Sequence of DPV Chilli leaf curl virus

Chilli leaf curl virus-Noida [India:Uttar Pradesh:Papaya:2009] coat protein gene, complete cds.

ACC No: HM134232

Dated: 2012-07-04 | Length: 771 | CRC: -383550742

                
ID   HM134232; SV 1; linear; genomic DNA; STD; VRL; 771 BP.
XX
AC   HM134232;
XX
DT   31-OCT-2010 (Rel. 106, Created)
DT   04-JUL-2012 (Rel. 113, Last updated, Version 4)
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DE   Chilli leaf curl virus-Noida [India:Uttar Pradesh:Papaya:2009] coat protein
DE   gene, complete cds.
XX
KW   .
XX
OS   Chilli leaf curl virus-Noida [India:Uttar Pradesh:Papaya:2009]
OC   Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
XX
RN   [1]
RP   1-771
RX   PUBMED; 22437254.
RA   Singh-Pant P., Pant P., Mukherjee S.K., Mazumdar-Leighton S.;
RT   "Spatial and temporal diversity of begomoviral complexes in papayas with
RT   leaf curl disease";
RL   Arch. Virol. 157(7):1217-1232(2012).
XX
RN   [2]
RP   1-771
RA   Singh P., Mukherjee S.K., Mazumdar-Leighton S.;
RT   ;
RL   Submitted (19-APR-2010) to the INSDC.
RL   Department of Botany, University of Delhi, Lab #15, Ground Floor, North
RL   Campus, Chattra Marg., New Delhi 110007, India
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FH   Key             Location/Qualifiers
FH
FT   source          1. .771
FT                   /organism="Chilli leaf curl virus-Noida [India:Uttar
FT                   Pradesh:Papaya:2009]"
FT                   /host="Carica papaya"
FT                   /isolate="Noida"
FT                   /mol_type="genomic DNA"
FT                   /country="India:Uttar Pradesh"
FT                   /isolation_source="leaf"
FT                   /collection_date="Sep-2009"
FT                   /db_xref="taxon:913599"
FT   CDS             1. .771
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /note="involved in encapsidation"
FT                   /db_xref="GOA:E3U9H3"
FT                   /db_xref="InterPro:IPR000263"
FT                   /db_xref="InterPro:IPR000650"
FT                   /db_xref="UniProtKB/TrEMBL:E3U9H3"
FT                   /protein_id="ADO95321.1"
FT                   /translation="MSKRPADIIISTPASKVRRRLNFDSPYVNRAAAPIVRVTKAKAWA
FT                   NRPMNRKPRMYRIYRSPDVPRGCEGPCKVQSFESRHDVVHIGKVMCISDVTRGTGLTHK
FT                   VGKRFCVKSVYVLGKIWMDENIKTKNHTNSVMFFLVRDRRPVDKPQDFGEVFNMFDNEP
FT                   STATVKNMHRDRYQVLRKWHATVTGGQYASKEQALVKKFVRVNNYVVYNQQEAGKYENH
FT                   TENALMLYMACTHASNPVYATLKIRIYFYDSVTN"
XX
SQ   Sequence 771 BP; 221 A; 150 C; 199 G; 201 T; 0 other;

hm134232 Length: 771  04-JUL-2012  Type: N  Check: 9748  ..

       1  atgtcgaagc gaccagcaga tataatcatt tccacgcccg cctcgaaggt
      51  acgccgtcgt ctcaacttcg acagcccata tgtgaaccgt gctgctgccc
     101  ccattgtccg cgtcaccaaa gcaaaagcat gggcgaacag gcccatgaac
     151  agaaagccca ggatgtacag gatttacaga agcccagatg tccctagggg
     201  ctgtgaaggc ccatgtaagg tccagtcgtt tgagtccaga cacgatgtag
     251  ttcatatagg gaaggttatg tgtattagtg atgttacccg tggtactgga
     301  ttaacccata aagtaggtaa gcgtttctgt gttaagtctg tgtacgtatt
     351  agggaagata tggatggatg agaatataaa gactaagaat cacacgaata
     401  gtgtgatgtt tttccttgtt agggatcgta ggcccgttga taagccccaa
     451  gattttggag aggtgttcaa catgtttgac aacgagccta gcactgccac
     501  tgtgaagaat atgcatagag atcgttatca ggttttgagg aaatggcacg
     551  caacggttac tggtggacag tacgcgtcga aggaacaggc attagttaag
     601  aagttcgtta gggttaataa ttatgttgtg tataaccagc aggaagctgg
     651  taaatatgag aatcatacgg agaatgcatt gatgttgtac atggcgtgta
     701  ctcacgcctc taaccctgtg tatgctacat tgaagatacg gatctacttt
     751  tatgattccg taacgaatta a