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .756
FT                   /organism="Pepper golden mosaic virus"
FT                   /host="Capsicum annuum var. glabriusculum (chiltepin)"
FT                   /isolate="PGBER113W2008"
FT                   /mol_type="genomic DNA"
FT                   /country="Mexico:Queretaro, Bernal"
FT                   /collection_date="2008"
FT                   /db_xref="taxon:223301"
FT   CDS             1. .756
FT                   /transl_table=1
FT                   /gene="cp"
FT                   /product="coat protein"
FT                   /db_xref="GOA:Q3MJR4"
FT                   /db_xref="InterPro:IPR000263"
FT                   /db_xref="InterPro:IPR000650"
FT                   /db_xref="UniProtKB/TrEMBL:Q3MJR4"
FT                   /protein_id="CCJ67879.1"
FT                   /translation="MVKRDAPWRLMAGTSKVSRSANYSRGTGMGPKFDKAAAWVNRPMY
FT                   RKPRIYRTFRSPDVPRGCEGPCKVQSFEQRHDISHVGKVMCISDVTRGNGITHRVGKRF
FT                   CVKSAYVLGKIWMDENIKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNMYDNEPSTATV
FT                   KNDLRDRFQVMHRFSAKVTGGQYASNEQALVRRFWKVNNYVVYNHQEAGKYENHTENAL
FT                   LLYMACTHASNPVYATLKIRIYFYDSITN"
XX
SQ   Sequence 756 BP; 200 A; 167 C; 198 G; 191 T; 0 other;

he967558 Length: 756  12-APR-2013  Type: N  Check: 3448  ..

       1  atggttaagc gggatgcccc atggcgttta atggcgggga cctccaaggt
      51  ttcccgctca gctaattatt cacgtggcac gggtatgggc cctaaatttg
     101  ataaggccgc tgcttgggtt aacaggccca tgtacaggaa gcccaggata
     151  tatcgaacgt ttagaagccc agatgtgcct agaggttgtg aagggccttg
     201  taaggtccag tcattcgagc agcggcatga tatttcccat gttggcaagg
     251  tcatgtgcat ttcggacgtg acacgtggta acggtattac tcatcgtgta
     301  ggcaagcgtt tctgcgtcaa gtctgcatac gttctgggta agatatggat
     351  ggacgagaat atcaagctca agaaccacac caacagcgtc atgttctggc
     401  tcgtgagaga taggagacca tatggtaccc ctatggattt tggtcaggtg
     451  ttcaacatgt atgacaacga gcctagcaca gccaccgtga agaacgatct
     501  gcgtgatcgt ttccaagtca tgcacaggtt ctccgctaag gtcacaggtg
     551  gacagtatgc cagcaacgag caggcgttgg ttaggcgttt ctggaaggta
     601  aacaactacg tcgtctacaa ccaccaggaa gctggcaaat acgagaatca
     651  tactgagaac gctctgttat tgtatatggc atgtactcat gcctctaacc
     701  ctgtgtacgc gacattgaaa attcgaatct atttttatga ttcgataaca
     751  aattaa