Sequence of DPV Citrus tristeza virus

Citrus tristeza virus isolate Frankfield33 coat protein gene, complete cds.

ACC No: HM160507

Dated: 2012-05-28 | Length: 672 | CRC: 357472623

                
ID   HM160507; SV 1; linear; genomic RNA; STD; VRL; 672 BP.
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AC   HM160507;
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DT   28-MAY-2012 (Rel. 112, Created)
DT   28-MAY-2012 (Rel. 112, Last updated, Version 1)
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DE   Citrus tristeza virus isolate Frankfield33 coat protein gene, complete cds.
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KW   .
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OS   Citrus tristeza virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae;
OC   Closterovirus.
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RN   [1]
RP   1-672
RA   Fisher L.C., Tennant P.F., McLaughlin W.A.;
RT   "Molecular characterization of the coat protein gene of some biological
RT   Jamaican Citrus tristeza virus isolates";
RL   Unpublished.
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RN   [2]
RP   1-672
RA   Fisher L.C., Tennant P.F., McLaughlin W.A.;
RT   ;
RL   Submitted (28-APR-2010) to the INSDC.
RL   Life Sciences, University of the West Indies, Mona Campus, 2 St. John's
RL   Close, Kingston 7 0, Jamaica
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FH   Key             Location/Qualifiers
FH
FT   source          1. .672
FT                   /organism="Citrus tristeza virus"
FT                   /host="Citrus sp."
FT                   /strain="severe"
FT                   /isolate="Frankfield33"
FT                   /mol_type="genomic RNA"
FT                   /country="Jamaica"
FT                   /collection_date="Mar-2007"
FT                   /db_xref="taxon:12162"
FT   CDS             1. .672
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /protein_id="AEG77340.1"
FT                   /translation="MDDETKKLKNKNKETKEDDNVVAAESSFGSVNLHIDPTLIAMNDV
FT                   RQLGTQQNAALNRDLFLTLKGKYPNLPDKDKDFHLAMMLYRLAVKSSSLQSDDDTTGVT
FT                   YTRDGVEVELSDKLWTDVVFNSKGIGNRTNALRVWGRTNDALYLVFCRQNRNLSYGGRP
FT                   LDAGIPTGYHYLCADFLTGAGLTDLECAVYIQAKEQLLKKRGADEVVVTNVRQLGKFNT
FT                   R"
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SQ   Sequence 672 BP; 199 A; 120 C; 167 G; 186 T; 0 other;

hm160507 Length: 672  28-MAY-2012  Type: N  Check: 5273  ..

       1  atggacgacg aaacaaagaa attgaagaac aagaacaagg aaacgaaaga
      51  agacgacaat gttgttgcgg ctgagtcttc tttcggttcc gtaaacttac
     101  acatcgatcc gactttgata gcgatgaacg atgtacgtca gttgggtacc
     151  caacagaatg ctgctttgaa tagagatttg tttcttacct tgaaagggaa
     201  gtatcctaac ttacctgaca aagataaaga ttttcactta gctatgatgt
     251  tgtatcgttt agcagttaag agttcatcat tacaaagcga cgatgatacc
     301  acgggtgtga cgtacactcg ggatggtgtt gaagtggaat tgtctgacaa
     351  actttggaca gacgtcgtgt ttaactctaa gggtattggt aaccgtacta
     401  acgcccttcg agtctggggt agaactaacg atgcccttta tttggttttt
     451  tgtagacaga accgcaactt gagttatggt ggacgtccgt tagatgcagg
     501  aattccaacc gggtatcact acctgtgtgc agatttcttg accggagccg
     551  gcttgactga tttagaatgt gcagtgtaca tacaagctaa agagcaatta
     601  ttaaagaagc gaggggctga tgaggttgta gttactaatg tcaggcagct
     651  tggcaaattt aacacacgtt ga