Sequence of DPV Squash leaf curl virus
Squash leaf curl virus isolate LB2 segment DNA-B, complete sequence.
ACC No: HM368374
Dated: 2012-07-27 | Length: 2607 | CRC: 1664773786
ID HM368374; SV 1; circular; genomic DNA; STD; VRL; 2607 BP.
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AC HM368374;
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DT 04-JUL-2010 (Rel. 105, Created)
DT 27-JUL-2012 (Rel. 113, Last updated, Version 2)
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DE Squash leaf curl virus isolate LB2 segment DNA-B, complete sequence.
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KW .
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OS Squash leaf curl virus
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
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RN [1]
RP 1-2607
RA Sobh H., Samsatly J., Jawhari M., Najjar C., Haidar A., Abou-Jawdah Y.;
RT "First report of squash leaf curl virus in cucurbits in Lebanon";
RL Plant Dis. 96(8):1231-1231(2012).
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RN [2]
RP 1-2607
RA Abou-Jawdah Y., Samsatly J., Sobh H.;
RT ;
RL Submitted (30-MAY-2010) to the INSDC.
RL Plant Protection, AUB, American University of Beirut-Bliss street - Hamra,
RL Beirut 7546, Lebanon
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FH Key Location/Qualifiers
FH
FT source 1. .2607
FT /organism="Squash leaf curl virus"
FT /segment="DNA-B"
FT /host="Cucurbita pepo (zucchini)"
FT /isolate="LB2"
FT /mol_type="genomic DNA"
FT /country="Lebanon"
FT /collection_date="Nov-2009"
FT /db_xref="taxon:10829"
FT CDS 450. .1301
FT /codon_start=1
FT /product="BV1"
FT /db_xref="GOA:D9J2V4"
FT /db_xref="InterPro:IPR000263"
FT /db_xref="InterPro:IPR001530"
FT /db_xref="UniProtKB/TrEMBL:D9J2V4"
FT /protein_id="ADJ38384.1"
FT /translation="MRRIHILDNTCIIYTYIHCTVSLSSFLMYSTSNRRGRSQTQRGSH
FT VRRTGVKRSYGAASGYARRRPNVVLNTQVEPRMTTQRVQENQFGPEFVLSQNSALSTFV
FT TYPSYVKSVPNRTRTYIKLKRLRFKGTLKIERGQGDTIMDGPISNIEGVFSMVIVVDRK
FT PHVSQSGRLHTFDELFGARIHCHGNLSVVPALKDRYYIRHVTKRVVSLEKDTLLIDLHG
FT TTHLSNKRYNCWASFSDLERDSCNGVYGNITKNALLVYYCWLSDAQSKASTYVSFELDY
FT LG"
FT CDS complement(1474. .2355)
FT /codon_start=1
FT /product="BC1"
FT /db_xref="GOA:D9J2V5"
FT /db_xref="InterPro:IPR000211"
FT /db_xref="UniProtKB/TrEMBL:D9J2V5"
FT /protein_id="ADJ38385.1"
FT /translation="MGSQLVQPPTAFNYIESQRDEFQLSHDLTEIVLQFPSTASQITAR
FT LSRSCMKIDHCVIEYRQQVPINASGTVIVEIHDKRMTDNESLQASWTFPIRCNIDLHYF
FT SSSFFSLKDPIPWKLYYRVSDSNVHQMTHFAKFKGKLKLSSAKHSVDIPFRAPTVKILA
FT KQFSEKDIDFWHVGYGKWERRLVKSASSSRFGLRGPIEINPGESWATKSAIGPTNRNAD
FT LDIEEELLPYRELNRLGTNILDPGESASIVGIQRSQSNITMSMSQLNELVRSTVHECIK
FT TSCIPSTPKSLS"
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SQ Sequence 2607 BP; 690 A; 545 C; 576 G; 796 T; 0 other;
hm368374 Length: 2607 27-JUL-2012 Type: N Check: 483 ..
