Sequence of DPV Tobacco curly shoot virus
Tobacco curly shoot virus complete genome, isolate Y-T8
ACC No: HG003650
Dated: 2013-05-28 | Length: 2743 | CRC: -329550157
ID HG003650; SV 1; circular; genomic DNA; STD; VRL; 2743 BP.
XX
AC HG003650;
XX
DT 28-MAY-2013 (Rel. 116, Created)
DT 28-MAY-2013 (Rel. 116, Last updated, Version 1)
XX
DE Tobacco curly shoot virus complete genome, isolate Y-T8
XX
KW complete genome.
XX
OS Tobacco curly shoot virus
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
XX
RN [1]
RP 1-2743
RA Zhou X.;
RT ;
RL Submitted (04-MAY-2013) to the INSDC.
RL Zhou X., Zhejiang University, Institute of Biotechnology, No.268 Kuaixuan
RL Road, Hangzhou, Zhejiang 310029, CHINA.
XX
RN [2]
RA Xie Y., Zhou X.;
RT "Etiology of Ageratum yellow vein diseases in South China";
RL Unpublished.
XX
FH Key Location/Qualifiers
FH
FT source 1. .2743
FT /organism="Tobacco curly shoot virus"
FT /isolate="Y-T8"
FT /mol_type="genomic DNA"
FT /country="China:Yunnan"
FT /db_xref="taxon:180526"
FT CDS 134. .481
FT /transl_table=1
FT /gene="AV2"
FT /product="AV2 protein"
FT /protein_id="CDF47267.1"
FT /translation="MWDPLVNEFPETVHGFRCMLAVKYLQLVEKTYSPDTLGHDLIRDL
FT ISVIRARNYVEASSRYNHFHARFEGTPPSQLRQPICEPCCCPHCPRHQSKSMGEQAHEQ
FT KTQDVQDVQKS"
FT CDS 294. .1064
FT /transl_table=1
FT /gene="AV1"
FT /product="coat protein"
FT /protein_id="CDF47268.1"
FT /translation="MSKRPADIIISTPASKVRRRLNFDSPYVSRAAAPIVRVTKARAWA
FT NRPMNRKPRMYRMYRSPDVPRGCEGPCKVQSFESRHDIQHIGKVMCVSDVTRGTGLTHR
FT VGKRFCVKSVYVLGKIWMDENIKTKNHTNSVMFFLVRDRRPVDKPQDFGEVFNMFDNEP
FT STATVKNVHRDRYQVLRKWHATVTGGQYASKEQALVKKFVRVNNYVVYNQQEAGKYENH
FT SENALMLYMACTHASNPVYATLKIRIYFYDSVTN"
FT CDS complement(1061. .1465)
FT /transl_table=1
FT /gene="AC3"
FT /product="AC3 protein"
FT /protein_id="CDF47269.1"
FT /translation="MDSRTGELITAAQAENGVYIWEIQNPLYFKIIEHQNRPFLMKEDI
FT ITIQIQFNYNLRKALGVHKCFLVYRIWMTSQPQTGRFLRVFKTQVYKYLNNLGIISINN
FT VIRAVDHVLWDLLEHIVYVDQSYSIKFNIY"
FT CDS complement(1206. .1610)
FT /transl_table=1
FT /gene="AC2"
FT /product="AC2 protein"
FT /protein_id="CDF47270.1"
FT /translation="MRSSSPSKAHSTQVPIKVKHRLAKKGNRRRRVDLPCGCSYFIALA
FT CHDHGFTHRGTHHCSSSREWRVYLGDSKSPLFQDNRAPEPSISHERRHNNHPNTVQLQP
FT AESSGSAQVFSSLPNLDDFTASDWSFLKGL"
FT CDS complement(1513. .2598)
FT /transl_table=1
FT /gene="AC1"
FT /product="Rep"
FT /protein_id="CDF47271.1"
FT /translation="MAPPNKFRINAKNYFLTYPHCSLTKEEALSQIQALETPTNKLFIR
FT ICRELHEDGTPHLHVLIQFEGKFQCKNQRFFDLTSPTRSAHFHPNIQGAKSSTDVKAYM
FT EKDGDVLDHGIFQIDARSARGGCQSANDAYAEAINSGSKAAALNILKEKAPKDFVLQFH
FT NLNSNLDRIFTPPVEVYVSPFLSSSFDQVPEELDEWAAENVVSAAARPLRPISIVIEGD
FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYNNDAWYNVIDDVDPHYLKHFKEFMGAQRDW
FT QSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEFLDEEKNTALKNWALKNAIFVTLESPL
FT YSGSNQSEAQASQEGEQTSSC"
FT CDS complement(2148. .2447)
FT /transl_table=1
FT /gene="AC4"
FT /product="AC4 protein"
FT /protein_id="CDF47272.1"
FT /translation="MKMGLLTCMSSSNSKENSSVKIKDSSISHPQPDQHISIRTFRELK
FT AQQMLKHTWKKTETCLIMEFSRSMQDQLEEVANLPTTHMPRQSIQGPKQRPSIY"
XX
SQ Sequence 2743 BP; 754 A; 525 C; 605 G; 859 T; 0 other;
hg003650 Length: 2743 28-MAY-2013 Type: N Check: 1319 ..
