Sequence of DPV Watermelon chlorotic stunt virus
Watermelon chlorotic stunt virus isolate LB1 segment DNA-B, complete sequence.
ACC No: HM368372
Dated: 2012-10-28 | Length: 2759 | CRC: 1410577765
ID HM368372; SV 1; circular; genomic DNA; STD; VRL; 2759 BP.
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AC HM368372;
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DT 04-JUL-2010 (Rel. 105, Created)
DT 28-OCT-2012 (Rel. 114, Last updated, Version 2)
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DE Watermelon chlorotic stunt virus isolate LB1 segment DNA-B, complete
DE sequence.
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KW .
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OS Watermelon chlorotic stunt virus
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
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RN [1]
RP 1-2759
RA Samsatly J., Sobh H., Jawjari M., Najjar C., Haidar A., Abou-Jawdah Y.;
RT "First Report of Watermelon chlorotic stunt virus in Cucurbits in Lebanon";
RL Plant Dis. 96(11):1703-1703(2012).
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RN [2]
RP 1-2759
RA Samsatly J., Abou-Jawdah Y., Sobh H.;
RT ;
RL Submitted (30-MAY-2010) to the INSDC.
RL Plant Protection, AUB, American University of Beirut-Bliss street - Hamra,
RL Beirut 7546, Lebanon
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FH Key Location/Qualifiers
FH
FT source 1. .2759
FT /organism="Watermelon chlorotic stunt virus"
FT /segment="DNA-B"
FT /host="Cucumis melo (melon)"
FT /isolate="LB1"
FT /mol_type="genomic DNA"
FT /country="Lebanon"
FT /collection_date="Nov-2009"
FT /db_xref="taxon:35341"
FT gene 522. .1286
FT /gene="BV1"
FT CDS 522. .1286
FT /codon_start=1
FT /gene="BV1"
FT /product="nuclear shuttle protein"
FT /protein_id="ADJ38377.1"
FT /translation="MPVIRRYDGTPHGTRGRKRKQFFRPFKSGLFRRRQASRRLFAEKP
FT REKLSRRCLEDVHSGPSYALMNQCDVTSYVTYPILGLEGNGGRRSDFIKLMNVRVSGTI
FT NVTPLPAEPMSDRSPMNGIFVLLLIVDRKPFVPEGVNVLPSFKELFGEYECVYGIPRVK
FT ENQRHRYRILGMWKQYVSGDDSAVQKDFTLRRNISGPRYNVWAAFKDIDQMSTGGNYKN
FT VSKNAILACNVWVSTVRSKCEVYSQFVLDYVG"
FT gene complement(1326. .2321)
FT /gene="BC1"
FT CDS complement(1326. .2321)
FT /codon_start=1
FT /gene="BC1"
FT /product="BC1 protein"
FT /protein_id="ADJ38378.1"
FT /translation="MIIYCVQSYLHLRIELRRKVPVENGMEGAYTVTNKYIHTKRTEYT
FT LTTDATPITLQFPSSIEQTRVRLLGRCMKIDHIIIEYRNQVPFNATGSVIIEIRDNRIS
FT DEEAAQAAFTFPIACNVDLHYFSSSFFSVAEQCPWEIVYRVEDSNVLNGVRFASFKAKL
FT RLSSARHSTDIMFKAPTIKILTKGYKEDCIDFWSVERGETRRRLLNPTPSAQSNRALSK
FT RPITILPGETWATKSHVGLPSASDSQSRDTYRSQSMRLDHTRSFTGTSYESDDTPYAGL
FT HRLQTATLDPGDSVSQTRSETFSRQDLESILENTINKCLIKNKNDNNQML"
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SQ Sequence 2759 BP; 698 A; 605 C; 683 G; 773 T; 0 other;
hm368372 Length: 2759 28-OCT-2012 Type: N Check: 7062 ..
