Sequence of DPV Squash leaf curl China virus

Squash leaf curl China virus isolate SQLCCNV:Var:Chilli:09 coat protein (AV1) gene, complete cds.

ACC No: HM101172

Dated: 2010-05-19 | Length: 771 | CRC: -199922058

                
ID   HM101172; SV 1; linear; genomic DNA; STD; VRL; 771 BP.
XX
AC   HM101172;
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DT   19-MAY-2010 (Rel. 104, Created)
DT   19-MAY-2010 (Rel. 104, Last updated, Version 1)
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DE   Squash leaf curl China virus isolate SQLCCNV:Var:Chilli:09 coat protein
DE   (AV1) gene, complete cds.
XX
KW   .
XX
OS   Squash leaf curl China virus
OC   Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
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RN   [1]
RP   1-771
RA   Jaiswal N., Saritha R.K.;
RT   "Squash leaf curl China virus infecting Chilli in Varanasi, North India";
RL   Unpublished.
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RN   [2]
RP   1-771
RA   Jaiswal N., Saritha R.K.;
RT   ;
RL   Submitted (02-APR-2010) to the EMBL/GenBank/DDBJ databases.
RL   Virology, Indian Institute Of Vegetable Research, Varanasi, P/O Jakhini,
RL   Shahanshapur, Varanasi, U.P. 221305, India
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FH   Key             Location/Qualifiers
FH
FT   source          1. .771
FT                   /organism="Squash leaf curl China virus"
FT                   /host="chilli"
FT                   /isolate="SQLCCNV:Var:Chilli:09"
FT                   /mol_type="genomic DNA"
FT                   /country="India:Varanasi"
FT                   /collected_by="Namrata Jaiswal"
FT                   /collection_date="2009"
FT                   /db_xref="taxon:223323"
FT   gene            1. .771
FT                   /gene="AV1"
FT   CDS             1. .771
FT                   /codon_start=1
FT                   /gene="AV1"
FT                   /product="coat protein"
FT                   /protein_id="ADG63230.1"
FT                   /translation="MAKRPPDIIILGPKSKVRRRLNFDSPYGARAVVPIARVTKAKAWT
FT                   NRPINRKPRMYRMYRSPDVPRGCEGPCKVQSFESRHDVSHIGKVMCVSDVTRGTGLTHR
FT                   IGKRFCVKSVYVLGKIWMDEKNFNKNHTNSVIFFLVRDRRPTGSPQNFGGVFNMFDNEP
FT                   GPATVKNMHRDRFQVLRKWHATLTGGKYASRGQALVRKFVRVNNFFVYNQQEAGKYENH
FT                   TENAFLLYMACTHASNPVYATLKIPIFFFDCVTN"
XX
SQ   Sequence 771 BP; 187 A; 178 C; 219 G; 187 T; 0 other;

hm101172 Length: 771  19-MAY-2010  Type: N  Check: 8695  ..

       1  atggcgaaac gtccgccgga tattattatt ctgggcccga aaagcaaagt
      51  gcgtcgtcgt ctgaactttg atagcccgta tggcgcgcgt gcggtggtgc
     101  cgattgcgcg tgtgaccaaa gcgaaagcgt ggaccaaccg tccgattaac
     151  cgtaaaccgc gtatgtatcg tatgtatcgt agcccggatg tgccgcgtgg
     201  ctgcgaaggc ccgtgcaaag tgcagagctt tgaaagccgt catgatgtga
     251  gccatattgg caaagtgatg tgcgtgagcg atgtgacccg tggcaccggc
     301  ctgacccatc gtattggcaa acgtttttgc gtgaaaagcg tgtatgtgct
     351  gggcaaaatt tggatggatg aaaaaaactt taacaaaaac cataccaaca
     401  gcgtgatttt ttttctggtg cgtgatcgtc gtccgaccgg cagcccgcag
     451  aactttggcg gcgtgtttaa catgtttgat aacgaaccgg gcccggcgac
     501  cgtgaaaaac atgcatcgtg atcgttttca ggtgctgcgt aaatggcatg
     551  cgaccctgac cggcggcaaa tatgcgagcc gtggccaggc gctggtgcgt
     601  aaatttgtgc gtgtgaacaa cttttttgtg tataaccagc aggaagcggg
     651  caaatatgaa aaccataccg aaaacgcgtt tctgctgtat atggcgtgca
     701  cccatgcgag caacccggtg tatgcgaccc tgaaaattcc gatttttttt
     751  tttgattgcg tgaccaacta a