Sequence of DPV Tomato leaf curl Karnataka virus

Tomato leaf curl Karnataka virus AC3 gene for replication enhancer protein, isolate Mentha, clone M2

ACC No: HF563619

Dated: 2013-02-24 | Length: 1097 | CRC: -2010401025

                
ID   HF563619; SV 1; linear; genomic DNA; STD; VRL; 1097 BP.
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AC   HF563619;
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DT   24-FEB-2013 (Rel. 115, Created)
DT   24-FEB-2013 (Rel. 115, Last updated, Version 1)
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DE   Tomato leaf curl Karnataka virus AC3 gene for replication enhancer protein,
DE   isolate Mentha, clone M2
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KW   .
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OS   Tomato leaf curl Karnataka virus
OC   Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
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RN   [1]
RP   1-1097
RA   Afzal Z.;
RT   ;
RL   Submitted (29-NOV-2012) to the INSDC.
RL   Afzal Z., Agricultural biotechnology division, NIBGE, Jhang road,
RL   Faisalabad, PO Box 577, 38000, PAKISTAN.
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RN   [2]
RA   Afzal Z., Tahir N., Amin I., Mansoor S.;
RT   "Leaf curl disease of mint in Pakistan is associated with multiple
RT   begomoviruses and cotton leaf curl Multan betasatellite";
RL   Unpublished.
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FH   Key             Location/Qualifiers
FH
FT   source          1. .1097
FT                   /organism="Tomato leaf curl Karnataka virus"
FT                   /isolate="Mentha"
FT                   /mol_type="genomic DNA"
FT                   /country="Pakistan:Faisalabad"
FT                   /isolation_source="Mentha"
FT                   /collected_by="Zunaira Afzal"
FT                   /collection_date="23-Dec-2010"
FT                   /clone="M2"
FT                   /db_xref="taxon:220932"
FT   CDS             12. .416
FT                   /gene="AC3"
FT                   /product="replication enhancer protein"
FT                   /protein_id="CCP28687.1"
FT                   /translation="MDSRTGEPIIAAQAENGVFIWEIQNPLYFKITEHHNRPFLMNHDI
FT                   ITVQIQFNHNLRKALGIHKCFLAFRIWTTSQPQIGHFLRVFKTQVFKYLDHLGVISINN
FT                   VIRAVDHVLWNVLHHVVNVEQSSSIKFNLY"
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SQ   Sequence 1097 BP; 318 A; 281 C; 200 G; 298 T; 0 other;

hf563619 Length: 1097  24-FEB-2013  Type: N  Check: 8373  ..

       1  ctgccacaac catggattca cgcacagggg aacccatcat tgcagctcaa
      51  gcagagaatg gcgtgtttat ctgggagatt caaaatcccc tctatttcaa
     101  gataacagag caccacaacc ggccatttct catgaaccac gacatcatca
     151  ccgtccagat acagttcaat cacaacctga ggaaagcact ggggattcac
     201  aaatgtttcc tagccttccg aatctggacg acctcacagc ctcagattgg
     251  tcatttctta agggtcttta agacccaagt gtttaagtat ttagatcatt
     301  taggggttat aagtattaac aatgtaatta gggcagttga tcatgtatta
     351  tggaatgtat tacatcatgt tgtaaatgta gaacaatcct cttcaataaa
     401  attcaatctt tattaattcg atactgaatc atagaagtag atccgtatct
     451  tcaatgtagc atacacagga ttagaggcgt gagtacacgc catatacaac
     501  atcaacgcat tttcagaatg attctcatat ttgccagcct cttgctggtt
     551  atacacgaca taattattaa ctctaataaa cttcttcacg agagcctgct
     601  ccttggatgc atattgacca ccggtgacag ttgcatgcca ctttctcagc
     651  acctgatacc tatcacgatg aacattcttc acagtcgccg tactgggctc
     701  attatcaaac atattaaaaa cctcaccaaa atcctgaggt ttgtcaacgg
     751  gcctccgatc cctaacaaga aaaaacataa cactattcgt gtgattctta
     801  gtcttgatgt tctcatccat ccagaccttg cccagaacat aaacggactt
     851  aacacagaac ctcttgccaa ccctgtgggt cagcccaata ccacgagtaa
     901  catcactaac acacatgact ttcccaatat gctggatatc atgtctggac
     951  tcaaatgact ggaccttgca cgggccttca catcccctcg gaacatctgg
    1001  acttctgtac atcctgtaca tcctgggctt tctgttcatg ggcctgttcg
    1051  cccatgccct tgccttcgtg acgcggacaa tgggggcagc agcacgg