Sequence of DPV Sugarcane yellow leaf virus

Sugarcane yellow leaf virus isolate Mile1 coat protein and movement protein genes, complete cds.

ACC No: HM640266

Dated: 2011-01-27 | Length: 591 | CRC: -1047423828

                
ID   HM640266; SV 1; linear; genomic RNA; STD; VRL; 591 BP.
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AC   HM640266;
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DT   26-JAN-2011 (Rel. 107, Created)
DT   27-JAN-2011 (Rel. 107, Last updated, Version 2)
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DE   Sugarcane yellow leaf virus isolate Mile1 coat protein and movement protein
DE   genes, complete cds.
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KW   .
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OS   Sugarcane yellow leaf virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Luteoviridae;
OC   Polerovirus.
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RN   [1]
RP   1-591
RA   Wang M.Q., Li W.F., Huang Y.K., Lu W.J., Wang X.Y., Luo Z.M.;
RT   "Molecular Detection and CP Gene Sequences Analysis of Sugarcane Yellow
RT   Leaf Virus in Sugarcane Area of Yunnan";
RL   Unpublished.
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RN   [2]
RP   1-591
RA   Wang M.Q., Li W.F., Huang Y.K., Lu W.J., Wang X.Y., Luo Z.M.;
RT   ;
RL   Submitted (07-JUL-2010) to the EMBL/GenBank/DDBJ databases.
RL   Yunnan Academy of Agricultural Sciences, Sugarcane Research Institute,
RL   Kaiyuan Lingquan East Road 363, Kaiyuan, Yunnan 661600, China
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FH   Key             Location/Qualifiers
FH
FT   source          1. .591
FT                   /organism="Sugarcane yellow leaf virus"
FT                   /host="Saccharum hybrid cultivar Mintang 69-421"
FT                   /isolate="Mile1"
FT                   /mol_type="genomic RNA"
FT                   /country="China:Mile"
FT                   /collection_date="Dec-2009"
FT                   /db_xref="taxon:94290"
FT   CDS             1. .591
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /protein_id="ADV76322.1"
FT                   /translation="MNTGANRSRRNVRRRANRRRQTRPVVVVRAPPGPRRVRRRRARVG
FT                   GNAVRGPGGRSNRDVLTFTVDDLKANSTGILKFGPNLSQYAAFNNGLLKAYHEYKITSL
FT                   TIQYNSCSSDATPGAIALEVDTSCSQTTTGSKITSFPVKRNAKKVFPAPFIRGKDFMTT
FT                   SADQFWLLYKGNGDSSLAGQFVCRFECPFQNPK"
FT   CDS             32. .484
FT                   /codon_start=1
FT                   /product="movement protein"
FT                   /protein_id="ADV76323.1"
FT                   /translation="MSEDALTVVDRLGQWSWSGLPQDLDEYDDVEHVLEETLCEDREEE
FT                   ATGMFSLSRLTISKPIQPGSSNSDRTYLSTQRSTMAYSKPTMSIKSQVSLFSITHAPPT
FT                   QLQVQSHLKWIHPAPKQQQAPRLLASPSRGTPRKSSRPPSSGGKIS"
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SQ   Sequence 591 BP; 166 A; 162 C; 142 G; 121 T; 0 other;

hm640266 Length: 591  27-JAN-2011  Type: N  Check: 6785  ..

       1  atgaatacgg gcgctaaccg ctcacgaagg aatgtcagaa gacgcgctaa
      51  ccgtcgtaga cagactcggc cagtggtcgt ggtccgggct cccccaggac
     101  ctagacgagt acgacgacgt agagcacgtg ttggaggaaa cgctgtgcga
     151  ggaccgggag gaagaagcaa ccgggatgtt ctcactttca cggttgacga
     201  tctcaaagcc aattcaaccg ggatcctcaa attcggaccg aacttatctc
     251  agtacgcagc gttcaacaat ggcttactca aagcctacca tgagtataaa
     301  atcacaagtc tcactattca gtataactca tgctcctccg acgcaactcc
     351  aggtgcaatc gcacttgaag tggatacatc ctgctcccaa acaacaacag
     401  gctccaagat tactagcttc cccgtcaaga ggaacgccaa gaaagtcttc
     451  ccggccccct tcatcagggg gaaagatttc atgactacgt cagctgacca
     501  gttttggttg ctgtacaaag ggaatggaga ctcgagccta gcaggacaat
     551  tcgtctgccg atttgaatgc cctttccaga atcccaaata g