Sequence of DPV Sida micrantha mosaic virus
Sida micrantha mosaic virus [Brazil:Mato grosso do sul:2:2007] - [Bolivia] segment DNA-B, complete sequence.
ACC No: HM585434
Dated: 2011-03-04 | Length: 2644 | CRC: 1023847370
ID HM585434; SV 1; circular; genomic DNA; STD; VRL; 2644 BP.
XX
AC HM585434;
XX
DT 16-JAN-2011 (Rel. 107, Created)
DT 04-MAR-2011 (Rel. 108, Last updated, Version 2)
XX
DE Sida micrantha mosaic virus [Brazil:Mato grosso do sul:2:2007] - [Bolivia]
DE segment DNA-B, complete sequence.
XX
KW .
XX
OS Sida micrantha mosaic virus [Brazil:Mato grosso do sul:2:2007] - [Bolivia]
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus;
OC unclassified Begomovirus.
XX
RN [1]
RP 1-2644
RX PUBMED; 21170729.
RA Wyant P.S., Gotthardt D., Schafer B., Krenz B., Jeske H.;
RT "The genomes of four novel begomoviruses and a new Sida micrantha mosaic
RT virus strain from Bolivian weeds";
RL Arch. Virol. 156(2):347-352(2011).
XX
RN [2]
RP 1-2644
RA Wyant P.S.;
RT ;
RL Submitted (24-JUN-2010) to the EMBL/GenBank/DDBJ databases.
RL Molecular Biology and Plant Virology, University of Stuttgart,
RL Pfaffenwaldring 57, Stuttgart, Baden-Wurttenberg 70550, Germany
XX
FH Key Location/Qualifiers
FH
FT source 1. .2644
FT /organism="Sida micrantha mosaic virus [Brazil:Mato grosso
FT do sul:2:2007] - [Bolivia]"
FT /segment="DNA-B"
FT /host="Sidastrum micranthum"
FT /strain="SimMV-MGS2:07-Bo"
FT /mol_type="genomic DNA"
FT /country="Bolivia"
FT /lat_lon="21.02 S 63.38 W"
FT /collection_date="Nov-2007"
FT /db_xref="taxon:932065"
FT gene 535. .1305
FT /gene="BV1"
FT CDS 535. .1305
FT /codon_start=1
FT /gene="BV1"
FT /product="nuclear shuttle protein"
FT /db_xref="UniProtKB/TrEMBL:E7CSZ8"
FT /protein_id="ADV15526.1"
FT /translation="MFPIRYRRGWSSNQRRGYTRNPVFKRSYVAKRSDVKRRPSNPNRA
FT QEEGKLSVQRIHENQFGPEFVMGHNSAISTFITYPSLGKALPNRSRSYIKLRRLRFKGT
FT VKVERVPADVNMDGSIPKIEGVFSLVVVVDRKPHLGSSGALHTFDELFGARIHSHGNLA
FT IVPSLKDRFYIRHVFKRVLSVEKDTLMVDVEGTTTLSTRRFSCWSSFKDVDRESCNGVY
FT ANISKNALLVYYCWMSDNMSKASTFVTFDLDYVG"
FT gene complement(1386. .2267)
FT /gene="BC1"
FT CDS complement(1386. .2267)
FT /codon_start=1
FT /gene="BC1"
FT /product="movement protein"
FT /db_xref="UniProtKB/TrEMBL:E7CSZ9"
FT /protein_id="ADV15527.1"
FT /translation="MESQLVNPPNAFNYIESQRDEYQLSHDLTEILLQFPSTASQLSAR
FT LSRSCMKIDHCVIEYRQQVPINAVGSVVVEIHDKRMTDNESLQASWTFPIRCNIDLHYF
FT SSSFFSLKDPIPWKLYYRVCDTNVHQRTHFAKFKGKLKLSTAKHSVDIPFRAPTVKILS
FT KQFTEKDIDFSHVGYGKWERKMIRSASISGVGLPSPIEIRPGESWAVRSTIGISQSDAD
FT SDIENATHPYRQLHRLGTSCLDPGDSASIVGAQRAQSNITMSMAQLNELVRATAQECIN
FT SNCTPSQPKSLQ"
XX
SQ Sequence 2644 BP; 639 A; 572 C; 654 G; 779 T; 0 other;
hm585434 Length: 2644 04-MAR-2011 Type: N Check: 2778 ..
