Sequence of DPV Pepper huasteco yellow vein virus

Pepper huasteco yellow vein virus cp gene for coat protein, isolate PHHUJ27C2009

ACC No: HE967699

Dated: 2013-04-12 | Length: 756 | CRC: 1011259614

                
ID   HE967699; SV 1; linear; genomic DNA; STD; VRL; 756 BP.
XX
AC   HE967699;
XX
DT   05-OCT-2012 (Rel. 114, Created)
DT   12-APR-2013 (Rel. 116, Last updated, Version 2)
XX
DE   Pepper huasteco yellow vein virus cp gene for coat protein, isolate
DE   PHHUJ27C2009
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KW   .
XX
OS   Pepper huasteco yellow vein virus
OC   Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
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RN   [1]
RP   1-756
RA   Fraile A.;
RT   ;
RL   Submitted (20-JUL-2012) to the INSDC.
RL   Biotecnologia, Centro de Biotecnologia y Genomica de Plantas UPM-, Campus
RL   de Montegancedo, E-28223 Pozuelo de Alarcon (Madrid), SPAIN.
XX
RN   [2]
RX   DOI; 10.1111/mec.12232.
RX   PUBMED; 23379795.
RA   Rodelo-Urrego M., Pagan I., Gonzalez-Jara P., Betancourt M.,
RA   Moreno-Letelier A., Ayllon M.A., Fraile A., Pinero D., Garcia-Arenal F.;
RT   "Landscape heterogeneity shapes host-parasite interactions and results in
RT   apparent plant-virus codivergence";
RL   Mol. Ecol. 22(8):2325-2340(2013).
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .756
FT                   /organism="Pepper huasteco yellow vein virus"
FT                   /host="Capsicum annuum var. glabriusculum (chiltepin)"
FT                   /isolate="PHHUJ27C2009"
FT                   /mol_type="genomic DNA"
FT                   /country="Mexico:Sinaloa, El Huajote"
FT                   /isolation_source="Home Garden"
FT                   /collection_date="2009"
FT                   /db_xref="taxon:223303"
FT   CDS             1. .756
FT                   /transl_table=1
FT                   /gene="cp"
FT                   /product="coat protein"
FT                   /db_xref="GOA:K0N0Z6"
FT                   /db_xref="InterPro:IPR000263"
FT                   /db_xref="InterPro:IPR000650"
FT                   /db_xref="UniProtKB/TrEMBL:K0N0Z6"
FT                   /protein_id="CCJ68020.1"
FT                   /translation="MPKRDAPWRLTAGTAKISRTGNSSRALIMGPTTSRASAWVNRPMY
FT                   RKPRIYRMYRSPDVPKGCEGPCKVQSFEQRHDVSHVGKVICISDVTRGNGITHRVGKRF
FT                   CVKSVYILGKIWMDENIKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNMYDNEPSTATV
FT                   KNDLRDRYQVMHRFYAKVTGGQYASNEQALVRRFWKVNNHVVYNHQEAGKYENHTENAL
FT                   LLYMACTHASNPVYATLKIRVYFYDSIMN"
XX
SQ   Sequence 756 BP; 207 A; 160 C; 192 G; 197 T; 0 other;

he967699 Length: 756  12-APR-2013  Type: N  Check: 3872  ..

       1  atgcctaagc gtgatgctcc ttggcgatta acggcgggga ccgccaagat
      51  tagccgaact ggcaatagtt cgcgggctct tatcatgggc ccgactacta
     101  gcagggcctc agcttgggtt aatcgcccaa tgtacaggaa gccccggatt
     151  tatcgtatgt acagatctcc ggatgtgccg aaaggttgtg aagggccgtg
     201  taaggtccaa tcgtttgagc aacgacatga tgtctctcat gttggtaagg
     251  ttatttgtat atccgacgtg actcgtggta atggaattac ccatcgtgtt
     301  ggcaaacgat tctgcgttaa gtccgtctat attcttggca aaatctggat
     351  ggatgaaaat attaaattga agaaccacac caacagcgtc atgttctggt
     401  tggtaaggga taggagaccc tacggtacgc ctatggattt tggccaagtg
     451  ttcaacatgt acgacaacga gcccagtacc gctactgtga agaacgatct
     501  tcgtgatcgt tatcaagtca tgcacagatt ctatgctaag gtgacgggtg
     551  gacaatatgc cagcaacgag caagccttag ttaggcgttt ctggaaggta
     601  aacaaccatg tggtgtacaa ccatcaggag gctggcaaat atgagaacca
     651  cacagaaaat gcgctattat tgtatatggc atgtactcat gcatctaatc
     701  ccgtgtatgc aacgctgaaa attcgggtct atttttacga ctcgataatg
     751  aattaa