1 accggatggc cgcccgattt ttggtgtccg cctctttagc ccacggccca
51 ggcccatgtt aggcaaattg ggccgacgtt tgatccgttt aagccgcgcg
101 ccttcttcct ccagggacca cacagcactt tcgaccaatt acgttgttat
151 tgataaacct atttggtatg gatcgtacga catgtgtgga ccactgtcac
201 atggtgctgt gtcagacgct cgactttaat tcaaattggc aaagtgatta
251 tcttcgtctt taatttgtac tgtcacagag tgttggacca tctctgtgca
301 ctatcgacga tgtccttttg ttctatggac ctcgttctgt caatttgaat
351 taatctttag tgctaccaat tacagtttag ctacagagac tagttattgt
401 tcatggattg gttcttcgtc tattaatact tgaaacgtgt aattggctta
451 tgcgtcgaat tcatatatta gacaacacgt gtattattta cacgtatata
501 cattgtacag tatctctatc atcgttcttg atgtattcga cgagcaatag
551 acggggtcga tcgcaaactc agcgaggttc tcatgtacgc cgtacaggtg
601 tcaagcgttc atatggtgca gccagtggtt atgcaaggcg tcgacccaac
651 gtggtattaa atactcaagt tgaaccaaga atgactacac agcgtgttca
701 agagaaccag tttggcccag aatttgtctt gagtcaaaac tcagcgttgt
751 ccacgtttgt aacatatcct agctatgtta agtctgttcc caatcgcaca
801 agaacgtata taaaattgaa acgactgcgt tttaagggaa ctctgaaaat
851 tgaacgtgga caaggtgaca ctattatgga cgggcccatt tctaatattg
901 aaggagtatt ttctatggtc atcgtggttg atcggaaacc acatgttagt
951 caatctggcc gtctacatac atttgatgag ttgtttggcg cgcgtatcca
1001 ttgtcacggt aatttatctg tcgtacctgc tttgaaggac cgttactaca
1051 ttagacacgt tacgaagcgt gtggtgtctc ttgaaaagga cacattactg
1101 attgatctcc atggtacgac acatctgtct aacaagcgtt ataattgttg
1151 ggcatcgttc agtgatcttg aacgggattc atgtaatggc gtttacggta
1201 acataaccaa gaacgctctg ttagtgtatt actgttggct gtcggatgcc
1251 cagtccaagg catcaacata tgtatcgttt gaactggact atttgggatg
1301 attaagatta ataaattgca caagtcccgc aattaaataa gaactaaata
1351 ctgaacaggg ctgtttattc tactattaaa aatggccgcg cagcgcaaca
1401 ctctccaaaa catgatgagc gataacatta acaactaata tgagcgtaaa
1451 gcgaactaat aatttaattg gcattagctt agggattttg gagtgctcgg
1501 gatacaactg gttttaatgc actcatgtac agtggatcta actaattcgt
1551 tcaactgtga cattgacatg gtgatgttcg attgcgaccg ttgtattccg
1601 actattgaag ctgattcccc aggatctaag atgttagttc ccaacctgtt
1651 tagttccctg tatggaagca gctcttcttc aatatctaaa tccgcatttc
1701 tgttagttgg gcctattgca ctctttgtgg cccaagattc acctggatta
1751 atttcaattg ggcctcttag cccaaatcta gatgacgatg cggatttgac
1801 cagtcttctc tcccacttgc cgtatcccac gtgccagaaa tcaatgtcct
1851 tttcgctaaa ttgttttgca agtatcttta ctgtcggtgc ccggaaaggg
1901 atatcaacgg agtgcttcgc cgacgatagc ttcagtttgc ccttgaattt
1951 agcgaaatgc gtcatttgat gcacattcga gtctgagact cgatagtata
2001 acttccatgg gattgggtct tttagagaga agaacgatga tgaaaaatag
2051 tggagatcta tgttacatct tatcggaaaa gtccacgacg cttgcagcga
2101 ttcattgtcc gtcatgcgtt tgtcgtgaat ctccactatt accgtacccg
2151 atgcgttaat cggaacctgt tgccgatatt ctatgacgca gtggtcgatt
2201 ttcatacaac tacgactcag cctcgctgtt atctgagatg ccgtcgaggg
2251 aaattgcaga acaatttccg ttaggtcgtg cgatagctga aattcgtccc
2301 tctgcgattc tatataattg aatgcggttg ggggttggac taattgagaa
2351 cccattagct cttgtaatac tgaacaagca atttaaatcc ggaatcgcac
2401 tgtaaaatat gagttcagga tagatatatg cggaacgaag tgagttaggg
2451 tttgagtggc atattttgta aatatgcatc gggacaccag gaggtgtgct
2501 ctcaactttc tcatattgct ggtgtcctgg tgtcctatat atacctcaag
2551 acacataaag cctctagggg acaccaaggg gcaaaatcgg ccatccgcaa
2601 taatatt