Sequence of DPV Okra yellow mosaic Mexico virus
Okra yellow mosaic Mexico virus isolate Iguala-13-14 segment DNA-A, complete sequence.
ACC No: HQ020409
Dated: 2010-12-13 | Length: 2609 | CRC: 1041904456
ID HQ020409; SV 1; linear; genomic DNA; STD; VRL; 2609 BP.
XX
AC HQ020409;
XX
DT 13-DEC-2010 (Rel. 107, Created)
DT 13-DEC-2010 (Rel. 107, Last updated, Version 1)
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DE Okra yellow mosaic Mexico virus isolate Iguala-13-14 segment DNA-A,
DE complete sequence.
XX
KW .
XX
OS Okra yellow mosaic Mexico virus
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus;
OC unclassified Begomovirus.
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RN [1]
RP 1-2609
RA Santiago-Basilio R., Valadez-Moctezuma E., Marban-Mendoza N.;
RT "First Report of Okra yellow mosaic Mexico virus in okra in Iguala,
RT Mexico";
RL Unpublished.
XX
RN [2]
RP 1-2609
RA Santiago-Basilio R., Valadez-Moctezuma E., Marban-Mendoza N.;
RT ;
RL Submitted (04-AUG-2010) to the EMBL/GenBank/DDBJ databases.
RL Fitotecnia, Universidad Autonoma Chapingo, Km. 38.5 Carretera
RL Mexico-Texcoco, Chapingo, Estado de Mexico 56230, Mexico
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FH Key Location/Qualifiers
FH
FT source 1. .2609
FT /organism="Okra yellow mosaic Mexico virus"
FT /segment="DNA-A"
FT /host="Abelmoschus esculentus"
FT /isolate="Iguala-13-14"
FT /mol_type="genomic DNA"
FT /country="Mexico:Guerrero"
FT /collection_date="2007"
FT /db_xref="taxon:327280"
FT gene 195. .947
FT /gene="AV1"
FT CDS 195. .947
FT /codon_start=1
FT /gene="AV1"
FT /product="coat protein"
FT /protein_id="ADR72665.1"
FT /translation="MPKRDLPWRSIAGTSKVSRNANYSPRAGSGPRIIRPRMDRVAYVQ
FT EAQDLPDNENARRARGCEGPCKVQSFEQRHDVSHVGKVICISDVTRGNGITHRVGKRFC
FT VKSVYILGKIWMDENIKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNMFDNEPSTATVK
FT NDLRDRYQVMHKFYGKVTGGQYASNEQAIVKRFWKVNNHVVYNHQEAGKYENHTENALL
FT LYMACTHASNPVYATLKIRIYFYDSIMN"
FT gene complement(944. .1342)
FT /gene="AC3"
FT CDS complement(944. .1342)
FT /codon_start=1
FT /gene="AC3"
FT /product="replication enhancer protein"
FT /protein_id="ADR72666.1"
FT /translation="MDSRTGELITAPQSENGVYIWEIENPLYFKMYRVEDPLYTRTRVY
FT HVQIRFNHNLRRALHLHKAYLNFQVWTTSMTASGSTYLARFMHLVNLYLDRLGVISLNN
FT VIRAVRFATDRSYVNHVLENHSIKFKLY"
FT gene complement(1089. .1478)
FT /gene="AC2"
FT CDS complement(1089. .1478)
FT /codon_start=1
FT /gene="AC2"
FT /product="transcription activator protein"
FT /protein_id="ADR72667.1"
FT /translation="MRSSSPSHPPSIKTAHRQAKRRAIRRRRIDLECGCSIYLHIGCTG
FT HGFTHRGTHHCTSEREWRLYLGDRKSPVFQDVPSRRSTIHEDQSIPRTNTVQPQPEESV
FT ASPQGLPELPSLDDIDDSFWVDLFS"
FT gene complement(1390. .2475)
FT /gene="AC1"
FT CDS complement(1390. .2475)
FT /codon_start=1
FT /gene="AC1"
FT /product="replication initiator protein"
FT /protein_id="ADR72668.1"
FT /translation="MPPPRKFRVQSKNYFLTYPQCSLSKEEALSQLQTLETPVNKKFIK
FT ICRELHENGEPHLHVLIQFEGKYQCTNNRFFDLVSPTRSAHFHPNIQGAKSSSDVKSYI
FT DKDGDTIEWGQFQIDGRSARGGQQSANDSYAKALNAGSVQAAMTILQEEQPKDFLLQHH
FT NIRNNLERIFAKAPEPWVPPFQLSSFTNVPDEMQEWVDEYFGRDPAARPERPVSIIVEG
FT DSRTGKTMWARALGPHNYLSGHLDFNPRVYSNEVEYNVIDDVAPHYLKLKHWKELIGAQ
FT KDWQSNCKYGKPVQIKGGIPSIVLCNPGEGASYKDFLDKEENASLRNWTIKNALFITLT
FT SALYQDSTQASQEESHQEEAD"
FT gene complement(2061. .2324)
FT /gene="AC4"
FT CDS complement(2061. .2324)
FT /codon_start=1
FT /gene="AC4"
FT /product="symptom expression protein"
FT /protein_id="ADR72669.1"
FT /translation="MRMGSLISTFSSNSRASTSARITDSSIWCPQPGQHISIRTYRELN
FT PAPTSSPTSTRTGIQLNGDNSRSTADLRGEVSSQLTIHMPRH"
XX
SQ Sequence 2609 BP; 623 A; 595 C; 639 G; 752 T; 0 other;
hq020409 Length: 2609 13-DEC-2010 Type: N Check: 3242 ..
