Sequence of DPV Chilli leaf curl virus

Chilli leaf curl virus-DU [India:New Delhi:Papaya:2009] coat protein gene, complete cds.

ACC No: HM134233

Dated: 2012-07-04 | Length: 771 | CRC: 342750333

                
ID   HM134233; SV 1; linear; genomic DNA; STD; VRL; 771 BP.
XX
AC   HM134233;
XX
DT   31-OCT-2010 (Rel. 106, Created)
DT   04-JUL-2012 (Rel. 113, Last updated, Version 4)
XX
DE   Chilli leaf curl virus-DU [India:New Delhi:Papaya:2009] coat protein gene,
DE   complete cds.
XX
KW   .
XX
OS   Chilli leaf curl virus-DU [India:New Delhi:Papaya:2009]
OC   Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
XX
RN   [1]
RP   1-771
RX   PUBMED; 22437254.
RA   Singh-Pant P., Pant P., Mukherjee S.K., Mazumdar-Leighton S.;
RT   "Spatial and temporal diversity of begomoviral complexes in papayas with
RT   leaf curl disease";
RL   Arch. Virol. 157(7):1217-1232(2012).
XX
RN   [2]
RP   1-771
RA   Singh P., Mukherjee S.K., Mazumdar-Leighton S.;
RT   ;
RL   Submitted (19-APR-2010) to the INSDC.
RL   Department of Botany, University of Delhi, Lab #15, Ground Floor, North
RL   Campus, Chattra Marg., New Delhi 110007, India
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .771
FT                   /organism="Chilli leaf curl virus-DU [India:New
FT                   Delhi:Papaya:2009]"
FT                   /host="Carica papaya, cultivar Honey Dew"
FT                   /isolate="Department"
FT                   /mol_type="genomic DNA"
FT                   /country="India:New Delhi"
FT                   /isolation_source="leaf"
FT                   /collection_date="Sep-2009"
FT                   /db_xref="taxon:913595"
FT   CDS             1. .771
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /note="involved in encapsidation"
FT                   /db_xref="GOA:E3U9H4"
FT                   /db_xref="InterPro:IPR000263"
FT                   /db_xref="InterPro:IPR000650"
FT                   /db_xref="UniProtKB/TrEMBL:E3U9H4"
FT                   /protein_id="ADO95322.1"
FT                   /translation="MSKRPADIIISTPASKVRRRLNFDSPYASRAAAPTVRVTKARAWV
FT                   NRPMNRKPRMYRMYRSPDVPRGREGPCKVQSFESRHDVVHIGKVMCISDVTRGTGLTHR
FT                   VGKRFCVKSVYVLGKIWMDENIKTKNHTNSVMFFLVRDRRPVDKPQDFGEVFNMFDNEP
FT                   STATVKNMHRDRYQVLRKWHATVTGGQYASKEQALVKKFVRVNNYVVYNQQEAGKYENH
FT                   TENALMLYMACTHASNPVYATLKIRIYFYDSVSN"
XX
SQ   Sequence 771 BP; 212 A; 155 C; 198 G; 206 T; 0 other;

hm134233 Length: 771  04-JUL-2012  Type: N  Check: 521  ..

       1  atgtcgaagc gaccagcaga tataatcatt tccacgcccg cctcgaaggt
      51  acgccgccgt ctcaacttcg acagccctta tgccagccgt gctgctgccc
     101  ccactgtccg cgtcacaaag gccagagcat gggtgaacag gcccatgaac
     151  aggaagccca ggatgtacag gatgtacaga agcccagatg ttcctagggg
     201  tcgtgaaggc ccatgtaagg tccagtcttt tgagtctaga cacgatgtag
     251  ttcatatagg gaaggttatg tgtattagtg atgttacccg tggtactggg
     301  ttaacccata gagtaggtaa gcgtttctgt gttaagtctg tgtatgtatt
     351  agggaagata tggatggatg agaatatcaa gactaagaat cacacgaata
     401  gtgtgatgtt tttccttgtc cgtgatcgtc gtcctgttga taaaccacaa
     451  gattttggag aggtgttcaa catgtttgac aacgagccta gcactgccac
     501  tgtgaagaat atgcatagag atcgttatca ggttttgagg aagtggcacg
     551  caacggttac cggtggacag tacgcgtcga aggaacaggc attagttaag
     601  aagttcgtta gggttaataa ttatgttgtg tataaccagc aagaagctgg
     651  taaatatgag aatcacactg agaatgcatt gatgttgtac atggcgtgta
     701  ctcacgcctc taatcccgtg tatgctacct taaagatacg gatctatttc
     751  tatgattccg tttcaaatta a