Sequence of DPV Pepper huasteco yellow vein virus

Pepper huasteco yellow vein virus cp gene for coat protein, isolate PHCHO02C2009

ACC No: HE967656

Dated: 2013-04-12 | Length: 756 | CRC: 1544256791

                
ID   HE967656; SV 1; linear; genomic DNA; STD; VRL; 756 BP.
XX
AC   HE967656;
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DT   05-OCT-2012 (Rel. 114, Created)
DT   12-APR-2013 (Rel. 116, Last updated, Version 2)
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DE   Pepper huasteco yellow vein virus cp gene for coat protein, isolate
DE   PHCHO02C2009
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KW   .
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OS   Pepper huasteco yellow vein virus
OC   Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
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RN   [1]
RP   1-756
RA   Fraile A.;
RT   ;
RL   Submitted (20-JUL-2012) to the INSDC.
RL   Biotecnologia, Centro de Biotecnologia y Genomica de Plantas UPM-, Campus
RL   de Montegancedo, E-28223 Pozuelo de Alarcon (Madrid), SPAIN.
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RN   [2]
RX   DOI; 10.1111/mec.12232.
RX   PUBMED; 23379795.
RA   Rodelo-Urrego M., Pagan I., Gonzalez-Jara P., Betancourt M.,
RA   Moreno-Letelier A., Ayllon M.A., Fraile A., Pinero D., Garcia-Arenal F.;
RT   "Landscape heterogeneity shapes host-parasite interactions and results in
RT   apparent plant-virus codivergence";
RL   Mol. Ecol. 22(8):2325-2340(2013).
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FH   Key             Location/Qualifiers
FH
FT   source          1. .756
FT                   /organism="Pepper huasteco yellow vein virus"
FT                   /host="Capsicum annuum var. glabriusculum (chiltepin)"
FT                   /isolate="PHCHO02C2009"
FT                   /mol_type="genomic DNA"
FT                   /country="Mexico:Yucatan, Cholul"
FT                   /isolation_source="Home Garden"
FT                   /collection_date="2009"
FT                   /db_xref="taxon:223303"
FT   CDS             1. .756
FT                   /transl_table=1
FT                   /gene="cp"
FT                   /product="coat protein"
FT                   /db_xref="GOA:K0N3Q8"
FT                   /db_xref="InterPro:IPR000263"
FT                   /db_xref="InterPro:IPR000650"
FT                   /db_xref="UniProtKB/TrEMBL:K0N3Q8"
FT                   /protein_id="CCJ67977.1"
FT                   /translation="MPKREAPWRLTAGTTKISRTGNNSRALIMGPSTSRASAWVNRPMY
FT                   RKPRIYRMYRSPDVPKGCEGPCKVQSFEQRHDVSHVGKVICISDVTRGNGITHRVGKRF
FT                   CVKSVYILGKIWMDENIKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNMYDNEPSTATV
FT                   KNDLRDRYQVMHRFYAKVTGGQYASNEQALVRRFWKVNNHVVYNHQEAGKYENHTENAL
FT                   LLYMACTHASNPVYATLKIRVYFYDSIMN"
XX
SQ   Sequence 756 BP; 206 A; 158 C; 191 G; 201 T; 0 other;

he967656 Length: 756  12-APR-2013  Type: N  Check: 5551  ..

       1  atgcctaagc gtgaggcccc ttggcgatta acggcgggca ccacaaagat
      51  tagccgaact ggcaacaatt cacgggctct tatcatgggc ccgagtacta
     101  gcagggcctc agcttgggtt aatcgcccaa tgtacaggaa gccccggatt
     151  taccgtatgt acagatcgcc ggatgtgccg aaaggttgtg aagggccgtg
     201  taaggtccaa tcgtttgaac aacgacatga tgtctctcat gttggtaagg
     251  ttatttgtat atccgacgtc actcgcggta atggtattac ccatcgtgtt
     301  ggcaagcgat tctgcgttaa gtccgtctat attctgggca aaatctggat
     351  ggatgaaaat attaagttga agaaccacac caacagtgtc atgttttggt
     401  tggttaggga taggagaccc tacggtacgc ctatggattt tggccaagtg
     451  tttaacatgt atgacaacga gccaagtacc gctactgtga agaacgatct
     501  tcgggatcgt taccaagtta tgcatagatt ctatgctaag gtcactggtg
     551  gtcaatatgc cagcaacgag caagccttgg ttaggcgttt ctggaaggtg
     601  aacaaccacg ttgtgtataa ccatcaagaa gctgggaaat atgagaacca
     651  caccgagaat gcgctgttat tgtatatggc atgtactcat gcatctaatc
     701  ccgtgtatgc aacacttaaa attcgggtct atttttatga ctcgataatg
     751  aattaa