1 accggatggc cgcgattttt tttaaagtgg gccccttgat gtgatatgtc
51 atccaatcaa aacgctcccc caaaacttaa ttgttttgtg gtcccttatt
101 tatacttgct caccaagtag tgcactccgc actatgtggg atccattagt
151 aaacgagttt cccgaaaccg ttcacggctt tcggtgtatg ttagcagtta
201 aatatctgca gttagtagag aagacttatt cgcctgacac attagggcac
251 gatttaatta gggatttaat ttcagttatt cgggctagaa attatgtcga
301 agcgtccagc agatataatc atttccacgc ccgcttcgaa ggtacgccgc
351 cgtctcaact tcgacagccc atatgtgagc cgtgctgctg cccccattgt
401 ccgcgtcacc aaagcaagag catgggcgaa caggcccatg aacagaaaac
451 ccaggatgta caggatgtac agaagtcctg atgtccctag aggatgtgaa
501 ggtccatgta aggtccagtc ttttgagtct agacatgaca ttcagcatat
551 aggtaaagtt atgtgtgtca gtgatgttac gcgtggaact gggctgactc
601 atcgagtggg taaaaggttt tgtgtaaaat ctgtttatgt cttgggtaag
651 atctggatgg atgaaaatat taagaccaag aatcacacta acagtgttat
701 gtttttttta gttagggatc gtaggcctgt ggataaacct caagattttg
751 gagaggtttt taacatgttt gataatgagc ccagtacggc tactgttaag
801 aatgttcatc gtgataggta tcaagtgctt cgcaaatggc atgcgactgt
851 tacgggtgga caatatgcgt cgaaggaaca agcccttgtg aagaagtttg
901 ttagggttaa taattatgtt gtgtataacc agcaagaagc tggcaagtat
951 gaaaatcatt ctgagaatgc gttaatgttg tatatggcat gtactcatgc
1001 ctctaaccct gtgtatgcta ctttgaagat acggatctat ttctatgatt
1051 ccgtaacaaa ttaataaata ttaaatttta ttgaataaga ttggtctaca
1101 tatacaatgt gttctaataa atcccataat acatgatcaa ctgcacgaat
1151 tacattattg atactgataa ttcctaaatt atttaaatat ttataaactt
1201 gagtcttaaa gacccttaag aaacgaccag tctgaggctg tgaagtcatc
1251 cagattcggt agactagaaa acacttgtgc actcccagag ctttccgcag
1301 gttgtagttg aactgtattt ggatggttat tatgtcttct ttcatgagaa
1351 atggacggtt ctggtgctct attatcttga aataaagggg attttgaatc
1401 tcccagatat acacgccatt ctctgcttga gctgcagtga tgagttcccc
1451 tgtgcgtgaa tccatgatcg tgacaggcta gtgctatgaa atatgaacat
1501 ccacaaggga gatcaacacg acgacgtctg ttccccttct tggctagcct
1551 gtgcttcact ttgattggaa cctgagtaga gtgggctttc gagggtgacg
1601 aagatcgcat tctttaaagc ccaattttta agtgctgtat ttttctcttc
1651 atccaagaat tctttatagc tagagttggg tcctggattg cagagaaaga
1701 tagtgggtat tccgccttta atttgaactg gctttccgta ctttgtattg
1751 ctttgccagt ctctttgggc ccccatgaat tctttaaagt gctttaggta
1801 gtgcggatcg acgtcatcaa tgacgttata ccaagcatca ttattgtaca
1851 ccttagggct tagatctaaa tgaccacaca agtaattatg tggtcccaat
1901 gacctggccc acatcgtctt ccctgttcta ctgtcacctt caattactat
1951 actaatgggt ctcaatggcc gcgcagcggc actgacgaca ttttcggcag
2001 cccactcatc aagttcttct ggaacttgat cgaaagaaga agataaaaaa
2051 ggagaaacat aaacctctac aggaggtgta aaaatcctat ctaaattaga
2101 atttaaatta tgaaactgta atacaaaatc tttaggagcc ttctccttta
2151 atatattgag ggccgctgct ttggaccctg aattgattgc ctcggcatat
2201 gcgtcgttgg cagattggca acctcctcta gctgatcttg catcgatctg
2251 gaaaattcca tgatcaagca cgtctccgtc tttttccatg tatgctttaa
2301 catctgttga gcttttagct ccctgaatgt tcggatggaa atgtgctgat
2351 ctggttgggg atgtgagatc gaagaatctt tgatttttac actggaattt
2401 tccttcgaat tggatgagga catgcaggtg aggagtccca tcttcatgga
2451 gttccctgca gattctgatg aataatttat tagttggtgt ttctagggct
2501 tgaatttggg aaagtgcctc ctctttagtg agagaacaat gtgggtatgt
2551 gagaaaatag tttttggcat ttattctgaa tttattagga ggagccattg
2601 actggtcaat cggtgtctct caaacttggc tatgcaatcg gtgtctggtg
2651 tcttatttat atgtggacac caaatggcat aattgtaatt tagtaaatga
2701 aattcaaaat tcaaaatcca aaagcggcca tccgtataat att