Sequence of DPV Pepper golden mosaic virus

Pepper golden mosaic virus cp gene for coat protein, isolate PGPOT12C2009

ACC No: HE967575

Dated: 2013-04-12 | Length: 756 | CRC: 1017720457

                
ID   HE967575; SV 1; linear; genomic DNA; STD; VRL; 756 BP.
XX
AC   HE967575;
XX
DT   05-OCT-2012 (Rel. 114, Created)
DT   12-APR-2013 (Rel. 116, Last updated, Version 2)
XX
DE   Pepper golden mosaic virus cp gene for coat protein, isolate PGPOT12C2009
XX
KW   .
XX
OS   Pepper golden mosaic virus
OC   Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
XX
RN   [1]
RP   1-756
RA   Fraile A.;
RT   ;
RL   Submitted (20-JUL-2012) to the INSDC.
RL   Biotecnologia, Centro de Biotecnologia y Genomica de Plantas UPM-, Campus
RL   de Montegancedo, E-28223 Pozuelo de Alarcon (Madrid), SPAIN.
XX
RN   [2]
RX   DOI; 10.1111/mec.12232.
RX   PUBMED; 23379795.
RA   Rodelo-Urrego M., Pagan I., Gonzalez-Jara P., Betancourt M.,
RA   Moreno-Letelier A., Ayllon M.A., Fraile A., Pinero D., Garcia-Arenal F.;
RT   "Landscape heterogeneity shapes host-parasite interactions and results in
RT   apparent plant-virus codivergence";
RL   Mol. Ecol. 22(8):2325-2340(2013).
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .756
FT                   /organism="Pepper golden mosaic virus"
FT                   /host="Capsicum annuum var. glabriusculum (chiltepin)"
FT                   /isolate="PGPOT12C2009"
FT                   /mol_type="genomic DNA"
FT                   /country="Mexico:Sinaloa, El Potrero"
FT                   /isolation_source="Home Garden"
FT                   /collection_date="2009"
FT                   /db_xref="taxon:223301"
FT   CDS             1. .756
FT                   /transl_table=1
FT                   /gene="cp"
FT                   /product="coat protein"
FT                   /db_xref="GOA:K0N610"
FT                   /db_xref="InterPro:IPR000263"
FT                   /db_xref="InterPro:IPR000650"
FT                   /db_xref="UniProtKB/TrEMBL:K0N610"
FT                   /protein_id="CCJ67896.1"
FT                   /translation="MVKRDAPWRLMAGTAKVSRSGNYSRGTGMGPKFDKAAAWVNRPMY
FT                   RKPRIYRTYRSPDVPRGCEGPCKVQSFEQRHDISHVGKVKLISDVTRGNGITHRVGKRF
FT                   CVKSAYVLGKIWMDENIKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNMYDNEPSTATV
FT                   KNDLRDRFQVMHRFSAKVTGGQYASNEQALVRRFWKVNNYVVYNHQEAGKYENHTENAL
FT                   LLYMACTHASNPVYATLKIRIYFYDSITN"
XX
SQ   Sequence 756 BP; 201 A; 159 C; 206 G; 190 T; 0 other;

he967575 Length: 756  12-APR-2013  Type: N  Check: 3462  ..

       1  atggttaagc gggatgcccc atggcgttta atggcgggga ccgcaaaggt
      51  ttcccgctca ggtaattatt cacgtggcac gggtatgggc cctaaatttg
     101  ataaggccgc tgcttgggtt aacaggccca tgtacaggaa gcccaggata
     151  tatcggacgt atagaagccc agatgtgcct agaggttgtg aagggccttg
     201  taaggtccag tccttcgagc agcggcatga tatttcccat gttgggaagg
     251  ttaaattgat ttcggacgtg acacgtggta atggtatcac tcatcgtgta
     301  gggaagcgtt tctgcgtcaa gtctgcatac gttctgggta agatatggat
     351  ggacgagaat atcaagctca agaaccacac caacagcgtc atgttctggc
     401  tcgtgagaga taggagacca tatggtaccc ccatggattt cggtcaagtg
     451  ttcaacatgt atgacaacga gcccagtact gccactgtga agaacgatct
     501  gcgtgatcgt ttccaagtta tgcacaggtt ctcggctaag gtaactggtg
     551  ggcagtacgc cagcaacgag caggcattgg ttaggcgatt ctggaaggtg
     601  aacaactacg tcgtgtacaa ccatcaggaa gctggcaagt acgagaatca
     651  tacggagaac gccctgttat tgtatatggc atgtactcat gcctctaatc
     701  ctgtgtacgc gacattgaaa attcgaatct atttttatga ttcgataaca
     751  aattaa