Sequence of DPV Pepper golden mosaic virus

Pepper golden mosaic virus cp gene for coat protein, isolate PGLIB26C2009

ACC No: HE967571

Dated: 2013-04-12 | Length: 756 | CRC: 552480463

                
ID   HE967571; SV 1; linear; genomic DNA; STD; VRL; 756 BP.
XX
AC   HE967571;
XX
DT   05-OCT-2012 (Rel. 114, Created)
DT   12-APR-2013 (Rel. 116, Last updated, Version 2)
XX
DE   Pepper golden mosaic virus cp gene for coat protein, isolate PGLIB26C2009
XX
KW   .
XX
OS   Pepper golden mosaic virus
OC   Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
XX
RN   [1]
RP   1-756
RA   Fraile A.;
RT   ;
RL   Submitted (20-JUL-2012) to the INSDC.
RL   Biotecnologia, Centro de Biotecnologia y Genomica de Plantas UPM-, Campus
RL   de Montegancedo, E-28223 Pozuelo de Alarcon (Madrid), SPAIN.
XX
RN   [2]
RX   DOI; 10.1111/mec.12232.
RX   PUBMED; 23379795.
RA   Rodelo-Urrego M., Pagan I., Gonzalez-Jara P., Betancourt M.,
RA   Moreno-Letelier A., Ayllon M.A., Fraile A., Pinero D., Garcia-Arenal F.;
RT   "Landscape heterogeneity shapes host-parasite interactions and results in
RT   apparent plant-virus codivergence";
RL   Mol. Ecol. 22(8):2325-2340(2013).
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .756
FT                   /organism="Pepper golden mosaic virus"
FT                   /host="Capsicum annuum var. glabriusculum (chiltepin)"
FT                   /isolate="PGLIB26C2009"
FT                   /mol_type="genomic DNA"
FT                   /country="Mexico:Nayarit, La Libertad"
FT                   /isolation_source="Monoculture"
FT                   /collection_date="2009"
FT                   /db_xref="taxon:223301"
FT   CDS             1. .756
FT                   /transl_table=1
FT                   /gene="cp"
FT                   /product="coat protein"
FT                   /db_xref="GOA:Q3MJQ2"
FT                   /db_xref="InterPro:IPR000263"
FT                   /db_xref="InterPro:IPR000650"
FT                   /db_xref="UniProtKB/TrEMBL:Q3MJQ2"
FT                   /protein_id="CCJ67892.1"
FT                   /translation="MVKRDAPWRLMAGTSKVSRSANYSRGTGMGPKFDKAAAWVNRPMY
FT                   RKPRIYRTFRSPDVPRGCEGPCKVQSFEQRHDISHVGKVMCISDVTRGNGITHRVGKRF
FT                   CVKSAYVLGKIWMDENIKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNMYDNEPSTATV
FT                   KNDLRDRYQVMHRFSAKVTGGQYASNEQALVRRFWKVNNYVVYNHQEAGKYENHTENAL
FT                   LLYMACTHASNPVYATLKIRIYFYDSITN"
XX
SQ   Sequence 756 BP; 202 A; 164 C; 202 G; 188 T; 0 other;

he967571 Length: 756  12-APR-2013  Type: N  Check: 3290  ..

       1  atggttaagc gggatgcccc atggcgttta atggcgggga cctccaaggt
      51  ttcccgctca gctaattatt cacgtggcac gggtatgggc cctaaattcg
     101  ataaggccgc tgcttgggtt aacaggccca tgtacaggaa gcccaggatt
     151  tatcggacgt ttagaagccc agatgttcct agaggttgtg aagggccttg
     201  taaagtccag tcattcgagc agcggcatga tatctcccat gtagggaagg
     251  taatgtgcat ttcggacgtg acacgtggta atggtatcac tcatcgtgta
     301  ggcaagcgtt tctgcgtgaa gtctgcatac gttctgggta agatatggat
     351  ggacgagaat atcaagctca agaaccacac caacagcgtc atgttctggc
     401  tcgtgagaga taggagacca tatggtaccc ctatggattt tggtcaggtg
     451  ttcaacatgt atgacaacga gcctagcaca gccactgtga agaacgatct
     501  gcgtgatcgt taccaagtca tgcacaggtt ctccgctaag gtcacaggtg
     551  gacagtatgc cagcaacgag caggcgttgg ttaggcgttt ctggaaggtg
     601  aacaactacg tggtctacaa ccaccaggaa gctggcaaat acgagaatca
     651  tactgagaac gcgctgttat tgtatatggc atgtactcat gcatccaacc
     701  ctgtgtacgc gacattgaaa attcgaatct atttttatga ttcgataaca
     751  aattaa