Sequence of DPV Kenaf leaf curl virus
Kenaf leaf curl virus segment DNA-A, complete sequence.
ACC No: HM448898
Dated: 2010-06-29 | Length: 2751 | CRC: 1095522713
ID HM448898; SV 1; circular; genomic DNA; STD; VRL; 2751 BP.
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AC HM448898;
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DT 29-JUN-2010 (Rel. 105, Created)
DT 29-JUN-2010 (Rel. 105, Last updated, Version 1)
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DE Kenaf leaf curl virus segment DNA-A, complete sequence.
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KW .
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OS Kenaf leaf curl virus
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus;
OC unclassified Begomovirus.
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RN [1]
RP 1-2751
RA Ding M., Zhang Z.;
RT "First report of Kenaf leaf curl virus infecting tomato in China";
RL Unpublished.
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RN [2]
RP 1-2751
RA Ding M., Zhang Z.;
RT ;
RL Submitted (03-JUN-2010) to the EMBL/GenBank/DDBJ databases.
RL Yunnan Academy of Agricultural Sciences, Institute of Biotechnology and
RL Genetics, Xueyun Road 9, Kunming, Yunnan 650223, China
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FH Key Location/Qualifiers
FH
FT source 1. .2751
FT /organism="Kenaf leaf curl virus"
FT /segment="DNA-A"
FT /host="Lycopersicon esculentum"
FT /isolate="YN377"
FT /mol_type="genomic DNA"
FT /country="China:Yunnan Province"
FT /collected_by="Ming Ding"
FT /collection_date="16-Nov-2006"
FT /db_xref="taxon:449400"
FT gene 129. .476
FT /gene="AV2"
FT CDS 129. .476
FT /codon_start=1
FT /gene="AV2"
FT /product="AV2 protein"
FT /protein_id="ADJ19040.1"
FT /translation="MWDPLVNEFPDTVHGFRCMLAIKYLQLLSEGYSPDTVGYDLIREL
FT ISIVRSRNYVEASCRYRHFYPRVEGASPAELRQPLCNPCSCPHCPRHKISHVGEQAHEP
FT QAQNVQDVQKS"
FT gene 289. .1059
FT /gene="AV1"
FT CDS 289. .1059
FT /codon_start=1
FT /gene="AV1"
FT /product="coat protein"
FT /protein_id="ADJ19041.1"
FT /translation="MSKRPADIVISTPASKVRRRLNFDSPYATRAVVPTVRVTKSRMWA
FT NRPMNRKPRMYRMYRSPDVPRGCEGPCKVQSFESRHDVVHIGKVMCISDVTRGTGLTHR
FT VGKRFCVKSVYVLGKIWMDENIKSKNHTNNVMFFLVRDRRPTGTPQDFGDVFNMFDNEP
FT STATVKNVHRDRYQVLRKWYATVTGGQYGAKEQALVKKFVKVNNYVAYNQQEAGKYENH
FT SENALMLYMACTRASNPVYATLKIRIYFYDSVTN"
FT gene complement(1062. .1466)
FT /gene="AC3"
FT CDS complement(1062. .1466)
FT /codon_start=1
FT /gene="AC3"
FT /product="AC3 protein"
FT /protein_id="ADJ19042.1"
FT /translation="MHLRTGEPITAAQAWSGAYIWEVPNPLYFKILNHDNRPFTMNMDI
FT ITIRIQFNYNLRRALGVHKCFLTYRIWTTLHPRTGLFLRVFKTQVLKYLTNLGVISINA
FT IIRAVDHVLWKKLEQTMYVDMTSEIKLNIY"
FT gene complement(1159. .1611)
FT /gene="AC2"
FT CDS complement(1159. .1611)
FT /codon_start=1
FT /gene="AC2"
FT /product="AC2 protein"
FT /protein_id="ADJ19043.1"
FT /translation="MRSSSPSKDHCTQVPIKVQHREAKKRNRRRRVDLECGCSYYLSIN
FT CFNHAFTHRGTHHCSSSMEWRLYLGSSKSPLFQDPQPRQPSIHDEHGHHHNQDPIQLQP
FT SESSGSAQVFSNLPNLDDLTPSDWSFLKGIQNPSPQVSHKSGCNLN"
FT gene complement(1508. .2600)
FT /gene="AC1"
FT CDS complement(1508. .2599)
FT /codon_start=1
FT /gene="AC1"
FT /product="AC1 protein"
FT /protein_id="ADJ19044.1"
FT /translation="MATPNRFKINAKNYFLTYPKCSLTKEEALSQFLNLQTPTSKKFIR
FT ICRELHEDGTPHLHVLIQFEGKFQCRNNRFFDLTSPSRSAHFHPNIQGAKSSSDVKTYM
FT EKDGDILDHGIFQVDGRSARGGCQSANDAYAEAINAGSKSQALNILKEKAPRDFLLQFH
FT NLNSNLDRYFQEPTAPYVSPFSSSSFDQVPEELEEWAAENVVDAAARPLRPQSIVIEGD
FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYSVIDDVDPHFLKHFKEFMGAQRDW
FT QSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEFLDEEKNTALKNWALKNAIFVTLQGPL
FT YSGSNQSTAQGSEETQQEEESRS"
FT gene complement(2149. .2448)
FT /gene="AC4"
FT CDS complement(2149. .2448)
FT /codon_start=1
FT /gene="AC4"
FT /product="AC4 protein"
FT /protein_id="ADJ19045.1"
FT /translation="MKMGLLTCMFSSSSKASSSAGTIDSSTSHPQVGQHISIQTFRELK
FT AQAMSKPTWRKTETSLIMEFSKSMEDQLEEVASLPTTHMPRQSTQGPNLRPSIY"
XX
SQ Sequence 2751 BP; 688 A; 572 C; 670 G; 821 T; 0 other;
hm448898 Length: 2751 29-JUN-2010 Type: N Check: 3457 ..
