Sequence of DPV Chilli leaf curl virus

Chilli leaf curl virus-Panipat 2 [India:Panipat:Papaya:2008] coat protein gene, complete cds.

ACC No: HM134224

Dated: 2012-07-04 | Length: 771 | CRC: 56777017

                
ID   HM134224; SV 1; linear; genomic DNA; STD; VRL; 771 BP.
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AC   HM134224;
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DT   31-OCT-2010 (Rel. 106, Created)
DT   04-JUL-2012 (Rel. 113, Last updated, Version 4)
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DE   Chilli leaf curl virus-Panipat 2 [India:Panipat:Papaya:2008] coat protein
DE   gene, complete cds.
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KW   .
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OS   Chilli leaf curl virus-Panipat 2 [India:Panipat:Papaya:2008]
OC   Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
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RN   [1]
RP   1-771
RX   PUBMED; 22437254.
RA   Singh-Pant P., Pant P., Mukherjee S.K., Mazumdar-Leighton S.;
RT   "Spatial and temporal diversity of begomoviral complexes in papayas with
RT   leaf curl disease";
RL   Arch. Virol. 157(7):1217-1232(2012).
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RN   [2]
RP   1-771
RA   Singh P., Mukherjee S.K., Mazumdar-Leighton S.;
RT   ;
RL   Submitted (19-APR-2010) to the INSDC.
RL   Department of Botany, University of Delhi, Lab #15, Ground Floor, North
RL   Campus, Chattra Marg., New Delhi 110007, India
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FH   Key             Location/Qualifiers
FH
FT   source          1. .771
FT                   /organism="Chilli leaf curl virus-Panipat 2
FT                   [India:Panipat:Papaya:2008]"
FT                   /host="Carica papaya; cultivar Taiwan"
FT                   /isolate="Panipat-2"
FT                   /mol_type="genomic DNA"
FT                   /country="India:Haryana"
FT                   /isolation_source="leaf"
FT                   /collection_date="Apr-2008"
FT                   /db_xref="taxon:1036261"
FT   CDS             1. .771
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /note="involved in encapsidation"
FT                   /db_xref="GOA:E3U9G5"
FT                   /db_xref="InterPro:IPR000263"
FT                   /db_xref="InterPro:IPR000650"
FT                   /db_xref="UniProtKB/TrEMBL:E3U9G5"
FT                   /protein_id="ADO95313.1"
FT                   /translation="MSKRPADIIISTPASKVRRLLNFDSPYTSRAAAPIVRVTKAKAWA
FT                   NRPMNRKPRMYRMYRSPDVPRGCEGPCKVQSFESRHDIQHIGKVMCVSDATRGTGLTHR
FT                   VGKRFCVKSVYVLGKIWMDENIKTKNHTNSVMFFLVRDRRPVDKPQDFGEVFNMFDNEP
FT                   STATVKNMHRDRYQVLRKWHATVTGGQYASKEQALVKKFVRVNNYVVYNQQEAGKYENH
FT                   TENALMLYMACTHASNPVYATLKIRIYFYDSVSN"
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SQ   Sequence 771 BP; 215 A; 158 C; 196 G; 202 T; 0 other;

hm134224 Length: 771  04-JUL-2012  Type: N  Check: 8425  ..

       1  atgtcgaagc gaccagcaga tataatcatt tccacgcccg cctcgaaggt
      51  acgccgcctt ctcaacttcg acagcccata taccagccgc gctgctgccc
     101  ccattgtccg cgtcaccaaa gcaaaagcat gggccaacag gcccatgaac
     151  aggaagccca ggatgtacag gatgtacaga agcccagatg ttccgagggg
     201  ctgtgaaggc ccgtgtaagg tccagtcgtt tgagtccagg catgatatcc
     251  agcacattgg taaagtcatg tgtgttagtg atgctactcg tggtactggt
     301  ctgacccaca gagtaggtaa gcgtttctgt gttaagtctg tgtatgtatt
     351  agggaagata tggatggatg agaatataaa gactaagaat cacacgaata
     401  gtgtgatgtt tttccttgtc cgtgatcgtc gtcctgttga taaaccacaa
     451  gattttggag aggtgttcaa catgtttgac aacgagccta gcactgccac
     501  tgtgaagaat atgcatagag atcgttatca ggttttgagg aaatggcacg
     551  caacggttac tggtggacag tacgcgtcga aggaacaggc attagttaag
     601  aagttcgtta gggttaataa ttatgttgtg tataaccagc aggaagctgg
     651  taaatatgag aatcatactg agaatgcatt gatgttgtac atggcgtgta
     701  ctcacgcctc taatcctgtg tatgctacct taaagatacg gatctatttc
     751  tatgattcag tatcgaatta a