1 accggatggc cgcgcgattt ttcccccccc cacgtggcgc gctggtgccc
51 gttcgattcc cctctccctg gtggcccccg ctccctctct cccctggctc
101 aattcaattg agcgcttttt tggagtccgc gaaatgggtt aaccgcattt
151 tttgaagtcc gccgacgaat ggtcccttta atttgaatta aaggggttat
201 aatttttatt gtccaatcat ttcgctcggg ttgtctactc gcgcgacgct
251 cgcttttgat catctgtacg aattgtgttc tggatcgttg gataatatta
301 taatatattc agcttcttta atttgaaatt tgaattattg gcgagcgtcg
351 tgctaccatg tcccatcgta cgaatttgat gagctggacc agttaagttg
401 tagatatgga gtttatttga gcaaggaatt tatctttaaa ttccctggtg
451 acggatggtg atatcaggtt aagtgaccac gtctattgtc ttagcagtgt
501 ccactaactt ctgtatacga gtcatttcag aaacatgttt cccattaggt
551 atagacgtgg ttggtcgtct aatcaacgac gaggttacac acgtaatcct
601 gtgtttaagc gttcatatgt tgccaaacga agtgatgtca agcgacgacc
651 cagtaatcct aacagggccc aagaagaagg gaaactatca gtccaacgga
701 tacacgagaa ccagtttggg cctgaatttg ttatgggcca taattcagcc
751 atttctacgt tcatcactta cccttcgctt ggaaaggctc tcccgaaccg
801 atccaggtca tatattaagc taagacgact gcgttttaag ggtacagtca
851 aggtggagcg tgtacctgct gacgtcaaca tggacggttc tatcccaaag
901 attgagggag tcttctctct cgttgttgtt gtggatcgta aaccacatct
951 cggttcatcg ggtgctctgc atacgttcga tgagctattc ggtgcaagga
1001 tccacagcca tggtaatctc gctatagttc cctctctgaa agaccgtttc
1051 tacatacgac acgtgttcaa gcgtgtgttg tccgtggaga aggataccct
1101 gatggtggac gtagaaggga ccaccactct atctaccagg cgttttagtt
1151 gttggtcttc gtttaaggac gttgaccgtg agtcatgtaa tggcgtctat
1201 gctaacatca gcaagaacgc cctattagtt tattactgct ggatgtcgga
1251 taatatgtcc aaggcatcga catttgtaac gtttgacctc gattatgttg
1301 ggtaaattgg aaatgtaata cgagcttaat gctaatgacc atatttatat
1351 tcattaataa atagacatgt tcctctacag taatctcatt gcaatgattt
1401 gggttgagaa ggggtacagt tgctgttaat acattcctgg gccgtagccc
1451 taactagttc gtttagttgg gccattgaca tggttatgtt ggattgggcc
1501 ctctgagcac ccactattga ggccgagtca cctgggtcta gacagctggt
1551 tcccagcctg tgcagttgcc tgtatgggtg cgtcgcgttt tctatgtcgg
1601 agtctgcgtc tgactgactg attcctatag tgctcctgac agcccatgac
1651 tctccaggcc tgatttcaat tgggctcggc agcccaacac cagatatgga
1701 cgcggacctg atcatcttcc tctcccactt tccgtagccc acgtggctga
1751 agtcgatgtc cttctctgta aactgcttgg acaggatctt cactgttgga
1801 gctcggaaag gtatgtccac agagtgtttc gccgttgaca gcttcaactt
1851 tcccttgaat ttcgcgaagt gggtcctctg atggacgttc gtatcgcaca
1901 ctctgtagta caatttccat ggaattgggt ccttgaggga gaagaaggac
1951 gaggaaaagt aatggaggtc gatgttgcat ctgatcggaa acgtccacga
2001 cgcctgtagc gactcgttgt cagtcatcct cttgtcatgg atctccacga
2051 cgactgaacc cacggcgtta atgggtacct gctgtctgta ttctatgacg
2101 cagtggtcta ttttcataca gctgcgactg agccttgcgc ttaattgtga
2151 cgccgtggaa ggaaattgaa gaagaatctc cgtcaggtca tgagaaagct
2201 gatattcatc acgctgcgac tcaatgtaat tgaatgcgtt tggaggattg
2251 actagctgag attccattga attctattat caaaaatagg ccgcgcagcg
2301 gcaacgatgg agaaaattga acaggtgaaa cgaataggtc tgaaagactt
2351 tagggtttat cttgttggag gaaagagtaa agtggagaag atgataatga
2401 agacgagtcg ggtcgggcta ttactggacg gattgagagg agatattgtc
2451 caattgaggt gtttcatttg gggactcgtc ttattcctcc ttatatagag
2501 gctgagtacg gagtggcata tttgtaaata aaggggtgca ccccaattga
2551 gagctcgctc tataagtctt atgtattggg gtaaagggta caatatatag
2601 tagaacttcc taagggacta gtagcggcca tccttactaa tatt