Sequence of DPV Cucumber mosaic virus

Cucumber mosaic virus isolate BB8 coat protein gene, complete cds.

ACC No: HM015286

Dated: 2010-10-31 | Length: 943 | CRC: -1192899929

                
ID   HM015286; SV 1; linear; genomic RNA; STD; VRL; 943 BP.
XX
AC   HM015286;
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DT   13-MAY-2010 (Rel. 104, Created)
DT   31-OCT-2010 (Rel. 106, Last updated, Version 2)
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DE   Cucumber mosaic virus isolate BB8 coat protein gene, complete cds.
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KW   .
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OS   Cucumber mosaic virus (cucumber mosaic cucumovirus)
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Bromoviridae;
OC   Cucumovirus.
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RN   [1]
RP   1-943
RA   Deng T.-C., Tsai C.-H., Tsai H.-L., Liao J.-Y., Huang W.-C.;
RT   "First Report of Cucumber mosaic virus on Vigna marina in Taiwan";
RL   Plant Dis. 94(10):1267-1267(2010).
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RN   [2]
RP   1-943
RA   Deng T.-C., Liao J.-Y.;
RT   ;
RL   Submitted (20-MAR-2010) to the EMBL/GenBank/DDBJ databases.
RL   Plant Pathology, Agricultural Research Institute, No.189, Jhongjheng Rd.,
RL   Wufong, Taichung, Taiwan 41301, R.O.C.
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FH   Key             Location/Qualifiers
FH
FT   source          1. .943
FT                   /organism="Cucumber mosaic virus"
FT                   /host="Vigna marina (beach pea)"
FT                   /isolate="BB8"
FT                   /mol_type="genomic RNA"
FT                   /country="Taiwan:Hualien City"
FT                   /lat_lon="23.97 N 121.62 E"
FT                   /collection_date="20-Apr-2009"
FT                   /db_xref="taxon:12305"
FT   CDS             146. .802
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /db_xref="GOA:D6QY04"
FT                   /db_xref="InterPro:IPR000247"
FT                   /db_xref="UniProtKB/TrEMBL:D6QY04"
FT                   /protein_id="ADG26754.1"
FT                   /translation="MDKSESTSAGRNRRRRPRRGSHSASSSADATFRVLSQQLSRLNKT
FT                   LAAGRPTINHPTFVGSERCKPGYTFTSITLKPPKIDRGSYYGKRLLLPDSVTEFDKKLV
FT                   SRIQIRVNPLPKFDSTVWVTVRKVPASSDLSVAAISAMFADGASPVLVYQYAASGVQAN
FT                   NKLLYDLSAMRADIGDMRKYAVLVYSKDDALETDELVLHVDIEHQRIPTSRVLPV"
XX
SQ   Sequence 943 BP; 197 A; 241 C; 227 G; 278 T; 0 other;

hm015286 Length: 943  31-OCT-2010  Type: N  Check: 5295  ..

       1  tttgaggttc aattcctctc gttccctgtt gggctccttt actttttcat
      51  ggatgcttct ccacgagatt gcgtttcgtc tacttatcct tagagtgttg
     101  tgttgtgtgt ttatctcttt gtgtgtagta ggatcgagtc gagtcatgga
     151  caaatctgaa tcaaccagtg ctggtcgcaa ccgtcgacgt cgtccgcgtc
     201  gcggttccca ctccgcttcc tcctctgcgg atgctacgtt tagagtcctg
     251  tcgcagcaac tttcgcgact taataagacg ttagcagctg gtcgtccaac
     301  tattaaccac ccaacctttg tgggtagtga acgctgtaaa cctggataca
     351  cgttcacatc tattaccctg aagccaccga aaatagaccg tgggtcttat
     401  tatggtaaaa ggttgttgct acctgattca gtcacggagt tcgataagaa
     451  gcttgtttcg cgcattcaaa ttcgagttaa tcctttgccg aaatttgatt
     501  ctaccgtgtg ggtgacagtc cggaaagttc ctgcctcctc ggacttatcc
     551  gttgccgcta tctctgctat gtttgcggac ggagcctcac cggtactggt
     601  gtatcagtat gccgcatctg gcgtccaagc caacaacaaa ctgttgtatg
     651  atctttcagc gatgcgcgct gatatcggtg acatgagaaa gtacgccgtc
     701  ctcgtgtatt caaaagacga tgcgctcgag acggacgagc tggtacttca
     751  tgtcgacatt gagcaccaac gcattcccac atctagggtg ctcccagttt
     801  gaacccgtgt ttgttttcca gaaccctccc tccgattctg tggcgggagc
     851  tgagttggta gtattgctct aaactacctg aggtcgctaa acgctctgcg
     901  gtgaacgggt tgtccatcca gcttacggct aaaatggtca gtc