1 accgggtggc cgccggatcc catttgtgcg gaccccacac agtctccaaa
51 tggcattttg gtaatttccg tttactaaga tggttttttt gtaatttacg
101 tttaattaaa aagagggacc accgcactat cactctcttg gccaatcaaa
151 ttgcaccctg attcttaagg ggataaattt gggcctcggc ccaatttatc
201 gatgtgacgg gacgtacgtc tgctttatga gattggcccg caacgactgc
251 tttgtctgac aggaccacat gtgacactga cagttctgtt ctttaacctt
301 aagaaaattc aaggaatttt cccgcctatt tcgcctcgag gagcaaacag
351 tcgttggatg cccgccacct gtcacttgtt cgttcgttcg atttccgttt
401 ttcgattaat ttgtggtctc tgtacatgtt ggcctgttat ttatgacagt
451 gtggcgccca tactgaggtg tccaactggg actgtattcg tattgagagg
501 atatacgtat cctcccaagc tatgccagtg attcgtcgct atgatgggac
551 acctcatggt acgcgtggac gaaagcggaa gcagttcttt cgcccgttca
601 agtctggtct gtttagacgc cgtcaggcgt cgaggcgtct gtttgccgaa
651 aagccacgcg agaaactctc acgccgttgc ctggaggatg ttcacagtgg
701 gccgtcttat gcactgatga atcagtgcga cgtgacatct tatgtgacgt
751 atcctattct cggtctagag ggcaacgggg gacgtagaag tgactttatt
801 aagctgatga acgtgcgcgt ttctggcacg atcaacgtga cccctttgcc
851 tgcagagccc atgtctgatc gttctcctat gaacggtata tttgttctac
901 ttttgattgt ggacaggaaa ccattcgtac ccgaaggtgt gaacgtattg
951 cccagtttca aggaactgtt cggcgagtat gaatgcgtct acggcattcc
1001 acgagtgaag gaaaatcagc gtcataggta caggattctg ggcatgtgga
1051 aacaatacgt cagcggtgac gatagtgcgg tgcagaagga ctttactttg
1101 cgaaggaaca tcagtggccc gagatacaac gtatgggcag cattcaaaga
1151 cattgatcaa atgtccacag gaggaaatta caagaacgtg agcaagaatg
1201 ccattcttgc ctgtaatgta tgggtctcta cagttcgttc gaaatgtgaa
1251 gtgtattcgc aatttgtact ggattatgtg ggctgaaata aaattcaatt
1301 ttatttatgc gttcaacaat cgttattaca gcatttgatt attatcgttt
1351 ttgttcttaa ttaggcactt attaatcgta ttttctaaaa tagattctag
1401 gtcctgcctc gagaaagtct ctgatcttgt ctgggagact gagtctcccg
1451 ggtctagcgt ggctgtttgt agtctgtgca gccctgcata tggcgtgtcg
1501 tcggactcat atgaggtccc cgtgaaactg cgtgtgtggt ccagtctcat
1551 cgactgggat ctgtacgtgt cgcgactttg agagtccgac gcagaaggca
1601 acccaacatg cgactttgtg gcccaagttt ctccaggtaa tatcgtaatt
1651 ggcctctttg acagggcccg attcgattgg gccgacgggg ttgggttgag
1701 cagccttcgt cgtgtttcgc ctcgttcaac ggaccagaag tctatgcagt
1751 cctccttgta accctttgtc aggatcttga tcgtcggagc cttgaacatg
1801 atgtccgttg aatgtcgtgc agaactcagt cgcaacttgg ctttgaaaga
1851 agcaaaccgg acaccgttca agacgttcga gtcctcgacc ctgtacacga
1901 tctcccaggg acactgctcg gcgactgaaa aaaacgacga agagaagtag
1951 tgaagatcta cgttgcaagc tatcgggaag gtgaaggcag cctgtgctgc
2001 ttcctcgtcg gagatacggt tgtcccgtat ctcaataatc acagatcccg
2051 ttgcgttaaa cgggacctgg tttctgtact caatgataat gtggtcgatc
2101 ttcatgcatc ttcccaacag acgcactctt gtctgctcga tcgaactggg
2151 aaactgaagg gttataggag tggcgtctgt agtgagcgta tattccgtcc
2201 tcttggtatg tatgtacttg ttagtgacgg tatacgcgcc ctccattccg
2251 ttctccacag gaacctttcg acgaagttca attctgaggt gcagatagct
2301 ctgcacacaa taaattatca ttaacacagg caaagcaaca agagaacgga
2351 gattattcta ttatataaaa taaggccccg caggggaaat actcaaaaca
2401 caccgagaaa ggacgtaatg ggcatactat ggcctaaagg atttttaagc
2451 gaaattaatt gagctgataa tcgtattggg tgttttggag tatttcataa
2501 actctaattc gttcgggcgt attaggaact ggtgttcgtc gtggagagaa
2551 ctcgaactga attcccaaat agaaaaaccc taatgaccga acaaatagat
2601 tggggagata aaataaggag aaaaaagctc tttcatgtac ggaactggag
2651 acacctccca gcccttctat ccctgtgaat tggagactgg agacaatata
2701 tagaagtagt atgatatatt actaggattt tgacacgtat gcggccatcc
2751 tataatatt