Sequence of DPV Tomato yellow leaf curl virus

Tomato yellow leaf curl virus AV2 gene and partial AV1 gene, isolate HNZZ11-5

ACC No: HF674964

Dated: 2013-02-05 | Length: 541 | CRC: -82234982

                
ID   HF674964; SV 1; linear; genomic DNA; STD; VRL; 541 BP.
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AC   HF674964;
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DT   05-FEB-2013 (Rel. 115, Created)
DT   05-FEB-2013 (Rel. 115, Last updated, Version 1)
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DE   Tomato yellow leaf curl virus AV2 gene and partial AV1 gene, isolate
DE   HNZZ11-5
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KW   .
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OS   Tomato yellow leaf curl virus
OC   Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
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RN   [1]
RP   1-541
RA   Zhou X.;
RT   ;
RL   Submitted (31-JAN-2013) to the INSDC.
RL   Zhou X., Zhejiang University, Institute of Biotechnology, No.268 Kuaixuan
RL   Road, Hangzhou, Zhejiang 310029, CHINA.
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RN   [2]
RA   Jiao X., Xie Y., Zhou X.;
RT   "Pathogen analysis of Tomato yellow leaf curl disease in China";
RL   Unpublished.
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FH   Key             Location/Qualifiers
FH
FT   source          1. .541
FT                   /organism="Tomato yellow leaf curl virus"
FT                   /isolate="HNZZ11-5"
FT                   /mol_type="genomic DNA"
FT                   /country="China:Henan"
FT                   /collection_date="2011"
FT                   /db_xref="taxon:10832"
FT   CDS             155. .505
FT                   /gene="AV2"
FT                   /product="AV2 protein"
FT                   /protein_id="CCQ77569.1"
FT                   /translation="MWDPLLNEFPESVHGFRCMLAIKYLQSVEETYEPNTLGHDLIRDL
FT                   ISVVRARDYVEATRRYNHFHARLEGPPKAELRQPIQQPCCCPHCPRHKQATIMDVQAHV
FT                   PEAQNTQNVSKP"
FT   CDS             315. .>541
FT                   /gene="AV1"
FT                   /product="AV1 protein"
FT                   /function="coat protein"
FT                   /protein_id="CCQ77570.1"
FT                   /translation="MSKRPGDIIISTPVSKVRRRLNFDSPYSSRAAVPIVQGTNKRRSW
FT                   TYRPMYRKPRIHRMYRSPDVPRGCEGPCKV"
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SQ   Sequence 541 BP; 140 A; 135 C; 120 G; 146 T; 0 other;

hf674964 Length: 541  05-FEB-2013  Type: N  Check: 9245  ..

       1  taatattacc ggagggccgc gccttttctt tttacgtggt ccccacgagg
      51  gttacacaga cgttaccgtc aaccaatcaa attgcatcct caaacgttag
     101  ataagtgttc atttgtcttt atatacttgg tccccaagta gtttgtcttg
     151  cactatgtgg gatccacttc taaatgaatt tcctgaatct gttcacggat
     201  ttcgttgtat gttagctatt aaatatttgc agtccgttga ggaaacttac
     251  gagcccaata cattgggcca cgatttaatt agggatctta tatctgttgt
     301  aagggcccga gactatgtcg aagcgaccag gcgatataat catttccacg
     351  cccgtctcga aggtccgccg aaggctgaac ttcgacagcc catacagcag
     401  ccgtgctgct gtccccattg tccaaggcac aaacaagcga cgatcatgga
     451  cgtacaggcc catgtaccgg aagcccagaa tacacagaat gtatcgaagc
     501  cctgatgttc ctcgtggatg tgaaggccca tgcaaagtcc a