1 accggatggc cgcgcgattt ttttcccccc ctcgtgcgtt cgcctctctt
51 taatttgaat taaagcgttc cgctttcgtc tcgtccaatc aggtaacgtc
101 tgacgagcta agatatttca aacaacttgg gcgccaagtt gttgggtttc
151 ggttataaat taaagaggct ttggcccact ggatttaatt caaaatgcct
201 aagcgcgatc tgccgtggcg ctcgatcgcg ggaacctcaa aggtgagccg
251 caatgctaat tattctcctc gtgcaggaag tgggccaaga ataatcaggc
301 ctcgaatgga ccgggttgcc tatgtacagg aagcccagga tctaccggac
351 aatgagaacg cccgacgtgc cagaggctgt gaagggcctt gcaaggtcca
401 gtcctttgaa cagcgtcatg atgtctctca cgtgggtaag gtcatttgta
451 tatctgatgt gacacgtggt aatggtatca ctcaccgtgt aggtaagcgt
501 ttctgtgtta agtccgtcta cattttgggt aagatctgga tggatgagaa
551 catcaagctc aagaaccaca cgaacagtgt catgttctgg ttggtcaggg
601 atcgtagacc gtatggcacg cccatggatt tcggtcaggt gttcaacatg
651 ttcgacaacg agcccagtac tgccacggtg aagaacgacc tgcgcgaccg
701 ctaccaggtg atgcacaagt tttacggcaa ggtgacaggt ggacagtatg
751 ccagcaacga gcaggcgata gtcaagcgct tctggaaggt caacaatcat
801 gtggtctata atcatcagga agctggcaag tacgagaatc acacggagaa
851 cgctttgtta ctgtatatgg catgcactca tgcctctaac cctgtatatg
901 caacgcttaa gattcggatc tacttctacg attcgatcat gaattaataa
951 agtttgaatt ttattgaatg attttccagt acatgattta cataagatct
1001 atccgttgcg aaacgaacag ctctgattac attgttaagt gaaattacgc
1051 ctaatcgatc taaatacaaa ttaactaagt gcataaacct agctaaataa
1101 gtcgacccag aagctgtcat cgatgtcgtc cagacttgga agttcaggta
1151 ggccttgtgg agatgcaacg ctctcctcag gttgtggttg aaccgtattt
1201 gtacgtggta tactctggtc ctcgtgtata gtggatcttc tactcggtac
1251 atcttgaaat acaggggatt ttctatctcc cagatataga cgccattctc
1301 gctctgaggt gcagtgatga gttcccctgt gcgtgaatcc atgacccgta
1351 cagcctatgt gtaagtatat ggagcacccg cactccagat caatccgcct
1401 cctcctgatg gctctcctct tggcttgcct gtgtgctgtc ttgatagagg
1451 gcggatgtga gggtgatgaa gagcgcattc ttgatggtcc agttcctgag
1501 tgatgcgttt tcctctttgt cgaggaaatc tttatagctt gcaccctcac
1551 ctggattgca aagcacgatt gatgggatac ctcctttaat ttgaactggc
1601 ttgccgtatt tgcaatttga ctgccaatcc ttttgggccc cgatcaattc
1651 tttccagtgc tttagcttta gatagtgcgg tgcgacgtcg tcaatgacgt
1701 tatactccac ttcgtttgaa tagactcgtg ggttgaagtc caggtgtcca
1751 ctgaggtagt tatgtgggcc tagcgcacgt gcccacatcg tcttccctgt
1801 cctcgaatca ccttcaacga tgatactaac tggtctctca ggccgcgcag
1851 cgggatccct tccaaaatat tcatcgaccc actcttgcat ctcgtcaggc
1901 acgttagtga acgaggagag ttgaaacgga gggacccatg gttccggagc
1951 ctttgcgaat attctttcta ggttgttgcg gatgttatga tgctgcagga
2001 gaaaatcttt tggctgttct tcctgcaaaa tcgtcatggc agcttgaaca
2051 gatccagcat tcaatgcctt ggcatatgaa tcgttagctg actgctgacc
2101 tcccctcgca gatctgccgt cgatctggaa ttgtccccat tcaattgtat
2151 ccccgtcctt gtcgatgtag gacttgacgt cggagctgga tttagctccc
2201 tgtatgttcg gatggaaatg tgctgacctg gttggggaca ccagatcgaa
2251 gaatctgtta ttcgtgcact ggtacttgcc ctcgaattgg atgagaacgt
2301 ggagatgagg ctccccattc tcatgaagct ctctgcagat cttgataaat
2351 ttcttgttaa ccggagtttc tagggtttgt aattgggaaa gtgcttcttc
2401 tttgctgaga gaacactggg gatatgtgag gaaatagttt tttgactgaa
2451 ctctaaattt cctaggcggt ggcatttttg taataagaaa gggtactcca
2501 gttgagctcc tctcaaactt gctgtatgtt ttggagtatt agagtactat
2551 atatactaaa actctcattt acggatttgc aacacctggc ggccatccgc
2601 tataatatt