1 accggatggc cgcgcgattt tttatgggcc cccccactaa ctgctgtctg
51 ccaatcacat gacgcgctca aagcttaaat aatttcccgc cgttataaat
101 acttcggctc taagtatccg cttgcaaaat gtgggatcca ctggtaaacg
151 agttccccga tacggttcac gggtttcggt gcatgttagc aatcaagtat
201 ctccagttac tctctgaagg ctactccccc gacacggttg gttacgatct
251 gatacgtgaa ttaatttcta ttgtgcgttc caggaattat gtcgaagcgt
301 cctgcagata tcgtcatttc tacccccgcg tcgaaggtgc gtcgccggct
351 gaacttcgac agcccctatg caacccgtgc agttgtcccc actgtccgcg
401 tcacaaaatc tcgcatgtgg gcgaacaggc ccatgaaccg caagcccaga
451 atgtacagga tgtacagaag tcctgatgtt ccacgaggct gtgagggtcc
501 atgtaaggtc caatcctttg agtctagaca cgatgtagtc catataggga
551 aggttatgtg tattagtgat gtcactcgcg gtactgggct gacccataga
601 gttgggaagc gtttttgtgt aaagtctgtc tatgtgttgg gtaagatatg
651 gatggatgaa aatatcaaga gcaagaatca cacgaacaat gtcatgtttt
701 tccttgtccg tgatcgacgt ccgaccggca cgcctcagga ttttggagat
751 gtctttaaca tgtttgacaa cgagccaagt acagcaactg tgaagaatgt
801 gcatcgagat cgttaccagg tcttgaggaa gtggtatgca actgtcactg
851 gtggacagta tggagcaaag gaacaggctt tggttaagaa gtttgttaag
901 gtcaataatt atgttgctta caatcagcaa gaggctggga agtacgagaa
951 ccattccgag aatgccttga tgttgtatat ggcatgtacc cgtgcctcta
1001 atcctgtgta cgctaccctt aagattagga tctacttcta cgattctgta
1051 accaactgat attaataaat atttaatttt atttctgaag tcatgtctac
1101 atacatagtt tgctctaatt ttttccataa tacatgatca actgccctaa
1151 taatagcatt aattgagatt acacccagat ttgtgagata cttgaggact
1201 tgggttttga atacccttaa gaaaagacca gtccgagggt gtaaggtcgt
1251 ccagattcgg taggttagaa aacacttgtg cactcccaga gctctccgaa
1301 ggttgtagtt gaattggatc ctgattgtga tgatgtccat gttcatcgtg
1351 aatggacggt tgtcgtggtt gaggatcttg aaatagaggg gatttggaac
1401 ttcccagata taggcgccac tccatgcttg agctgcagtg atgggttccc
1451 ctgtgcgtaa atgcatggtt gaagcagttg atagacagat aataagaaca
1501 cccgcattca agatcgactc tcctcctcct gttgcgtttc ttcgcttccc
1551 tgtgctgtac tttgattgga acctgagtac agtggtcctt ggagggtgac
1601 gaagatcgca ttcttgagag cccaattctt tagtgcggtg ttcttttcct
1651 cgtcgaggaa ttctttatag ctgctattgg gaccaggatt gcataggaag
1701 attgtcggta tcccgccttt aatttgaact ggcttcccgt attttgtgtt
1751 ggattgccag tccctttggg cccccatgaa ctctttaaag tgttttagga
1801 agtgcgggtc gacgtcatcg atgacgctgt accacgcgtc gttgctgtag
1851 actttgggac tcaggtctag atgtccacat aagtagttgt gtgggcctaa
1901 tgatctggcc cacattgtct tcccggtacg actatctccc tcaatgacta
1951 tactttgggg tctcaagggc cgcgcagcgg catcgacaac gttctcggcc
2001 gcccactctt caagttcttc gggaacttga tcgaaagaag aggatgaaaa
2051 aggagaaaca taaggagctg ttggctcctg aaaataccta tctaaatttg
2101 aatttaaatt atgaaattga agtagaaagt ctcttggggc tttctccttt
2151 aatatattga gggcctgaga tttggaccct gcgttgattg cctcggcata
2201 tgcgtcgttg gcagactggc aacctcctct agctgatctt ccatcgactt
2251 ggaaaattcc atgatcaagg atgtctccgt ctttctccat gtaggttttg
2301 acatcgcttg agcttttagc tccctgaatg tttggatgga aatgtgctga
2351 cctacttggg gatgtgaggt cgaagaatct attgttcctg cactggaact
2401 tgccttcgaa ctggatgaga acatgcaagt gaggagtccc atcttcatga
2451 agctctctgc agattctaat gaattttttg gaagttgggg tttggagatt
2501 taagaattgg gaaagtgcct cttctttagt gagggagcac ttgggataag
2551 tgaggaaata atttttggca tttattttaa accgattggg ggttgccatg
2601 ttgactaagt caatcggtgt ctctcaattt gttctatgta tcggtgtatt
2651 ggagtcctat atatatggag actctaatgg cataattgta ataaaataat
2701 tataatttga aattcaaacg aaaaggctaa agcggccatc cgtctaatat
2751 t