Sequence of DPV Cleome yellow mosaic virus
Cleome yellow mosaic virus isolate Pirinopolis coat protein (AV1) gene, partial cds; and replication enhancer protein (AC3) and transactivator protein (AC2) genes, complete cds.
ACC No: HM357463
Dated: 2010-07-27 | Length: 1129 | CRC: 1902284039
ID HM357463; SV 1; linear; genomic DNA; STD; VRL; 1129 BP.
XX
AC HM357463;
XX
DT 27-JUL-2010 (Rel. 105, Created)
DT 27-JUL-2010 (Rel. 105, Last updated, Version 1)
XX
DE Cleome yellow mosaic virus isolate Pirinopolis coat protein (AV1) gene,
DE partial cds; and replication enhancer protein (AC3) and transactivator
DE protein (AC2) genes, complete cds.
XX
KW .
XX
OS Cleome yellow mosaic virus
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus;
OC unclassified Begomovirus.
XX
RN [1]
RP 1-1129
RA Fonseca M.E.N., Boiteux L.S., Fernandes N.A.N., Costa A.F., Lima-Neto A.F.,
RA Dutra W.P.;
RT "Cleome yellow mosaic virus: A new begomovirus infecting Cleome sp. in
RT Goias State, Brazil";
RL Unpublished.
XX
RN [2]
RP 1-1129
RA Fonseca M.E.N., Boiteux L.S., Fernandes N.A.N., Costa A.F., Lima-Neto A.F.,
RA Dutra W.P.;
RT ;
RL Submitted (25-MAY-2010) to the EMBL/GenBank/DDBJ databases.
RL Laboratorio de Analise Genomica, Embrapa-Hortalicas, Km 09
RL Brasilia-Goiania, Brasilia, DF 70359-970, Brazil
XX
FH Key Location/Qualifiers
FH
FT source 1. .1129
FT /organism="Cleome yellow mosaic virus"
FT /segment="DNA-A"
FT /host="Cleome sp."
FT /isolate="Pirinopolis"
FT /mol_type="genomic DNA"
FT /country="Brazil"
FT /collection_date="May-2008"
FT /db_xref="taxon:858518"
FT gene <1. .523
FT /gene="AV1"
FT CDS <1. .523
FT /codon_start=2
FT /gene="AV1"
FT /product="coat protein"
FT /note="CP"
FT /protein_id="ADK55021.1"
FT /translation="ISSRQVMCVSDITRGNGITHRVGKRFCVKSMYILGKVWMDENIKL
FT KNHTNTVMLWLVRDRRPYGTPMDFGQVFNLFDNEPSTATVKNDLRDRFQVLNRFHVKVT
FT GGQYASNEQALVRRFWRVNTHVTYNHQEAAKYENHTENALLLYMACTHASNPVYATLKI
FT RIYFYDSILN"
FT gene complement(520. .918)
FT /gene="AC3"
FT CDS complement(520. .918)
FT /codon_start=1
FT /gene="AC3"
FT /product="replication enhancer protein"
FT /note="Ren"
FT /protein_id="ADK55023.1"
FT /translation="MDSRTGELITAPQAENGVYTWEITNPLYFKIYDAVEILSRTTRVY
FT HVQIRFNHNLRKALDLHKAFLNFQVWTVSVTASGQTYLNRFKHLVLMYLNNVGVISLNN
FT VIRAVTFATDRPYVRRVRENHSIQFKLY"
FT gene complement(665. .1054)
FT /gene="AC2"
FT CDS complement(665. .1054)
FT /codon_start=1
FT /gene="AC2"
FT /product="transactivator protein"
FT /note="Trap"
FT /protein_id="ADK55022.1"
FT /translation="MRGSSSSNLPSIKVQHRAAKRRAIRRRRIDLNCGCTIYIHLNCAN
FT NGFTHRGTHHCASSGEWRVYMGDNKSPVFQDIRRGGDPVQNDAGIPRPDPVQPQPEESV
FT GSPQGVPQLPSLDSIGDSFWSDLFK"
XX
SQ Sequence 1129 BP; 273 A; 252 C; 301 G; 303 T; 0 other;
hm357463 Length: 1129 27-JUL-2010 Type: N Check: 7308 ..
1 tatctcatct cggcaggtga tgtgcgtgtc tgacattacc cgcggtaatg
51 gtattactca ccgcgttggt aagcgatttt gcgtcaagtc tatgtacatc
101 ctaggcaagg tgtggatgga cgagaacatc aagttgaaga accacacgaa
151 cacggtgatg ttgtggttag ttagggacag gagaccttac gggacgccca
201 tggatttcgg acaggttttt aacctgtttg ataacgagcc aagcaccgct
251 acggtgaaga acgatcttcg tgatcgtttt caggtgctga acaggttcca
301 tgtgaaggtc actggtggac agtacgcgag caacgagcag gcgctggtta
351 ggcgcttttg gagggtgaac acccacgtga cgtataacca ccaggaggcg
401 gcgaagtacg agaaccatac ggagaacgcc ctgttattgt atatggcatg
451 tactcatgcc tctaaccctg tatacgcgac gctcaagatt cgaatctatt
501 tctacgattc gatattgaat taataaagtt tgaattgtat tgaatggttc
551 tcgcgtacac gtcttacata cggtctgtcc gttgcgaagg tgacagctcg
601 gattacattg ttaaggctaa taacgcccac gttatttaga tacatgagga
651 ccaaatgttt aaacctattt aaataggtct gaccagaagc tgtcaccgat
701 actgtccaga cttggaagtt gaggaacgcc ttgtggagat ccaacgcttt
751 cctcaggttg tggttgaacc ggatctggac gtggtatacc cgcgtcgttc
801 tggacaggat ctccaccgcg tcgtatatct tgaaatacag gggatttgtt
851 atctcccatg tatacacgcc attctccgct tgaggcgcag tgatgagttc
901 ccctgtgcgt gaatccattg ttcgcgcagt ttaggtggat gtatattgtg
951 catccacagt taaggtcgat acgtctacgg cgaatggctc tccgtttcgc
1001 cgctctgtgc tgcactttga tagaggggag attcgaggaa gacgaaccgc
1051 gcattgtgaa gggtccacga tcggagtgca gcattctctt ctttctcgag
1101 gaagtctaat agctggaccg tacgcactc