Sequence of DPV Pepper huasteco yellow vein virus

Pepper huasteco yellow vein virus cp gene for coat protein, isolate PHLIB113C2009

ACC No: HE967693

Dated: 2013-04-12 | Length: 756 | CRC: 385833133

                
ID   HE967693; SV 1; linear; genomic DNA; STD; VRL; 756 BP.
XX
AC   HE967693;
XX
DT   05-OCT-2012 (Rel. 114, Created)
DT   12-APR-2013 (Rel. 116, Last updated, Version 2)
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DE   Pepper huasteco yellow vein virus cp gene for coat protein, isolate
DE   PHLIB113C2009
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KW   .
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OS   Pepper huasteco yellow vein virus
OC   Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
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RN   [1]
RP   1-756
RA   Fraile A.;
RT   ;
RL   Submitted (20-JUL-2012) to the INSDC.
RL   Biotecnologia, Centro de Biotecnologia y Genomica de Plantas UPM-, Campus
RL   de Montegancedo, E-28223 Pozuelo de Alarcon (Madrid), SPAIN.
XX
RN   [2]
RX   DOI; 10.1111/mec.12232.
RX   PUBMED; 23379795.
RA   Rodelo-Urrego M., Pagan I., Gonzalez-Jara P., Betancourt M.,
RA   Moreno-Letelier A., Ayllon M.A., Fraile A., Pinero D., Garcia-Arenal F.;
RT   "Landscape heterogeneity shapes host-parasite interactions and results in
RT   apparent plant-virus codivergence";
RL   Mol. Ecol. 22(8):2325-2340(2013).
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .756
FT                   /organism="Pepper huasteco yellow vein virus"
FT                   /host="Capsicum annuum var. glabriusculum (chiltepin)"
FT                   /isolate="PHLIB113C2009"
FT                   /mol_type="genomic DNA"
FT                   /country="Mexico:Nayarit, La Libertad"
FT                   /isolation_source="Monoculture"
FT                   /collection_date="2009"
FT                   /db_xref="taxon:223303"
FT   CDS             1. .756
FT                   /transl_table=1
FT                   /gene="cp"
FT                   /product="coat protein"
FT                   /db_xref="GOA:K0N0M7"
FT                   /db_xref="InterPro:IPR000263"
FT                   /db_xref="InterPro:IPR000650"
FT                   /db_xref="UniProtKB/TrEMBL:K0N0M7"
FT                   /protein_id="CCJ68014.1"
FT                   /translation="MPKRDAPWRLTAGTAKISRTGNSSRALIMGPTTSRASAWVNRPMY
FT                   RKPRIYRMYRSPDVPKGCEGPCKVQSFEQRHDVSHVGKVICISDVTRGNGITHRVGKRF
FT                   CVKSVYILGKIWMDENIKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNMYDNEPSTATV
FT                   KNDLRDRFQVMHRFYAKVTGGQYASNEQALVRRFWKVNNHVVYNHQEAGKYENHTENAL
FT                   LLYMACTHASNPVYATLKIRVYFYDSIMN"
XX
SQ   Sequence 756 BP; 200 A; 159 C; 194 G; 203 T; 0 other;

he967693 Length: 756  12-APR-2013  Type: N  Check: 7147  ..

       1  atgcctaagc gtgatgctcc atggcgatta acggcgggga ccgccaagat
      51  tagccgaact ggcaatagtt cgcgggctct tatcatgggc ccgactacca
     101  gcagggcctc agcttgggtt aatcgcccaa tgtacaggaa gccccggatt
     151  tatcgtatgt acagatctcc ggatgtgccg aagggttgtg aagggccgtg
     201  taaggtccaa tcgtttgagc aacgacatga tgtctctcat gttggtaagg
     251  ttatttgtat atccgacgtc actcgcggta atggtattac ccatcgtgtt
     301  ggcaaacgat tctgcgttaa gtccgtctat attctgggca aaatctggat
     351  ggatgaaaat attaagttga agaaccacac caacagtgtc atgttttggt
     401  tggttaggga taggagaccc tacggtacgc ctatggattt tggccaagtc
     451  tttaacatgt acgacaacga gcccagtacc gctactgtga agaacgatct
     501  tcgggatcgt tttcaagtta tgcatagatt ctatgctaag gtcactggtg
     551  ggcaatatgc cagcaacgag caagctttgg ttaggcgttt ctggaaggta
     601  aacaaccatg ttgtgtacaa ccatcaggag gctggcaaat atgagaacca
     651  cacagaaaat gcgctgttat tgtatatggc atgtactcat gcatctaatc
     701  ccgtgtatgc aacgctgaaa attcgggtct atttttacga ctcgataatg
     751  aattaa